| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_1114 |
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| Symbol | |
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| ID | 6315332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 1180650 |
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| End bp | 1182551 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642643486 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_001917285 |
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| Protein GI | 188585740 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.366063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATCATG TGATAGGTAC AGCAGGCCAT GTGGATCATG GAAAAACTAA GTTGATAGAG
GCGTTAACGG GAGAAGATAC CGACCGCCTA CAAGAGGAAA AGGATCGAGG GATTTCCGTA
GACTTAGGAT TTGCTCCATT TAAGCTTCCT AGTGGTAGCA TAGCTGGGGT GGTTGATGTT
CCCGGACATG AAAAATTCAT TCATAATATG CTTGCTGGAA TTGCAGGAAT AGATTTGGTT
ATTTTAGTAA TTGACGTGAA TGAGGGAATC ATGCCTCAGA CTAAAGAACA TATTGCAATT
ATGGAGTTAC TGGAAATTAA ATCTGGTATA ATTGTTCTCA CTAAAGTAGA TCAGGCAGAA
GAGGAATGGA TTGAACTTAT GCAGGAAGAA GTCAGAGAAA GCTTATCCCA AACATTTCTA
AAAGATGCCC CTCTTATAAA GACCTCTGTG GTTTCAGGAA AAGGAGTTTC AGAGTTAAAA
GAATTAATTG ACGATAAATT GCAGCAAGTC CCTCCTAAGG ATGAAGGTGG GCCTGTTCGC
ATGCCTATTG ACAGGGCATT TAAGATATCT GGGTTTGGAA CTGTAGTAAC AGGCACTCTG
TTTTCAGGAA CCATAGATAA AGGTGATGAA CTTGAGATAG TTCCTAGTGA GACTAAAACA
CGAGCAAGGC AGATTCAAGT CCATGGGAAA CAAGTCGATA AAGGACGGGC AGGACAGAGA
TTAGCCATTA ACATTCCCAA TGTTTCGGCG GAGAATTTGG AAAGGGGCTA TGTATTATCG
GAACCAAGTT ATTTTAAGGA AGTGTCAAAA TGTGATGTCA GAGTGAATAT GCTACAAGAT
ATAGATTGGG AACTTAAAAA TGGTTCACCT GTACATCTTC ATGTAGGAGC GGGAGAGACC
GTGGCCAGAA TATACTTTTA TGGGCAGAAA AAATTACAAC CGGGGGAGAG TTCATTAGCA
CAATTGAGAT TGGAAAAGCC CCTTGCTATA TTTAGAAAAG ATAGATTTAT TATTAGATCA
TACTCTCCTG TTACCACTAT CGGTGGCGGA TTAGTTTTAG AGCATGATGC TAACAAAAAA
CCTTTAAGTT CACAAAAAGT TATTGATCAC TTACTAGCTC TGGAGAAAGG TGATCCTAGT
GAATTAGTTA ATCAAGTTGT CAAAACTAAA AAAATTGTTT CTTTGGATAA AATCGCTAAA
GAAACAGGTG TTTTAGGTGA AGATCTTAAT TCTATTGTTA AAGGACTATC TGAAGGTCAA
AAATTGGTTA CTTTAGGGGA CTACGTGATT GATTTCGAGA AAATCCAGTA TTTAACTCAG
CAGATAATTG AATCCCTCAA TGAATTCCAA AAAAATTATC CCTTACGTCC TGGGAAGCCA
AAAGCAGAGA TTATAAGCTT CCTGGTCAAA TCTGGTATGG ATGAGAAAGC ATCCATGATT
TTATTAGAAC AGCTCCAAAA AGACAGTAAG ATAAAGGTGG AAAATGATCA TATTAGCTTA
CCAGATTTCA AACCTGAACC AACTAATGAA CAAAAACAGT TACTGAAAGA AATTGAAGAT
AAATATGCAA ACCAAGGTTT TCGTCCTCCA GCTTTAGAAG ATATCTCTAA TGATTTGAAA
ATATCTAAGG ATATGACAAG AGAATTGTTT GAATACCTGG TAATGGTGGG GACAATGATA
AAAATTACCG ATAATTATTA TATGCTAGCT CAAGATGTAG ACAAAGCCAA ACAGCTGCTG
AAAGATCATT TTTCTGATCA AGATACACTG TCCATTGGAG AATGGAGAGA TATATTGGAT
ACTACTCGAA AGTACGCCTT ACCTTTACTG GAATATTTTG ACAGAATAAA ACTAACTAGA
CGTCAGGAAG ATGTTAGAGT CTATCTGGGA AACAACGAGT AA
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| Protein sequence | MHHVIGTAGH VDHGKTKLIE ALTGEDTDRL QEEKDRGISV DLGFAPFKLP SGSIAGVVDV
PGHEKFIHNM LAGIAGIDLV ILVIDVNEGI MPQTKEHIAI MELLEIKSGI IVLTKVDQAE
EEWIELMQEE VRESLSQTFL KDAPLIKTSV VSGKGVSELK ELIDDKLQQV PPKDEGGPVR
MPIDRAFKIS GFGTVVTGTL FSGTIDKGDE LEIVPSETKT RARQIQVHGK QVDKGRAGQR
LAINIPNVSA ENLERGYVLS EPSYFKEVSK CDVRVNMLQD IDWELKNGSP VHLHVGAGET
VARIYFYGQK KLQPGESSLA QLRLEKPLAI FRKDRFIIRS YSPVTTIGGG LVLEHDANKK
PLSSQKVIDH LLALEKGDPS ELVNQVVKTK KIVSLDKIAK ETGVLGEDLN SIVKGLSEGQ
KLVTLGDYVI DFEKIQYLTQ QIIESLNEFQ KNYPLRPGKP KAEIISFLVK SGMDEKASMI
LLEQLQKDSK IKVENDHISL PDFKPEPTNE QKQLLKEIED KYANQGFRPP ALEDISNDLK
ISKDMTRELF EYLVMVGTMI KITDNYYMLA QDVDKAKQLL KDHFSDQDTL SIGEWRDILD
TTRKYALPLL EYFDRIKLTR RQEDVRVYLG NNE
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