Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2707 |
Symbol | |
ID | 3714402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3117177 |
End bp | 3119087 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | selenocysteine-specific translation elongation factor SelB |
Protein accession | YP_348438 |
Protein GI | 77458932 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.285696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGTCG GCACGGCAGG GCACATCGAC CACGGCAAGA CGTCACTGCT GCAAGCGCTG ACCGGGCAAA CCGGCGACCG CCGCCCGCAG GAACGTGAGC GCGGGATGAC CATCGACCTC GGTTATCTGT ACGCAGAACT GGCGCCCGAC GCGGGGCTGA CCGGTTTCAT CGACGTACCG GGGCACGAGA AATTCACCCA CAACATGCTC GCCGGCGCGC AGGGCATCGA TCTGGTGTTG CTGGTGGTGG CGGCGGATGA CGGCGTGATG CCGCAGACCC GCGAGCATCT GGCGATCGTC GAACTGCTGG GCATTCCACG GGCGCTGGTG GCGATCACCA AGTGCGACCG GGTCGAGGCG GGCAGAGTGG AGGAAGTTCG CCGACAGGTT GAAAGCCTGC TAGCAACCGG GCCCTATGCC GAAGCGCCAC TGCTGACGGT TTCCAGCGTG ACAGGTGAGG GCGTCGATGC GCTGCGCGAA GCGTTGCGGC AGATAGAAGG CGAGGAGCGC AGTCGCGAAG GCGGTTTTCG CCTGGCCATC GACCGGGCGT TCAGTGTCGC CGGCGCCGGG ATCGTGGTGA CGGGGACGGC GCTTTCGGGC TCGGTCGCCG TGGGTGACAA GCTGAGTCTC GGGCCGGCGT GCAAAACCGT GCGGGTCAGG GGCCTGCACG CGCAGAATCA AGCCGCCGAA CAAGCCTTCG CCGGCCAGCG CGTGGCCCTG AACATCAGCG CGGATCGTCT GGAACTCGGG CAGATCCATC GCGGCCAATG GTTGCTCGCC GAATGGCTGC ACGCACCGAC CCAGCGGCTG GATATCGAAT TCCGGTTGTT GCCGGGCGAG CGGGTTTTCG AGCATTTCCA GCCGGTGCAT CTGCATCTCG GCACTCAGGA CGTGATCGCC CGAGTCGCCT TGCTGGAGGG TTCAAGCCTG TCGCCTGGCG AGCGCATGTT TGCACAACTG CTGACGAACG TCCCGGTGCA CGGCGTCCAC GGTGATCCGC TGATCCTGCG TGACGCCAGC GCCCAGCGCA CGCTCGGTGG CGGGCGCGTC CTTGATCCCT TCGCCCCGGC CCGCCAGCGG CGCAGCCCGG AACGGCTGGC GCAACTGCGT GTGCTGGCGA TCAGCTGCGA GCTGGAACAG GCCTTGCCGA CGTTGCTGGA ATACAGCGCA AGCGGCCTCG ACCCGCAACG CCTGGAACGT CAGTTCAATC GTCCGCGTGA CGGCTGGACG CTGCCGGACA ACGTCCGCCT GATCGAAACC CGTCAGGGGC CGGTGCTGTT CAATGCGCAG CGCTGGGGGA TGCTCAAGTT CAACTTGCTG GAACAACTGG CGCGCTTTCA TGAACTGGAA CCCGATCAGA TGGGCCCGGA TCGTGACCGT CTGCGGCGTT TCAGCGGTTT GAGCCTCGAA CGCGCAACGT TTATCAGCCT GCTGGAAGAA CTGCTCGGCG CCGGTTCACT GGTCGCCAGT GGCCCGTGGC TGCATTTGCC CGACCATCAA GTGCGCCTGA GTGCCGACGA CGAAACCCTG TGGCAGGCGC TGCAGCCATT GTTCGAGCAG GCCGGTTTCG ATCCTCCGTG GGTTCGTGAC GTGGCGAAAG TCGTCGGTCA GGAAGACGCG ACCGTGCGTT TGCTGCTGCG CAAACTGGCG CGCCTCGGCG TGATGCATCA AGTGGTGCGC GACCTGTTTG TCAGCGACAT CACGCTGCGG CAAATGGTGG CGGTGCTGCT GCGTCTGGCC GAAGAAAATC CGCAGATCGA AGTCACGGCC TTCCGCGATG CGCTAGGCTT GGGACGCAAG CGCAGTATTC AGATCCTCGA ATACTTCGAC CGGCTGGGCC TGACCCGGCG CGTCGGCGAA GGCCGGCAAA TCCGCACCGA CAGTGCGCTG GCCAACCCCG GCGCGGACTG A
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Protein sequence | MIVGTAGHID HGKTSLLQAL TGQTGDRRPQ ERERGMTIDL GYLYAELAPD AGLTGFIDVP GHEKFTHNML AGAQGIDLVL LVVAADDGVM PQTREHLAIV ELLGIPRALV AITKCDRVEA GRVEEVRRQV ESLLATGPYA EAPLLTVSSV TGEGVDALRE ALRQIEGEER SREGGFRLAI DRAFSVAGAG IVVTGTALSG SVAVGDKLSL GPACKTVRVR GLHAQNQAAE QAFAGQRVAL NISADRLELG QIHRGQWLLA EWLHAPTQRL DIEFRLLPGE RVFEHFQPVH LHLGTQDVIA RVALLEGSSL SPGERMFAQL LTNVPVHGVH GDPLILRDAS AQRTLGGGRV LDPFAPARQR RSPERLAQLR VLAISCELEQ ALPTLLEYSA SGLDPQRLER QFNRPRDGWT LPDNVRLIET RQGPVLFNAQ RWGMLKFNLL EQLARFHELE PDQMGPDRDR LRRFSGLSLE RATFISLLEE LLGAGSLVAS GPWLHLPDHQ VRLSADDETL WQALQPLFEQ AGFDPPWVRD VAKVVGQEDA TVRLLLRKLA RLGVMHQVVR DLFVSDITLR QMVAVLLRLA EENPQIEVTA FRDALGLGRK RSIQILEYFD RLGLTRRVGE GRQIRTDSAL ANPGAD
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