Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_0585 |
Symbol | |
ID | 5057026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 658125 |
End bp | 659939 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640472855 |
Product | selenocysteine-specific translation elongation factor |
Protein accession | YP_001157443 |
Protein GI | 145593146 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
TIGRFAM ID | [TIGR00475] selenocysteine-specific elongation factor SelB |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGTGA TCGCCACAGC CGGTCACGTC GACCACGGAA AGTCGACGCT GGTGCGGGCA CTGACCGGCA TGGAACCCGA CCGCTGGGCC GAGGAACGCC GCCGCGGCAT GACCATCGAC CTCGGGTTCG CCTGGACCAC CCTCGACAAC GAACACATGA CCGCGTTCGT CGACGTGCCC GGCCACCAGC GCTTCGTGTC GAACATGCTG GCCGGCGTCG GGCCGGTCAC CGCCGTCCTG TTCGTCGTCG CCGCCGACGA GGGCTGGCGA CGGCAGTCGG CGGAGCATCT GGCGGCGCTG CAGGCCCTTG ACGTGCGCCA CGGCGTCCTC GCGGTCACCC GCTGCGACCT CGCCGACCCT GGCCCAGCCA TCGAGCAGGC ACACGAACGG CTACGCGACA CCGGTCTGGC CGGAATGCCC GCGGTCGCAG TATCCGCGGC CTCCGGCCAC GGCCTCGCCG CTCTGCGCAC CGCGTTGCGC GAACTCACGC GGGCGCTTCC GGCGCCACGG ACGGGTCCAG CGAGACTGTG GGTCGATCGA TCCTTCACCG TACGGGGAAG CGGCACCGTG GTCACCGGAA CACTCGGGTC CGGCACCATG GCGGTTGGCG ACGAACTCGT ACTCGAACCC GCAGGTCGAC CCGTACGGAT CCGCGGCCTG CAAAGTCTCA AGACCAAGGT CGAGCGAGCC AAGGCGGTGT CCCGGCTAGC GGTCAACCTA CGCGGCCTCG GCGCCAACGA GGTCCGACGC GGGTACGCGC TGGTCCAGCC GGGCGCCTTC ACGAGGGTCA CCACCATGGA CGTACGGCTG ATAAGGCAAG CCGACAGGTT ACCTACCCAC CTCGTCCTGC ATATCGGATC GGCGGCGGTG CCCGTACGCC TGAGAAAACT CGGACCACAC GCCGCCCGCC TCGCCCTGAC CACCGCGCTA CCGCTACACG TGGGCGAGCG AGGCCTGCTG CGCGACCCAG GCGCCCAGCA CATCGTCGCC GGCATCGTCG TTCTCGACAC CATGCCCCCG CAACTCCACG CCCGAGGCGA CGCCAGACGC CGGGCCACAC AACTGACGGG CATGAGCGAT CGGCCCGACG CGGTTGCTGA CATCGCCCGT CGAGGGGCTG TCAGGCGCGA AGCGCTCGTC ACCGCAGGAG TTCTAGCCTA CGAAACCGAG GTGCCGGCAG ACGTCGTCGC CGTAGGCGAG TGGCTGGTCG CCCCAACCCT CTGGAAGACC TGGGTGTCCG CGTTGAGCGC AGCTGTCGAC GAGTGGGCGG CGGCGAACCC GCTCTCACCC GGCCTTGCGC CGGAGGCGGC TGCCGGGCGG GCCGGCATCC CCGACCTCCG GCTGATCGGA GCGCTGATGG CCGACGCGGG GCTCGTGCTC GGCAGCGGCG CCATGCGCCG CAAGGATGCC AAGATCCGGT TCCCCGAACC AGTGCGCCGC GCACTCGACG AGATTCGCGC ACGACTGCGT GAAGACCCGT TCGCCGCCCC CAGCGCCGAG GAACTCGCAC GACACCGGTT GTCCCGGCAG CACCTGGCCG CCGCGGTCAA CGCGGGTCTG CTGTGCCGTA TCGCACCCGA TGTATACCTG CTACCCGACG CGCCGACCGA GGCGGCGCGC CGACTCGCGG GCATCGATCA GCCATTCACT GTCAGCCAGG CCCGCATCGC ATGGGGCACC AGCCGCCGCG TCGCGGTACC GCTTCTCGAG TACCTCGACA ATCAGGGCGC CACCCGACGC ACGGGCAACA CACATCGGTT GTTGACTTTC CGTACTGTAG CTGGGCCTTC CCTCCCTGAG CCTCAATACC ACTGA
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Protein sequence | MFVIATAGHV DHGKSTLVRA LTGMEPDRWA EERRRGMTID LGFAWTTLDN EHMTAFVDVP GHQRFVSNML AGVGPVTAVL FVVAADEGWR RQSAEHLAAL QALDVRHGVL AVTRCDLADP GPAIEQAHER LRDTGLAGMP AVAVSAASGH GLAALRTALR ELTRALPAPR TGPARLWVDR SFTVRGSGTV VTGTLGSGTM AVGDELVLEP AGRPVRIRGL QSLKTKVERA KAVSRLAVNL RGLGANEVRR GYALVQPGAF TRVTTMDVRL IRQADRLPTH LVLHIGSAAV PVRLRKLGPH AARLALTTAL PLHVGERGLL RDPGAQHIVA GIVVLDTMPP QLHARGDARR RATQLTGMSD RPDAVADIAR RGAVRREALV TAGVLAYETE VPADVVAVGE WLVAPTLWKT WVSALSAAVD EWAAANPLSP GLAPEAAAGR AGIPDLRLIG ALMADAGLVL GSGAMRRKDA KIRFPEPVRR ALDEIRARLR EDPFAAPSAE ELARHRLSRQ HLAAAVNAGL LCRIAPDVYL LPDAPTEAAR RLAGIDQPFT VSQARIAWGT SRRVAVPLLE YLDNQGATRR TGNTHRLLTF RTVAGPSLPE PQYH
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