Gene Pfl01_2707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2707 
Symbol 
ID3714402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3117177 
End bp3119087 
Gene Length1911 bp 
Protein Length636 aa 
Translation table11 
GC content65% 
IMG OID 
Productselenocysteine-specific translation elongation factor SelB 
Protein accessionYP_348438 
Protein GI77458932 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.285696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTCG GCACGGCAGG GCACATCGAC CACGGCAAGA CGTCACTGCT GCAAGCGCTG 
ACCGGGCAAA CCGGCGACCG CCGCCCGCAG GAACGTGAGC GCGGGATGAC CATCGACCTC
GGTTATCTGT ACGCAGAACT GGCGCCCGAC GCGGGGCTGA CCGGTTTCAT CGACGTACCG
GGGCACGAGA AATTCACCCA CAACATGCTC GCCGGCGCGC AGGGCATCGA TCTGGTGTTG
CTGGTGGTGG CGGCGGATGA CGGCGTGATG CCGCAGACCC GCGAGCATCT GGCGATCGTC
GAACTGCTGG GCATTCCACG GGCGCTGGTG GCGATCACCA AGTGCGACCG GGTCGAGGCG
GGCAGAGTGG AGGAAGTTCG CCGACAGGTT GAAAGCCTGC TAGCAACCGG GCCCTATGCC
GAAGCGCCAC TGCTGACGGT TTCCAGCGTG ACAGGTGAGG GCGTCGATGC GCTGCGCGAA
GCGTTGCGGC AGATAGAAGG CGAGGAGCGC AGTCGCGAAG GCGGTTTTCG CCTGGCCATC
GACCGGGCGT TCAGTGTCGC CGGCGCCGGG ATCGTGGTGA CGGGGACGGC GCTTTCGGGC
TCGGTCGCCG TGGGTGACAA GCTGAGTCTC GGGCCGGCGT GCAAAACCGT GCGGGTCAGG
GGCCTGCACG CGCAGAATCA AGCCGCCGAA CAAGCCTTCG CCGGCCAGCG CGTGGCCCTG
AACATCAGCG CGGATCGTCT GGAACTCGGG CAGATCCATC GCGGCCAATG GTTGCTCGCC
GAATGGCTGC ACGCACCGAC CCAGCGGCTG GATATCGAAT TCCGGTTGTT GCCGGGCGAG
CGGGTTTTCG AGCATTTCCA GCCGGTGCAT CTGCATCTCG GCACTCAGGA CGTGATCGCC
CGAGTCGCCT TGCTGGAGGG TTCAAGCCTG TCGCCTGGCG AGCGCATGTT TGCACAACTG
CTGACGAACG TCCCGGTGCA CGGCGTCCAC GGTGATCCGC TGATCCTGCG TGACGCCAGC
GCCCAGCGCA CGCTCGGTGG CGGGCGCGTC CTTGATCCCT TCGCCCCGGC CCGCCAGCGG
CGCAGCCCGG AACGGCTGGC GCAACTGCGT GTGCTGGCGA TCAGCTGCGA GCTGGAACAG
GCCTTGCCGA CGTTGCTGGA ATACAGCGCA AGCGGCCTCG ACCCGCAACG CCTGGAACGT
CAGTTCAATC GTCCGCGTGA CGGCTGGACG CTGCCGGACA ACGTCCGCCT GATCGAAACC
CGTCAGGGGC CGGTGCTGTT CAATGCGCAG CGCTGGGGGA TGCTCAAGTT CAACTTGCTG
GAACAACTGG CGCGCTTTCA TGAACTGGAA CCCGATCAGA TGGGCCCGGA TCGTGACCGT
CTGCGGCGTT TCAGCGGTTT GAGCCTCGAA CGCGCAACGT TTATCAGCCT GCTGGAAGAA
CTGCTCGGCG CCGGTTCACT GGTCGCCAGT GGCCCGTGGC TGCATTTGCC CGACCATCAA
GTGCGCCTGA GTGCCGACGA CGAAACCCTG TGGCAGGCGC TGCAGCCATT GTTCGAGCAG
GCCGGTTTCG ATCCTCCGTG GGTTCGTGAC GTGGCGAAAG TCGTCGGTCA GGAAGACGCG
ACCGTGCGTT TGCTGCTGCG CAAACTGGCG CGCCTCGGCG TGATGCATCA AGTGGTGCGC
GACCTGTTTG TCAGCGACAT CACGCTGCGG CAAATGGTGG CGGTGCTGCT GCGTCTGGCC
GAAGAAAATC CGCAGATCGA AGTCACGGCC TTCCGCGATG CGCTAGGCTT GGGACGCAAG
CGCAGTATTC AGATCCTCGA ATACTTCGAC CGGCTGGGCC TGACCCGGCG CGTCGGCGAA
GGCCGGCAAA TCCGCACCGA CAGTGCGCTG GCCAACCCCG GCGCGGACTG A
 
Protein sequence
MIVGTAGHID HGKTSLLQAL TGQTGDRRPQ ERERGMTIDL GYLYAELAPD AGLTGFIDVP 
GHEKFTHNML AGAQGIDLVL LVVAADDGVM PQTREHLAIV ELLGIPRALV AITKCDRVEA
GRVEEVRRQV ESLLATGPYA EAPLLTVSSV TGEGVDALRE ALRQIEGEER SREGGFRLAI
DRAFSVAGAG IVVTGTALSG SVAVGDKLSL GPACKTVRVR GLHAQNQAAE QAFAGQRVAL
NISADRLELG QIHRGQWLLA EWLHAPTQRL DIEFRLLPGE RVFEHFQPVH LHLGTQDVIA
RVALLEGSSL SPGERMFAQL LTNVPVHGVH GDPLILRDAS AQRTLGGGRV LDPFAPARQR
RSPERLAQLR VLAISCELEQ ALPTLLEYSA SGLDPQRLER QFNRPRDGWT LPDNVRLIET
RQGPVLFNAQ RWGMLKFNLL EQLARFHELE PDQMGPDRDR LRRFSGLSLE RATFISLLEE
LLGAGSLVAS GPWLHLPDHQ VRLSADDETL WQALQPLFEQ AGFDPPWVRD VAKVVGQEDA
TVRLLLRKLA RLGVMHQVVR DLFVSDITLR QMVAVLLRLA EENPQIEVTA FRDALGLGRK
RSIQILEYFD RLGLTRRVGE GRQIRTDSAL ANPGAD