| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5282 |
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| Symbol | |
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| ID | 8450915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | + |
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| Start bp | 5899421 |
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| End bp | 5901232 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 645044315 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_003204537 |
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| Protein GI | 258655381 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00475] selenocysteine-specific elongation factor SelB |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCGACC CCGCCCACGT CGTGGCCACC GCGGGCCACG TCGACCACGG CAAGAGCACG
CTGGTCCGCG CGCTGACCGG GATGGAGCCG GACCGCTGGG CCGAGGAACG CCGGCGCGGC
CTGACCATCG ACCTGGGGTT CGCCTGGACG ACCCTGCCCT CCGGCCGGCC GGTCGCGTTC
GTCGACGTGC CCGGGCACGA ACGGTTCCTG GGCAACATGC TGGCCGGGCT CGGCCCGGTG
CCGGTGGTCG TGTTCGTGGT GGCCGCCGAC GAGGGCTGGC GGGCGCAGTC GAGCGATCAT
CGGGACGCGG TGGCCGCGCT GGCCATCGAG CACGGGCTGA TCGTCATCAG CCGGGCCGAC
CGGGCGGCCG ACGGTGGCAC GTCGGCGTTG CGGCAGACCC GGGCCGAACT GGCCACGACC
GGGTTGGACG AGGCTCCCGC GGTCACCGTC TCCGCGGTCA CCGGCACCGG TCTGGCCGAG
CTGCGGACCG CGCTGGACGG CGTCCTGGCC GCCGTACCGG CCCCGGTGAG CTCCGGCCGG
CTGCGGCTGT GGATCGACCG GTCGTTCACC GTCGGCGGGG CCGGCACGGT GGTCACCGGC
ACGCTGGCCG CCGGCACCCT GAGCCGGGGC ATGCCGCTGC AGGTGCTGGG CCCCGGCTCA
CTCCGCGACG TCGCCGTCCG CGGGCTGCAG AGCCGGGGCC AGACCCACGC CACCCTCACC
CCGGTCGACC GGGTCGCCCT GAACCTGCGC GGGGTGCCGG TCGATCAGGT CCACCGCGGC
GACGTCCTGC TCACCCCGGA CGCCTGGCCG GTCACCGCCC TGCTGGAGGT GCGCCGCACG
TCCGGGGCGC CGTTCACCGA GGCCCCCGAA CACCTGACCG TGCACGTGGG CACGGCGGCC
CTGCCGGCCC GGGTGCGCCC GTACGACGAC GACCATGCCC GGATCACCCT GGACCGCCGG
CTGCCGCTGG TGGTGGGCGA TCGGCTGGTG TTGCGCCATC CGGGCAGCCG CCGGGTGCTG
GGCGGGGCGC AGGTCCTGGA CGCCGAACCC CCGGCGCTGC GCCGTCGGGG CGACGCCGCG
CGCCGGCTGG CCGTGGTGGC GCGGCTGGAC CCCCGCGGCG ATGTGGCGGC CGAGGTCGCC
CGGCGGGGGG CGGTGCCGGT GGCGCACCTG GGCCGGCTCG GCCTGCTGGA CGCCACCGCC
ACGCCGCCGC CGCAGGTCCG GGCGGTGGAC CGGTGGTGGG TGCACGCACC GACCTTCCAG
GCCTGGACGA CCCGGCTGCG CACGGCGGTC GAGGCCCTGC ACGACCGAGA TCCGCTGGCC
GGCGGCCTGT CTCGAGGCGC GGCGGCCGAC CTGCTGGCGC TGCCCGACCG CGACCTGCTG
GACGCGGTCG TGACGGCCGC CGACCTGGAC TACGCCGGTG GGCACATCCG GCTGCCCGGC
ACCGGTGACG AGCTCGGGCC GGCCGCCGCG GCCGTGGCCG AGCTGGAGAC CCGCCTGCGG
GCCGCCCCGT TCGCGGCGCC CGAGGCCGAT GACCTGGCGG CCCTGCAGCT GGGCGCGCGC
GAGCTGGCCG CGGCCGAGCG GGCCGGCCGG GTGCTGCGAT TGCGCGACGG GATCGTGCTG
CTGCCAACGG CTCCCGCGCT GGCGATGCGG GCTCTGTCCG GTCTGGACCA GCCGTTCACC
ACCAGCCAGG CTCGGGCCGC ACTGGCCACC ACCCGCCGGG TGGCGATCCC GCTGCTGGAG
CACCTGGACG CCCGGGGCTG GACGCGGCGG CTGGACGCCG GTCACCGCGA GGTCGCCCGG
CCGCACGCCT GA
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| Protein sequence | MPDPAHVVAT AGHVDHGKST LVRALTGMEP DRWAEERRRG LTIDLGFAWT TLPSGRPVAF
VDVPGHERFL GNMLAGLGPV PVVVFVVAAD EGWRAQSSDH RDAVAALAIE HGLIVISRAD
RAADGGTSAL RQTRAELATT GLDEAPAVTV SAVTGTGLAE LRTALDGVLA AVPAPVSSGR
LRLWIDRSFT VGGAGTVVTG TLAAGTLSRG MPLQVLGPGS LRDVAVRGLQ SRGQTHATLT
PVDRVALNLR GVPVDQVHRG DVLLTPDAWP VTALLEVRRT SGAPFTEAPE HLTVHVGTAA
LPARVRPYDD DHARITLDRR LPLVVGDRLV LRHPGSRRVL GGAQVLDAEP PALRRRGDAA
RRLAVVARLD PRGDVAAEVA RRGAVPVAHL GRLGLLDATA TPPPQVRAVD RWWVHAPTFQ
AWTTRLRTAV EALHDRDPLA GGLSRGAAAD LLALPDRDLL DAVVTAADLD YAGGHIRLPG
TGDELGPAAA AVAELETRLR AAPFAAPEAD DLAALQLGAR ELAAAERAGR VLRLRDGIVL
LPTAPALAMR ALSGLDQPFT TSQARAALAT TRRVAIPLLE HLDARGWTRR LDAGHREVAR
PHA
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