| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5688 |
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| Symbol | |
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| ID | 8337049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6562939 |
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| End bp | 6564729 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644958792 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_003116387 |
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| Protein GI | 256394823 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00475] selenocysteine-specific elongation factor SelB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCGA CCGCCGGCCA TGTCGACCAC GGGAAGTCCC TGCTGGTCCG GGCTCTGACG
GGGATGGAGC CGGATCGGTG GGCGGAAGAA CGCCGCCGTG GGATGACCAT CGATCTGGGC
TTCGCCTGGA CTGCCTTGTC CGACGATCGC ACGGTGGCGT TCGTGGACGT GCCCGGCCAT
CAGCGGTTCG TGTCGAACAT GCTGGCCGGC GTCGGTCCGG TGCCGGCGGT GATGCTGGTG
GTGGCCGCCG ACGAGGGCTG GCGGCGGCAG ACAGGGGAAC ATCTGGCCGC GCTCCATGCC
CTGGACGTCC GGCACGGCGT TCTGGTGATC ACCCGTACTG ATCTGGCGGA TCCAGAGCCG
GCCATCCGGC AGGCGCACGA ACAATTGGTC TCCACGTCGC TGGCCGGAAT GGAGACGGTC
GCGGTCAGCG CGGCCACCGG AGCGGGGATC AAGCAGCTGC GGGAGGCATT GGGACGGCTG
GTGGCGGCGT TGCCCGAGCC GGCGGCGAAC GCCCCGACGC GGCTGTGGGT CGATCGGGTC
TTCACCGTCC GCGGCACCGG GACGGTCGTC ACCGGCACGC TGGGCTCGGG GCGGATCGCC
AGAGGCGACG AGCTGGTGCT GATGCCTGCC GGTACCCCAG TGCAGGTCAG AGGGCTGCAG
AGCCTGAAGG CGGAGGTGGC GGCGGCGACA GCGACGGCCA GAGTGGCTCT CAGCCTGCGC
GGGGTGGCCG TCGAGGAGAT CCGGCGCGGC GAGGCGTTGA CCGGACCGGG GCAGTGGACA
GCCGTCTCCA CCGTCGACGT CCGGCTGGTC CGGCCGGCCG ATCGCCTGGC TGCGCGCCAG
GTCATGCACC TCGGATCGGC GAACGTGCCG TGCCAGGTGC GCAGGCTCGG CGCCGACACC
GCGCGGATCA CGTTGGCCAC ACCACTGCCG ATCCATATCG GTGAGCACGC GTTGCTCCGG
GATCCGGGTC TGCAACGCAT CGTCTCCGGA GTCGTGATCC TCGACCCCGA TCCGCCGGCG
CTCAACCGCC GTGGCTCCTC AGTTGCTCGG GCGCAGCAGT TGGCGGAGCT CAGCGGGGAC
GCCGACCCCG CGGCCGAGAT CCGCCGGCGA GGCAGTGCTC GCCGTAGCCG GCTCGTCGCA
CTCGGAATCC TCGCCGCGGA CGGGGACCCC CCGGCGTCGG CGGTTGTGTC AGGAGACTGG
CTCGTCGATG CGGCGGAGTG GCGCGCCTGG GCCGACGGCC TGGCCGTCGC GGTGGACTCC
TGGGCCGCGA ACCATCCGGC GGACCAGGGG CTGCCCCGGG AAGCCGCGAT GCGTCAGACA
GGAGTTCCCG ACGCCGCCTT GGTGACGGAA CTGGTCCGCG CCGACCCGAC ACTGATCCTG
GACGGTCGGG GAATCCACCG CCGAGGCCGG TCGCTGCTGA ACGGCGCGGT CGAGCAGGCG
GTGCGGGTAC TGGAGCGGCG TTTGGCGGAG TCAGAGTTCG CCGCACCGGA GGCCGCCGAA
CTCCTCGAGC TCGGGCTGAC CGACCGCGGG TTGGCACTGG CGGTGGGAGA GGGCCGGCTG
ATCCGTGTCA CCGACGGAAT CTTCTTGCGC CCCGGCGCAG TCGAGGAGGC GCTTCGGCGG
GTACGTCTGC TTGCGCAGCC GTTCACGCTG AGTGAAGGAC GGATCGCTCT GGGTACGACT
CGGCGTGTCG CGGTCCCGCT GTTCGAGCTG ATGGACGATC GTGGGCTCAC GCGCCGGGCT
GATGACGGCC GACGGGAGAT CTGCCGACCG GTGGAGGGCC CGGGAGGTTG A
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| Protein sequence | MIATAGHVDH GKSLLVRALT GMEPDRWAEE RRRGMTIDLG FAWTALSDDR TVAFVDVPGH
QRFVSNMLAG VGPVPAVMLV VAADEGWRRQ TGEHLAALHA LDVRHGVLVI TRTDLADPEP
AIRQAHEQLV STSLAGMETV AVSAATGAGI KQLREALGRL VAALPEPAAN APTRLWVDRV
FTVRGTGTVV TGTLGSGRIA RGDELVLMPA GTPVQVRGLQ SLKAEVAAAT ATARVALSLR
GVAVEEIRRG EALTGPGQWT AVSTVDVRLV RPADRLAARQ VMHLGSANVP CQVRRLGADT
ARITLATPLP IHIGEHALLR DPGLQRIVSG VVILDPDPPA LNRRGSSVAR AQQLAELSGD
ADPAAEIRRR GSARRSRLVA LGILAADGDP PASAVVSGDW LVDAAEWRAW ADGLAVAVDS
WAANHPADQG LPREAAMRQT GVPDAALVTE LVRADPTLIL DGRGIHRRGR SLLNGAVEQA
VRVLERRLAE SEFAAPEAAE LLELGLTDRG LALAVGEGRL IRVTDGIFLR PGAVEEALRR
VRLLAQPFTL SEGRIALGTT RRVAVPLFEL MDDRGLTRRA DDGRREICRP VEGPGG
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