| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_25300 |
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| Symbol | |
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| ID | 8396418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2801562 |
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| End bp | 2803487 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644987275 |
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| Product | selenocysteine-specific elongation factor SelB |
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| Protein accession | YP_003144886 |
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| Protein GI | 257065214 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.291858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGAAT TCGACCAACC GAATCTTGTT CTGGGTACCG CCGGCCACAT CGACCACGGC
AAATCGTCGC TGGTGCGCGC GCTGACCGGT ACCGACCCCG ATCGTTTGGC CGAAGAGAAG
AAGCGCGGCA TCACCATCGA GCTGGGCTTC GCCCGACTCG ACTTGGGCGA CGGCCGCTCC
ATGGGCGTCG TCGACGTGCC TGGCCACGAG AAGTTCGTTC GTCAGATGAT CGCCGGTTCC
ACCGGCATCG ACGTGGCGCT GCTGGTTATC GCTGCCGATG ACGGCGTCAT GCCCCAAACC
CTGGAGCATC TGGCCGTCCT GCAGACGCTG GGCGTTCCCA CCTGCGTCGT GGCGCTCACG
AAGATCGACC TGTGCGACCC CGAATGGGTC GAGCTGGTTA CCGAAGACAT CAACTCGCTC
CTGTCGAACA CGCCGTTCGC CGGAGCCCCC ATCATTCCGT GTTCGAGCCG CACCGGCGAA
GGCGTCGAGG ACGTTCGCGC CGCGCTTGCG AAGGCGAGCA TGAATGCCAC CGCGCTGCAT
CGCAGCTACG GCATGCGTCA GCCGGTCGAC CGCGTGTTCA GCATCCGCGG CGCAGGTACG
GTCATCACCG GCACCCTGTG GAGCGGCACG GTGCGTCCCG GCGACACCGT GGAGATGCTG
CCTCAGGAGC GCCAATGCCG CATCCGCACC GTTCAGATGC ACGACAAGCC CGTTGACGTG
GCCGTTGCCG GCAATCGCGT GGCGTTGAAC CTGGTCGATG TGAAGACCGA CGAGATCCGC
CCCGGTGACT TCCTGGCGAC TCCCGGCCTC ATCGAGCCTA CGATCCGTTT CGACACGCAT
TTCACGTACC TCGACACCGC TAAAAGCGGC AAGCCTCTGG AAAGCGGCGT TCGCATGCAT
GTGTCCCATG GCACCAAGGA GGTGCTGGGC CGCGTGCTGT TTACCGACGG TCGCGTGAAG
CTTTCTCCAG GTGAGAGCTG CTTCGCCCAA ATCCGCCTCG AAGAGCCTTT GCCTGTGTCG
CTGGGCGACC GGTTCATCGT GCGCACGTAT TCGCCGGTGT ATGTGGCCGG CGGCGGACAG
GTTCTGCAGG CGCATCCGCG CAACCGCACC AACCTGCACG AGGAGGTCTC CATTCTCGAG
GCGTTGGCAT CGGGTGACCG CCAAGAAGCC GTTCGCTACG TGCTGGAGCA GAGGACTGCT
CCGCTTACGG CTCATGACCT GGCCCGGCAG TTCGGCATCG ACGAGCCCGC GGCCCTTGAG
CTGCTTCAGG CCGAGGTGGA TGCCCATCGC GGCTGCAAGG TGGGGGAGCT GTGGTTCTCC
ACACCGGCGA CGGTTCGTCG CTCGATTTCC GCCATCGAGA AGGAACTGAC GGTGTTCCAT
GCCGACAACC CTTCCAAGCC GGGCCTGCCC AAGGAAGAGC TGCGCCAGCG GTGCCTGCCC
ACCATGGAGC CGGCCTGCTT CGACGAGATC GTTTCCGAAG CCGTTGCGGC CAAGGCCGCC
GTGGTCGTCG GCGGGCTTGT GGGTCATCCC GCCGCCCAAG GTGCTGCGCA AGAAGCCGAA
AAGGCCGCTG CGGATGCACT TTCGGCAGCC CTCAAGTCCT ACGGCCTGAC GCCGCCTTCC
CTTACGGAAT TGGCCCAGGA AGTGCATGTT GACCTGGCTC TTGCCCGTCG CGCCCTTGCA
CGGCTTCGCG ACGAAGGGGC CGTCTACCGC GTATCCAGCG AGCTGTTCTA CGACGGGGCT
GCGGTCGAAG CATGCAAGAA AGCCATCGCC GAGGTTTTAC GCAACGGCGG CGAAGGGACG
ATCGCCGGCA TGAAGGACGC CATGGGAGGC ATCAGCCGTA AATTCGCGGT GCCGCTGCTT
GAGGCGTTCG ACGAAGAGGG CTTCACCGTG CGCGACGGCG CCGTTCGCAC GCTTCGCAAA
GGCTAA
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| Protein sequence | MGEFDQPNLV LGTAGHIDHG KSSLVRALTG TDPDRLAEEK KRGITIELGF ARLDLGDGRS
MGVVDVPGHE KFVRQMIAGS TGIDVALLVI AADDGVMPQT LEHLAVLQTL GVPTCVVALT
KIDLCDPEWV ELVTEDINSL LSNTPFAGAP IIPCSSRTGE GVEDVRAALA KASMNATALH
RSYGMRQPVD RVFSIRGAGT VITGTLWSGT VRPGDTVEML PQERQCRIRT VQMHDKPVDV
AVAGNRVALN LVDVKTDEIR PGDFLATPGL IEPTIRFDTH FTYLDTAKSG KPLESGVRMH
VSHGTKEVLG RVLFTDGRVK LSPGESCFAQ IRLEEPLPVS LGDRFIVRTY SPVYVAGGGQ
VLQAHPRNRT NLHEEVSILE ALASGDRQEA VRYVLEQRTA PLTAHDLARQ FGIDEPAALE
LLQAEVDAHR GCKVGELWFS TPATVRRSIS AIEKELTVFH ADNPSKPGLP KEELRQRCLP
TMEPACFDEI VSEAVAAKAA VVVGGLVGHP AAQGAAQEAE KAAADALSAA LKSYGLTPPS
LTELAQEVHV DLALARRALA RLRDEGAVYR VSSELFYDGA AVEACKKAIA EVLRNGGEGT
IAGMKDAMGG ISRKFAVPLL EAFDEEGFTV RDGAVRTLRK G
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