| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2560 |
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| Symbol | |
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| ID | 4282289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 2918300 |
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| End bp | 2920195 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638139444 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_755218 |
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| Protein GI | 114568064 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.475206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGGC TTATTATTGG AACGGCAGGA CATATAGATC ACGGCAAAAC CACTCTGGTA
AGAGCCTTGA CCGGAGTTAA TACCGACCGT TTGAAGGAAG AAAAGCAGCG GGGTATTTCC
ATTGAATTGG GATTTGCCCC CTTTATGCTG CCTAGTGGCC ATAAGGCGGC CATTGTTGAT
GTGCCGGGAC ACGAGCGCTT TATCCGGCAT ATGCTGGCTG GGGCTTTCGG GATTGATATG
GTGGTCTTTG TTATCGCTGC CGATGAAGGA ATCATGCCCC AGACCCGGGA ACATTTAGAT
ATAATTGAAT TGCTGGGGGT TAAGCAGGGG GTAGTAGCTA TTACTAAAAA AGACCTGGTT
GACGAAGAAT GGCTGATGCT GATGGAAGAG GAAATAAAGG AATACCTGGC CGGGACTGCC
TTGAAAAACA GTCCCATGAT AGCAGTATCA GCCGTCAGCG GAGAAGGGAT AAAGCAATTG
CTGGAGGAAA TCGAAAAGAT TGCGGCCCAG GTTGAAGAGA AACCGGTGTT GGGGCAGGCC
CGTTTGCCCA TAGACCGGGT TTTTACTATA GCTGGTTTTG GCACGGTGGT GACCGGTACC
CTGTGGTCGG GGCAAATAAA GACCGGTGAA AGCCTGGAAC TTATGCCGGT GCAGCGACCG
GTCAAAATCA GAAGTCTGCA GGTACACGGA GCCAGGGTTA CGGAAGCCCT GGCGGGACAG
AGGGTAGCGG TCAACCTGCA GGGTATTGAA GTAGCGGAGA TAAAAAGGGG TTACCTCTTG
TCCACCCCGG ATTATCTCCA TCCCAGTTAC CGGGTTGATA CCAGGTTAAG GCTCTTGTCT
TCCAGCAAAA GAACCCTGAA AAACTGGAAC CGGATAAGAT TCCACCTGGG GACTGAGGAG
GCTCTAGGGC GGGTGGTTTT GCTGGATCGG GACGAACTGC AGCCGGGACA AGAAAGCTAT
GCGCAAATTG TCATGGAAAA ACCGGTGGTT TGCCAGAAAG GAGACCCTTT TGTAATCAGG
TATTATTCAC CGGTGACTAC CATTGGCGGC GGAAACATAA TTGACCCAAA TGCCCCCAAA
CAGAAACGCT TCCGGGAAGA GGTTCTGGAG CAACTGGTAA TGAAAGAAGA AGGCAGCCTC
TATGACCTGA TTCTACAGGA GATGGAAGCG GCTGAGGCCA CATTTACCAG CTCTGATTTG
GCACGGAAAA CCGGCCATGA AGAAGAGCAT ATTAAAGAAG AGCTGGAACA ATTGCTCCTG
GACGAAAAAG TAGGGGATTT AAAAAATGGG GAATACATGA GCACCCGGAG CTTAGAAAAG
ATAAACGATG AGATAGGGAA CCGCTTGCAG GAATACCACC GGCAATATCC TCTGCGGGGG
GGTTATCCCC GGGAAGAGAT GAGAAGCCGG TTTTTCAAAA GCATTAATAC CCGAAGCTTT
AATGCCATAA TAAAATACCT GGAGGATAGG GGAAGCATAA ACAGCCGGAA CAACCAGCTT
CGGCTGGCGG GCTACAGCCC TGAGCCGGGA GTGAAAGAAA AGCGGGCCAT TGAAAAAATT
CAGGAAATGA TGGATAAAGA GTTATTTACC CCTCCTTCTC TGGAGGAATT AGAGCAGCAG
CTAGAGCTTA ATGGAGAGGA TTTTATCGAA ATCATTTCCT ACCTGCTCAA CCAGGGATTA
TTGATTAAGC TCTCCGGGGA TATATATTTT TCTACCCAGG CCCTGGAAGA AGGAAAGAAG
ATCCTGGAGG AACATTTTGG CCGGGAAAAG GAGCTCAGCC TGGCCACCGC CCGCGACCTG
TTTAACACCT CGCGCAGGTA TACCTTGCCA TTGTTGGAGC ATTACGACAA GACCCGTTTC
ACCCGCCGGA TAGGGGATAT ACGGGTTAAA GCTTAG
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| Protein sequence | MKRLIIGTAG HIDHGKTTLV RALTGVNTDR LKEEKQRGIS IELGFAPFML PSGHKAAIVD
VPGHERFIRH MLAGAFGIDM VVFVIAADEG IMPQTREHLD IIELLGVKQG VVAITKKDLV
DEEWLMLMEE EIKEYLAGTA LKNSPMIAVS AVSGEGIKQL LEEIEKIAAQ VEEKPVLGQA
RLPIDRVFTI AGFGTVVTGT LWSGQIKTGE SLELMPVQRP VKIRSLQVHG ARVTEALAGQ
RVAVNLQGIE VAEIKRGYLL STPDYLHPSY RVDTRLRLLS SSKRTLKNWN RIRFHLGTEE
ALGRVVLLDR DELQPGQESY AQIVMEKPVV CQKGDPFVIR YYSPVTTIGG GNIIDPNAPK
QKRFREEVLE QLVMKEEGSL YDLILQEMEA AEATFTSSDL ARKTGHEEEH IKEELEQLLL
DEKVGDLKNG EYMSTRSLEK INDEIGNRLQ EYHRQYPLRG GYPREEMRSR FFKSINTRSF
NAIIKYLEDR GSINSRNNQL RLAGYSPEPG VKEKRAIEKI QEMMDKELFT PPSLEELEQQ
LELNGEDFIE IISYLLNQGL LIKLSGDIYF STQALEEGKK ILEEHFGREK ELSLATARDL
FNTSRRYTLP LLEHYDKTRF TRRIGDIRVK A
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