| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_0653 |
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| Symbol | |
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| ID | 5693483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 778789 |
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| End bp | 780699 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641263245 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_001528540 |
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| Protein GI | 158520670 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0190681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGACAGC TGATTCTGGG AACCGCCGGC CATATCGATC ACGGCAAATC CAGCTTTGTC
AAGGCCCTCA CCGGCACCGA CCCGGACCGT CTCAAGGAGG AGAAGGCCAG GGGCATCACC
ATTGAGCTGG GGTTTGCCTC CCTTACCCTT CCCGGCGGCC AGCAGGTGGG CATCGTGGAT
GTGCCCGGCC ATGAAAAGTT CATCAAGAAC ATGGTGGCCG GGGCTTCGGG CATCGACATG
GTGGCCATGG TGATCGCCGC CGACGAGGGG GTGATGCCCC AGACCCGGGA ACACATGGAC
ATCTGCACCC TGCTGGGCAT TGACCACGGC CTTGTGGTGC TGACCAAGAT CGACATGGTG
GACGAAGAGA TGCTGGAACT GGCCATGGCC GACGTGGAAG ACTTTACGCA AAACACCTTT
CTGGAGGGGG CCCCGGTGCT GCCCGTCTCC GCTGTTACAG GGGAGGGCAT TGCCGAGTTT
CCCGCGATCC TGGAACGCCT GGCCGCGAAT GTGCCGGACC GCAACCCCAC CGACCTGCTG
CGCATTCCCA TTGACCGGGT TTTTTCCATG AAAGGATTCG GCACGGTGAT TACCGGCACC
CTGGTGGCCG GCGCCGTGAC CGTGGGTGAA ACCGTGGAGC TTTACCCTTT TGACGTCCGG
ACCAGGGTGC GGGGCCTTCA GGTCCACAAC AGCAGCGTGG AGCGGGCCGA TGCCGGCCTG
CGCACCGCCA TCAACCTTCA GGGCCTGGAA AAAACCGAGA TCACCCGCGG CGGCGTGGTG
GGCCGGCCGG ACCAGCTTTT GCCCACCTAT ATGCTGGACA TCTATTTTCA CGCGTTGAAG
AGCAATGCAA GGCCCATCAA GCACCGTGCC CCGGTGCGGG TCCACTGCGG CACGGCCGAG
GTGATGGGCC AGATAATCCT GCTGGACCGG GAGACCCTTG ATCCCGGCCA GGACACCGTG
GTCCAGATTC GGTTAAAGGA GCCGGTGGTG TGCGTCAAGG ATGACCGGGT GGTGGTGCGC
AGTTATTCGC CGGTGCGCAC CATCGGCGGC GGCCCGGTGT TAAACCCGGT GCCGGTCAAG
CACCGGCGCA ACGATTCATC CCTGGTAGAG GCCATCGCAA ACCTGGCATC GGCCCCGCCC
GAGGCGGTCA TCGCCTTTCA CTGCGAGCAG GCCGGGTTTC GGGGCGTTTC ACTGCCCGCG
CTCCGGGTCA TGACCAACCT TCCGGACAAG GCCCTGACAA GGGCCATGGA CGGTTTGCTG
TCGGGCCAGA CCATTCTGCT GGTGGACCGG GAAAAACAGG TCTATGTTCA CAAAACGCTT
TTTGACAAAA CCGCTTTTGA GATGCGGGCC ATTCTCGACG CATTTCACCG GGACAACCCC
TTGAAAAAAG GCATGCCCCG GCAGGACATC AAATCCAGGA TCGCACGCCG GGCCGGTGAC
AAGCTGTTTG AGCGGGTGCT GGACCGCATG GTCAAAAAAA AGGAGGTGGT CCAGGATGGC
GACACCGTGC ACCTGTCCGG CCATGCCGTG GCCCTGGCCT CGGACCAGGG GAAAATCAGG
GAAGACCTGC TGAACCTGCT GGCCCAAAGC GGCCTTACAC CACCCACCCT CAAGGAGTTG
CCCGGGGCCA TCGGCACCCA GGATACCGGG GCGGTCCGCG AAGTGCTTTA CCTGCTGGTG
CAGCAGAAAG ACCTGGTAAG GGTCAAGGAC GATCTTTATT TTAATAGCGC TGTTCTCGAA
CGCCTTGAAT CCGAACTGGT TGATTTTTTA AATAAAAACG GAACAATCGA CGCGCCCCGG
TTCAAGGAGA TGACCGGCGC CTCCCGCAAA TACACCATCC CGTTGCTGGA ATATTTTGAC
GCGAAAAAGG TGACCATTCG CGTGGGGGAC ACCCGCAAGC TCAGGCAATG A
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| Protein sequence | MRQLILGTAG HIDHGKSSFV KALTGTDPDR LKEEKARGIT IELGFASLTL PGGQQVGIVD
VPGHEKFIKN MVAGASGIDM VAMVIAADEG VMPQTREHMD ICTLLGIDHG LVVLTKIDMV
DEEMLELAMA DVEDFTQNTF LEGAPVLPVS AVTGEGIAEF PAILERLAAN VPDRNPTDLL
RIPIDRVFSM KGFGTVITGT LVAGAVTVGE TVELYPFDVR TRVRGLQVHN SSVERADAGL
RTAINLQGLE KTEITRGGVV GRPDQLLPTY MLDIYFHALK SNARPIKHRA PVRVHCGTAE
VMGQIILLDR ETLDPGQDTV VQIRLKEPVV CVKDDRVVVR SYSPVRTIGG GPVLNPVPVK
HRRNDSSLVE AIANLASAPP EAVIAFHCEQ AGFRGVSLPA LRVMTNLPDK ALTRAMDGLL
SGQTILLVDR EKQVYVHKTL FDKTAFEMRA ILDAFHRDNP LKKGMPRQDI KSRIARRAGD
KLFERVLDRM VKKKEVVQDG DTVHLSGHAV ALASDQGKIR EDLLNLLAQS GLTPPTLKEL
PGAIGTQDTG AVREVLYLLV QQKDLVRVKD DLYFNSAVLE RLESELVDFL NKNGTIDAPR
FKEMTGASRK YTIPLLEYFD AKKVTIRVGD TRKLRQ
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