| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0035 |
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| Symbol | |
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| ID | 6782853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 43462 |
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| End bp | 45372 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642765997 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_002136862 |
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| Protein GI | 197116435 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATC TTATTCTCGG CACTGCCGGA CACATAGACC ATGGCAAGAC CTCCCTGGTG
AAGGCGCTGA CCGGTGTGGA TACCGACCGG CTCAAGGAGG AAAAGGCCCG CGGCATCACC
ATCGAGCTCG GGTTCGCGCA CCTGGAGCTG CCGGGAGACC TGCGCTTTGG CATCGTCGAC
GTGCCGGGGC ACGAGAGGTT CGTGCGCACC ATGGTCGCCG GCGTGGGGGG GATGGACCTG
GTGCTCCTGG TCATCGCCGC CGACGAGGGG ATCATGCCCC AAACCCGCGA GCACCTCGAG
ATCTGCCAGC TCTTGGGGGT TAAGCGCGGC ATCGTCGTCC TCAGCAAAAA GGACACGGTG
GAGCCGGACT GGCTCGACCT GGTGACCGAG GAAGTGCGCG AGTATCTGGC CGAGAGCTTT
CTGGCGGGCG CGCCCATCGT CGCAGTTTCT TCCCGGACCG GCGATGGCAT CGAGGCGCTG
AAGGCCGAGC TGACCCGGAT GGCGGGAGAG ATCGAGCAGA AGCGGGTCGA TTCCCCCTTT
CGGCTCCCGG TCGACCGCGT CTTCACCGTG ACCGGCTTCG GTACCGTCGT CACCGGGACC
CTTCTCTCCG GCGCGGTATC GGTCGGGGAC GAGGTCGAGA TACTTCCTTC CGGCATCGCC
TGCCGCGTGC GCGGCGTGCA GTCCTTCGGC TCCAAAGTCG AGAAGGGGGG AGCGGGGGAG
AGGCTTGCGG TCAACCTGCA GGGGGTTGAC CACACGGATG TTGAGCGCGG CGATGTCGTC
GTCCCCAAGG GGCTCTACCA GCCGACCAGC GCCGTCGACG TTCGGCTCAA CTACCTTGCC
TCCGCGGGGA AGGAGCTGAA GCACCGCGCC ACCGTCAGGC TCCATTCGGC GACCTACGAG
GTGCCCGCCA AGATCATCCT CTTCGACCGG GGCGCGCTGC AGCCCGGCGA GAGCGCCTAC
GTGCAGTTGC GCCTCTCCAG GCCGGTGCTG TTGCTGCCGG GCGACCCGTT CGTGCTCCGC
ACTTATTCGC CCCAGGCGAC CCTCGGGGGG GGCACGGTGC TCGACCCTGC CCCGCCGAGA
AGGCGCAGGC GCTCCGTCGA GGCGCTGGAA CTCTTGGCTG CGGCGGAATC CGGGGCCGAC
CAGGAGAGGA TTCGCCTCTT GGTGGAGTCG TCGCTTCTCT CAGGGATTTC GGTGCAGGAG
ATGGTGAACC GCTCCGGCAT GTCCGCAAAG CGGATCGAGG CCGCCTTGGC GCCCCTTCTC
TCCAGCGGCG CGGCGATTCA GGTGGTGAAG GAGCCTCGCA TCTTCCTGGG CAAGGACGCT
TTCGCCCAAT TGAAGCAGAA GCTGTCCGGC GAACTGCACG ACTACCTGGA AGAGAACCCG
ATGCAAGAGG GGATTGGGAA GGAAGAGCTC AAATCCCGGA TACCGAAGCG GAGCGACCCA
CGTTTCTTCG GCCCGCTTTT GGCCAGCATG GAGAAGGACG GACAGGCCCT TTCCGACCGC
GATCTGGTCA AGCTCCCCGG GCGCAAGGCA GGCGTGACCC AGGACCAGGC GAGCGTCCAG
GCGGCGCTGG AGGAGGCGCT GAAAAAGGGA TGGTGCGAGC CTCCCACCCT GAAGGAGCTC
TGCGACATGC TGGGCTGCAG CGAGAAGCAG GTGTTAGATC ATGCGAACCT GCTCACCCGC
GAAGGGAGGG TGGCGAAGAT CAAGGGGGAC ATCTTCTATG CCCCAGGGGC CGTGGCCGAG
TTGCGCGAGA AGCTCGTGGC GCGGTTGAAG GAAAAAGGCG AGATCACTCC CCCGGAATTC
CGCGAGGTCA CGGGCCTCAG CCGTAAGTTC ATGATTCCGC TTCTGGAATA CTTCGACAGC
GAGAAGCTCA CCATCAGGAT GGGGGATAAG AGGATATTGC GGAAGGGATG A
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| Protein sequence | MKHLILGTAG HIDHGKTSLV KALTGVDTDR LKEEKARGIT IELGFAHLEL PGDLRFGIVD
VPGHERFVRT MVAGVGGMDL VLLVIAADEG IMPQTREHLE ICQLLGVKRG IVVLSKKDTV
EPDWLDLVTE EVREYLAESF LAGAPIVAVS SRTGDGIEAL KAELTRMAGE IEQKRVDSPF
RLPVDRVFTV TGFGTVVTGT LLSGAVSVGD EVEILPSGIA CRVRGVQSFG SKVEKGGAGE
RLAVNLQGVD HTDVERGDVV VPKGLYQPTS AVDVRLNYLA SAGKELKHRA TVRLHSATYE
VPAKIILFDR GALQPGESAY VQLRLSRPVL LLPGDPFVLR TYSPQATLGG GTVLDPAPPR
RRRRSVEALE LLAAAESGAD QERIRLLVES SLLSGISVQE MVNRSGMSAK RIEAALAPLL
SSGAAIQVVK EPRIFLGKDA FAQLKQKLSG ELHDYLEENP MQEGIGKEEL KSRIPKRSDP
RFFGPLLASM EKDGQALSDR DLVKLPGRKA GVTQDQASVQ AALEEALKKG WCEPPTLKEL
CDMLGCSEKQ VLDHANLLTR EGRVAKIKGD IFYAPGAVAE LREKLVARLK EKGEITPPEF
REVTGLSRKF MIPLLEYFDS EKLTIRMGDK RILRKG
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