Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_2825 |
Symbol | |
ID | 4581156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 2841629 |
End bp | 2843560 |
Gene Length | 1932 bp |
Protein Length | 643 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639770152 |
Product | selenocysteine-specific translation elongation factor |
Protein accession | YP_916605 |
Protein GI | 119385549 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00475] selenocysteine-specific elongation factor SelB [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.518854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTCG GCACGGCAGG TCACATCGAC CATGGCAAGA CGGCGCTGGT CCGGGCGCTG ACCGGGGTCG AGACCGACCG GCTGGCCGAG GAAAAGGCCC GCGGCATCAC CATCGAGCTG GGCTTTGCCT ATGCCGATCT GGGCGGCGGC GGCGTGACGG GCTTCGTCGA CGTGCCGGGG CATGAGAAAT TCGTCCATAC CATGCTGGCC GGCGCCGGCG GCATCGACCT TGCCCTGCTG GTCGTCGCCG CCGATGACGG CATCATGCCG CAGACGCGCG AGCATCTGGC CATCCTGGAC CTTCTGGGCA TCACCCGCGG CATGGTCGCG CTGACCAAAT CCGACCTGGC GCCGCCCGAA CGCATCGCCC GGCTTTCCGC CGGGATCGCC GAATTGCTGG CCCCCACCGG CCTTGCCGGT GCGCCGGTCT TTCCGGTTTC GTCGCTGACC GGCGCGGGCA TCGACGCCTT GCGCGCCGCG CTGGTGCAGG CCGAGGCCGA AACCGGCGCC CGCGCTGCCG AGGCGTGCTT TCGCCTTACC ATCGACCGCA GCTTCACCCT GGCCGGGACG GGCACCGTCG TTACCGGCAC GGTGCTGTCG GGCCGGGTCG CCCTGGGCGA CCAGATCGCC ATCAGCCCCT TGGGCCTGCC GGCCCGGGTG CGCGGCATCC ACGCCCAGAG CCGCAAGGCC GAAGCCGGGC TTGCCGGCCA GCGCTGCGCC CTGAACCTTG CCGGCGAGGG GGTGACGCGC GATGCGATCC ACCGCGGAGA CGTGGCGCTG GACCCCGTGC TGCACGCGCC GACCCAGCGC ATCGACGTGA TCCTGCGCGC TCTGGAGGGC GAGCCCAAGC CGCTGGCCAC CTGGTTCCCC GCCCGCCTGC ATCTGGGTGC TGCCGAAACC GGCGCCCGCA TCGTGCCGCT GGAGGGGCCG CTGGCGCCGG GCGAGGAGGG GTTGGTGCAG CTTGTCCTGG ACCGTCCCTT GGCCGCGACC GTGGGCGAAC GCTTCATCCT GCGCGACGTT TCGGCCCGGC GCACAATCGG CGGCGGGCGG CTGGTCGACC TGCGCGCGCC CGCCCGCCAC CGCACCCGAC CCGAGCGTCT GGCCGTCCTG CGCGCCATGG CCCTGCCCGA TCCTGACAAG GCGCTGGCTG CCATGGCCGG GCTGGCGCTG GTCGACCTCG ACGCCTTCGC CCGCGACCGC GCCTTGTCGC CGGCCGAGCT TGACCGGGCC ATTGCCTCCT CGGGCATCGC CATCGTTCCG GGAACGCGGC AGGCGCTAAG CCCCGCCCGG CTGGGTGCGC TGCGCGAACG GATGCAAGCG GAACTGGCCG CCTTTCACGC CGAGAACGCC GATCTTCAGG GGCTGGGCCG GGAAAAGCTG CGGCTCTCGC TGGACCCGCG CCTGCCCAAG CCCGATTTCG CCGCCTTCCT GCGGGCCGAG GCGGCGGCGG GGCGCATCGC GCTGGACGGT GCCTTCATCC GCCTGCCCGG CCACCTGCCC CGCCTCTCGC CCGAGGACGA GGCTCTGCTG GAGCGCATCT TGCCGCGCCT TGTTGGCGAG GAACGCTTTC GCCCGCCGCG CGTGCGCGAC TTTGCCCAGG AATTCGGCGC CGACGAGCCC GAGGTCCGCC GCATCCTGCG CATGGCTGCG CGCCAGGGCC GCATCGACCA GATCGCCCAT GACCATTTCT TCGCCCGCGC CACCACGGTC GAGATGGTCG GCATCATCCG CGACATCGCG GCCCAGGCGC CGGAGGGCTG GTTCACCGCC CCGGATTTTC GCGACCGGGT GCGGAACGGG CGCAAGGTGG CGATCCAGAT CCTTGACTTC TTCGACCGGC TCGGTCTGAC CTTGCGTCGG GGCGATCTTC GTCGCATCAA CCCTCACCGG ATCGACCTGT TCACCCCGGA CGGGCCGGAC GGTCGGGGAT AG
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Protein sequence | MIVGTAGHID HGKTALVRAL TGVETDRLAE EKARGITIEL GFAYADLGGG GVTGFVDVPG HEKFVHTMLA GAGGIDLALL VVAADDGIMP QTREHLAILD LLGITRGMVA LTKSDLAPPE RIARLSAGIA ELLAPTGLAG APVFPVSSLT GAGIDALRAA LVQAEAETGA RAAEACFRLT IDRSFTLAGT GTVVTGTVLS GRVALGDQIA ISPLGLPARV RGIHAQSRKA EAGLAGQRCA LNLAGEGVTR DAIHRGDVAL DPVLHAPTQR IDVILRALEG EPKPLATWFP ARLHLGAAET GARIVPLEGP LAPGEEGLVQ LVLDRPLAAT VGERFILRDV SARRTIGGGR LVDLRAPARH RTRPERLAVL RAMALPDPDK ALAAMAGLAL VDLDAFARDR ALSPAELDRA IASSGIAIVP GTRQALSPAR LGALRERMQA ELAAFHAENA DLQGLGREKL RLSLDPRLPK PDFAAFLRAE AAAGRIALDG AFIRLPGHLP RLSPEDEALL ERILPRLVGE ERFRPPRVRD FAQEFGADEP EVRRILRMAA RQGRIDQIAH DHFFARATTV EMVGIIRDIA AQAPEGWFTA PDFRDRVRNG RKVAIQILDF FDRLGLTLRR GDLRRINPHR IDLFTPDGPD GRG
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