More than 300 homologs were found in PanDaTox collection
for query gene Ksed_04260 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_04260  selenocysteine-specific translation elongation factor  100 
 
 
630 aa  1182    Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.974892 
 
 
-
 
NC_013172  Bfae_09660  selenocysteine-specific translation elongation factor SelB  53.8 
 
 
594 aa  508  9.999999999999999e-143  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3580  selenocysteine-specific translation elongation factor  50.79 
 
 
597 aa  501  1e-140  Gordonia bronchialis DSM 43247  Bacteria  normal  0.144942  n/a   
 
 
-
 
NC_013235  Namu_5282  selenocysteine-specific translation elongation factor  51.98 
 
 
603 aa  449  1e-125  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3739  selenocysteine-specific translation elongation factor  50.08 
 
 
591 aa  426  1e-118  Streptosporangium roseum DSM 43021  Bacteria  normal  0.267457  normal  0.0215815 
 
 
-
 
NC_009380  Strop_0585  selenocysteine-specific translation elongation factor  46.17 
 
 
604 aa  423  1e-117  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_5688  selenocysteine-specific translation elongation factor  43.68 
 
 
596 aa  402  1e-111  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_16940  selenocysteine-specific translation elongation factor SelB  47.62 
 
 
583 aa  397  1e-109  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.213421  normal  0.332319 
 
 
-
 
NC_009077  Mjls_5596  selenocysteine-specific translation elongation factor SelB  48.32 
 
 
570 aa  389  1e-107  Mycobacterium sp. JLS  Bacteria  normal  normal  0.436165 
 
 
-
 
NC_008146  Mmcs_5216  selenocysteine-specific translation elongation factor SelB  48.19 
 
 
565 aa  391  1e-107  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5304  selenocysteine-specific translation elongation factor SelB  48.19 
 
 
565 aa  391  1e-107  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1609  selenocysteine-specific translation elongation factor  50.08 
 
 
592 aa  370  1e-101  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.00274318  normal 
 
 
-
 
NC_013510  Tcur_2264  selenocysteine-specific translation elongation factor  45.25 
 
 
580 aa  360  6e-98  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000107455  n/a   
 
 
-
 
NC_013757  Gobs_1632  selenocysteine-specific translation elongation factor  46.9 
 
 
586 aa  359  7e-98  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.318083  n/a   
 
 
-
 
NC_013525  Tter_1385  selenocysteine-specific translation elongation factor  32.04 
 
 
619 aa  240  5.999999999999999e-62  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009253  Dred_2185  selenocysteine-specific translation elongation factor  30.53 
 
 
635 aa  234  4.0000000000000004e-60  Desulfotomaculum reducens MI-1  Bacteria  normal  0.573253  n/a   
 
 
-
 
NC_010424  Daud_1094  selenocysteine-specific translation elongation factor  31.8 
 
 
635 aa  229  1e-58  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1123  selenocysteine-specific translation elongation factor  31.3 
 
 
627 aa  225  2e-57  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0034  selenocysteine-specific translation elongation factor  32.87 
 
 
636 aa  222  9.999999999999999e-57  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007517  Gmet_3415  selenocysteine-specific translation elongation factor SelB  47.27 
 
 
636 aa  220  7.999999999999999e-56  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_0769  selenocysteine-specific translation elongation factor  34.01 
 
 
629 aa  219  1e-55  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.709604  n/a   
 
 
-
 
NC_013385  Adeg_0673  selenocysteine-specific translation elongation factor  46.59 
 
 
635 aa  214  3.9999999999999995e-54  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0035  selenocysteine-specific translation elongation factor  32.41 
 
 
636 aa  214  3.9999999999999995e-54  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2503  selenocysteine-specific translation elongation factor SelB  50 
 
 
634 aa  213  7e-54  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.00650537  normal  0.143065 
 
 
-
 
NC_010718  Nther_1114  selenocysteine-specific translation elongation factor  26.92 
 
 
633 aa  213  1e-53  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.366063 
 
 
-
 
NC_013223  Dret_0762  selenocysteine-specific translation elongation factor  30.63 
 
 
634 aa  212  2e-53  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.97012  normal 
 
 
-
 
NC_002939  GSU0102  selenocysteine-specific translation elongation factor  44.36 
 
 
636 aa  209  1e-52  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_1220  selenocysteine-specific translation elongation factor  28.9 
 
 
642 aa  208  2e-52  Syntrophobacter fumaroxidans MPOB  Bacteria  hitchhiker  0.00584658  normal  0.153868 
 
 
-
 
NC_008261  CPF_2372  selenocysteine-specific translation elongation factor  23.77 
 
 
635 aa  203  8e-51  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_1693  selenocysteine-specific translation elongation factor  41.23 
 
 
643 aa  203  9.999999999999999e-51  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.986647 
 
 
-
 
NC_013216  Dtox_1647  selenocysteine-specific translation elongation factor  27.25 
 
 
644 aa  202  1.9999999999999998e-50  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.00236334  hitchhiker  0.000000010303 
 
 
-
 
NC_008262  CPR_2084  selenocysteine-specific translation elongation factor  24.43 
 
 
635 aa  202  1.9999999999999998e-50  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2560  selenocysteine-specific translation elongation factor  41.52 
 
 
631 aa  201  5e-50  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.475206  n/a   
 
 
-
 
NC_007498  Pcar_0832  selenocysteine-specific translation elongation factor  43.43 
 
 
637 aa  199  1.0000000000000001e-49  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3567  selenocysteine-specific translation elongation factor  43.84 
 
 
636 aa  199  1.0000000000000001e-49  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0164  selenocysteine-specific translation elongation factor  43.53 
 
 
636 aa  197  4.0000000000000005e-49  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_2869  selenocysteine-specific translation elongation factor  32.63 
 
 
655 aa  196  1e-48  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0571166  n/a   
 
 
-
 
NC_009943  Dole_0653  selenocysteine-specific translation elongation factor  41.11 
 
 
636 aa  195  2e-48  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0190681  n/a   
 
 
-
 
NC_007519  Dde_3173  selenocysteine-specific translation elongation factor SelB  31.49 
 
 
644 aa  195  2e-48  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE1963  selenocysteine-specific translation elongation factor  29.25 
 
 
590 aa  194  3e-48  Treponema denticola ATCC 35405  Bacteria  normal  0.387563  n/a   
 
 
-
 
NC_013170  Ccur_11400  selenocysteine-specific elongation factor SelB  37.89 
 
 
657 aa  194  4e-48  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_4266  selenocysteine-specific translation elongation factor  35.11 
 
 
634 aa  191  2e-47  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_4628  selenocysteine-specific translation elongation factor SelB  32.26 
 
 
628 aa  192  2e-47  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.889697 
 
 
-
 
NC_009901  Spea_0443  selenocysteine-specific translation elongation factor  35.85 
 
 
635 aa  191  2.9999999999999997e-47  Shewanella pealeana ATCC 700345  Bacteria  normal  0.363793  n/a   
 
 
-
 
NC_008751  Dvul_2441  selenocysteine-specific translation elongation factor  46.04 
 
 
642 aa  189  1e-46  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_25300  selenocysteine-specific elongation factor SelB  36.77 
 
 
641 aa  188  2e-46  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.291858 
 
 
-
 
NC_009675  Anae109_4150  selenocysteine-specific translation elongation factor  46.07 
 
 
649 aa  189  2e-46  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  hitchhiker  0.00997007 
 
 
-
 
NC_007760  Adeh_0419  selenocysteine-specific translation elongation factor SelB  33.77 
 
 
649 aa  187  6e-46  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2019  selenocysteine-specific translation elongation factor  29.29 
 
 
634 aa  185  2.0000000000000003e-45  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0284313  n/a   
 
 
-
 
NC_010002  Daci_3485  selenocysteine-specific translation elongation factor  31.72 
 
 
643 aa  183  8.000000000000001e-45  Delftia acidovorans SPH-1  Bacteria  normal  0.035122  normal 
 
 
-
 
NC_007298  Daro_1810  selenocysteine-specific translation elongation factor SelB  30.99 
 
 
627 aa  183  9.000000000000001e-45  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.251758 
 
 
-
 
NC_008463  PA14_63530  selenocysteine-specific elongation factor  31.95 
 
 
641 aa  182  1e-44  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.440984  normal 
 
 
-
 
NC_011891  A2cp1_0448  selenocysteine-specific translation elongation factor  33.53 
 
 
649 aa  181  4e-44  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0447  selenocysteine-specific translation elongation factor  33.38 
 
 
649 aa  180  9e-44  Anaeromyxobacter sp. K  Bacteria  normal  0.436923  n/a   
 
 
-
 
NC_013440  Hoch_6613  selenocysteine-specific translation elongation factor  43.38 
 
 
648 aa  179  1e-43  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0913819 
 
 
-
 
NC_009656  PSPA7_5526  selenocysteine-specific elongation factor  37.11 
 
 
641 aa  178  3e-43  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_2086  selenocysteine-specific translation elongation factor  39.71 
 
 
657 aa  177  6e-43  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0347898  n/a   
 
 
-
 
NC_004347  SO_0106  selenocysteine-specific translation elongation factor  42.74 
 
 
673 aa  175  1.9999999999999998e-42  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_0110  selenocysteine-specific translation elongation factor  43.48 
 
 
681 aa  175  1.9999999999999998e-42  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0105  selenocysteine-specific translation elongation factor  43.48 
 
 
681 aa  175  2.9999999999999996e-42  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2506  selenocysteine-specific translation elongation factor  43.07 
 
 
650 aa  175  2.9999999999999996e-42  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011663  Sbal223_0109  selenocysteine-specific translation elongation factor  43.03 
 
 
681 aa  174  2.9999999999999996e-42  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0107  selenocysteine-specific translation elongation factor SelB  42.17 
 
 
673 aa  175  2.9999999999999996e-42  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0102  selenocysteine-specific translation elongation factor SelB  41.67 
 
 
673 aa  173  7.999999999999999e-42  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1982  selenocysteine-specific translation elongation factor SelB  32.42 
 
 
612 aa  172  2e-41  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.869997  n/a   
 
 
-
 
NC_008321  Shewmr4_0107  selenocysteine-specific translation elongation factor SelB  40.87 
 
 
673 aa  172  2e-41  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0141  selenocysteinyl-tRNA-specific translation factor  40.79 
 
 
621 aa  172  2e-41  Enterobacter sp. 638  Bacteria  normal  0.645753  normal  0.973594 
 
 
-
 
NC_009832  Spro_0091  selenocysteinyl-tRNA-specific translation factor  37.43 
 
 
615 aa  171  5e-41  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2825  selenocysteine-specific translation elongation factor  40.77 
 
 
643 aa  170  7e-41  Paracoccus denitrificans PD1222  Bacteria  normal  0.518854  normal 
 
 
-
 
CP001637  EcDH1_0118  selenocysteine-specific translation elongation factor  41.44 
 
 
614 aa  169  2e-40  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3795  selenocysteinyl-tRNA-specific translation factor  41.44 
 
 
614 aa  169  2e-40  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0832  translation elongation factor, selenocysteine-specific  27.49 
 
 
611 aa  167  4e-40  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.5118  n/a   
 
 
-
 
NC_011094  SeSA_A3882  selenocysteinyl-tRNA-specific translation factor  41.6 
 
 
616 aa  167  4e-40  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_4088  selenocysteinyl-tRNA-specific translation factor  41.06 
 
 
614 aa  167  4e-40  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_4961  selenocysteinyl-tRNA-specific translation factor  41.06 
 
 
614 aa  167  5e-40  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.503297  normal 
 
 
-
 
CP001509  ECD_03445  selenocysteinyl-tRNA-specific translation factor  41.89 
 
 
614 aa  167  6.9999999999999995e-40  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_03396  hypothetical protein  41.89 
 
 
614 aa  167  6.9999999999999995e-40  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3960  selenocysteinyl-tRNA-specific translation factor  41.6 
 
 
616 aa  167  8e-40  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.293877  normal  0.449434 
 
 
-
 
NC_010498  EcSMS35_3918  selenocysteinyl-tRNA-specific translation factor  41.51 
 
 
614 aa  166  1.0000000000000001e-39  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.696319 
 
 
-
 
NC_010468  EcolC_0123  selenocysteinyl-tRNA-specific translation factor  41.89 
 
 
614 aa  165  2.0000000000000002e-39  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4067  selenocysteinyl-tRNA-specific translation factor  40.51 
 
 
616 aa  165  3e-39  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C4005  selenocysteinyl-tRNA-specific translation factor  41.22 
 
 
616 aa  165  3e-39  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.187255 
 
 
-
 
NC_012039  Cla_1287  selenocysteine-specific elongation factor  23.33 
 
 
601 aa  165  3e-39  Campylobacter lari RM2100  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B3896  selenocysteinyl-tRNA-specific translation factor  41.22 
 
 
616 aa  165  3e-39  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1381  selenocysteine-specific elongation factor  29.07 
 
 
601 aa  165  3e-39  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.390422  n/a   
 
 
-
 
NC_014150  Bmur_0487  selenocysteine-specific translation elongation factor  34.46 
 
 
605 aa  164  5.0000000000000005e-39  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE1570  selenocysteine-specific elongation factor  30.37 
 
 
601 aa  163  8.000000000000001e-39  Campylobacter jejuni RM1221  Bacteria  normal  0.475266  n/a   
 
 
-
 
NC_009707  JJD26997_0272  selenocysteine-specific elongation factor  30 
 
 
601 aa  162  1e-38  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.350191  n/a   
 
 
-
 
NC_007492  Pfl01_2707  selenocysteine-specific translation elongation factor SelB  40.3 
 
 
636 aa  163  1e-38  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.285696 
 
 
-
 
NC_010658  SbBS512_E4005  selenocysteinyl-tRNA-specific translation factor  41.13 
 
 
614 aa  162  2e-38  Shigella boydii CDC 3083-94  Bacteria  normal  0.799296  n/a   
 
 
-
 
NC_011666  Msil_3332  selenocysteine-specific translation elongation factor  42.7 
 
 
691 aa  162  2e-38  Methylocella silvestris BL2  Bacteria  n/a    normal  0.665581 
 
 
-
 
NC_009802  CCC13826_0756  selenocysteine-specific translation elongation factor  35.02 
 
 
606 aa  160  5e-38  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_4377  selenocysteine-specific translation elongation factor  31.08 
 
 
641 aa  159  2e-37  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.574205  n/a   
 
 
-
 
NC_008543  Bcen2424_3989  selenocysteine-specific translation elongation factor  31.08 
 
 
641 aa  159  2e-37  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3539  selenocysteine-specific translation elongation factor  31.08 
 
 
641 aa  159  2e-37  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.791284  normal 
 
 
-
 
NC_007650  BTH_II0712  selenocysteine-specific translation elongation factor  38.06 
 
 
641 aa  157  4e-37  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_0549  selenocysteine-specific translation elongation factor  35.38 
 
 
640 aa  157  4e-37  Pseudomonas putida W619  Bacteria  normal  normal  0.177696 
 
 
-
 
NC_010322  PputGB1_0537  selenocysteine-specific translation elongation factor  29.79 
 
 
640 aa  157  6e-37  Pseudomonas putida GB-1  Bacteria  normal  0.82907  normal 
 
 
-
 
NC_009075  BURPS668_A2391  translation elongation factor, selenocysteine-specific  37.72 
 
 
651 aa  156  1e-36  Burkholderia pseudomallei 668  Bacteria  normal  0.451398  n/a   
 
 
-
 
NC_007952  Bxe_B2548  selenocysteine-specific translation elongation factor SelB  33.25 
 
 
637 aa  155  1e-36  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.88579 
 
 
-
 
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