Gene CJE1570 details

Gene Information

• Locus tag: CJE1570
• Symbol: selB
• ID: 3232198
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni RM1221
• Kingdom: Bacteria
• Replicon accession: NC_003912
• Strand: +
• Start bp: 1472186
• End bp: 1473991
• Gene Length: 1806 bp
• Protein Length: 601 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 637292923
• Product: selenocysteine-specific elongation factor
• Protein accession: YP_179553
• Protein GI: 57238422
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG3276] Selenocysteine-specific translation elongation factor
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00475] selenocysteine-specific elongation factor SelB; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.475266
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTCTG TTATTATAGG AACTGCAGGA CATATTGATC ATGGAAAAAC TTCACTCATT 
AAAGCTTTAA ATGGTTTTGA AGGTGATAGT TTAAAAGAAG AACAAGAAAG ACAAATCACC 
ATTAATTTAA GTTTTTCAAA TCTTAAATTA AAAGATAAAA ACATTTCTTT TATCGATGTT 
CCAGGACATA AAGATTTGGT TAAAACTATG GTAAGTGGAG CTTTTGGCTT TAGTATTTGT 
TTGTTTGTTG TAGATATTAA CGAAGGTTTA AAAGAACAAA GTTTAGAACA TTTAGAAATT 
TTAAAAATTC TTGATATTAA AAATATCATT TTAGTGCTTA GCAAATGCGA TCTTTGTGAA 
AATATAGAGC AAAAAAGTGT AGAAATTTTA GAAGAGTTAA AAAATTTAGA TTATCCCATT 
TTAAAAGTAT TTCACACCAG TATAAAAAAT AATCAAGGCA TAGAAGAATT AAAAAATTAT 
CTTTATACCA TAGAAAACAA AGAAAATGAT GAAGAACTGA TTTTTCATTA TTATATCGAT 
AGAGTTTTTT CTCTAAAAGG CATAGGAACT GTCGTCACAG GCAGCTTGAA TGAAGGAAGT 
ATCACTTTAA ATGAAAAAAT CATCTGTTTA GACACTCAAA AAGAACTCAT TGTTAAAAAT 
ATACAAAATC ACGATACTAA TTTAGAGCAA ATCAAAGCTT GTAACCGTGT GGCTTTGAGT 
TTAAATTGTG ATTATAAAGA GTTAAAAAAA GGTTATTTGC TAAGTAAAAA AGGTTATTTT 
AAAGCCTTTA AAGAATGCGA TGCTTTAGTT AAAGCAAAAA ATTTACAAAA TAACAAAATG 
ATTTTTTGCG TAGGTTCAAG ACAAATAGAA TGCAAAATAA ATATATTAAA AAAACTAGAA 
AATGATGAAT TTTTTGTGCA TTTTAGTTTT GATAAAAATG TATTTTTAAG TTTTGATGAG 
GCTTTTATTT TATTACAAAA CAATCGTGTT ATAGGCGGTG GTAAGGTTTT AAATCCTTTA 
AGCGAACCTT TAAAAAAAGA ACAAAAAAAT AAATTTTTAA TGTTTTTGAA AAATAAAGAT 
TTTAAAGCGG CTTTTTCTTT CTTAAAAGAC GCACACAAAT ACGGCTTTGG CTTGCTTTCA 
AGTTATCAGA GATTTAAACT TTCTCATCAA AAAGCATTGA AATTAGCAAA AGAATTAAAT 
CAAGTATTTG TTGATGAAAA AAATCTTAAT GTATATCATT TACAAAGTCT AGAAGAAATT 
AAAAATTTCA TCAAATTCAT ACTTGAAAAA AATCCTTATG CCATGCTTTC AGCACATTCT 
TTAGCTTTAA GGATTACTTG GGCAAGTGAA AATTTTTGCG AACTCGGGCT TAAAGAGATG 
TCAAATTTAT TGGATTTTCA AAATGGAATT TATTTTAAAA AAGGCATAGA TTTTGAAAAA 
CTTCAAGAAA AAAATAATAA TCAATTATAT GAAATTTTAA AAAAACAAGG TATTAAACCC 
GAAGCTCCTT ATAATCTTTA TGATTTTTTA GAACTTGATA GAAAAAGCGG AGATAATATA 
CTCAAAAAAC TTACCCAAAA AGGCTTGGTT GTAAGACTTT CACACAATCT TTTTATAGAA 
AAACAAGCTC TTGAAAAACT TATGCAAGAA TGTTTAAATT TATTAAAAAA TCAAAGTCTT 
GATGTGCAAA GTATGAAAGA ATATTTCAAT CTTTCAAGAA AATATGCTAT TGCTTATTTA 
GAATACTTAG ACAAATTTCC TCAAGTAAGC AAAGAAGCTG AAAAAAGATT TTTAACAAAC 
ATTTAG 

 

Protein sequence

MKSVIIGTAG HIDHGKTSLI KALNGFEGDS LKEEQERQIT INLSFSNLKL KDKNISFIDV 
PGHKDLVKTM VSGAFGFSIC LFVVDINEGL KEQSLEHLEI LKILDIKNII LVLSKCDLCE 
NIEQKSVEIL EELKNLDYPI LKVFHTSIKN NQGIEELKNY LYTIENKEND EELIFHYYID 
RVFSLKGIGT VVTGSLNEGS ITLNEKIICL DTQKELIVKN IQNHDTNLEQ IKACNRVALS 
LNCDYKELKK GYLLSKKGYF KAFKECDALV KAKNLQNNKM IFCVGSRQIE CKINILKKLE 
NDEFFVHFSF DKNVFLSFDE AFILLQNNRV IGGGKVLNPL SEPLKKEQKN KFLMFLKNKD 
FKAAFSFLKD AHKYGFGLLS SYQRFKLSHQ KALKLAKELN QVFVDEKNLN VYHLQSLEEI 
KNFIKFILEK NPYAMLSAHS LALRITWASE NFCELGLKEM SNLLDFQNGI YFKKGIDFEK 
LQEKNNNQLY EILKKQGIKP EAPYNLYDFL ELDRKSGDNI LKKLTQKGLV VRLSHNLFIE 
KQALEKLMQE CLNLLKNQSL DVQSMKEYFN LSRKYAIAYL EYLDKFPQVS KEAEKRFLTN 
I