| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acid345_4628 |
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| Symbol | |
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| ID | 4070785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Koribacter versatilis Ellin345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008009 |
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| Strand | + |
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| Start bp | 5484374 |
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| End bp | 5486260 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637986668 |
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| Product | selenocysteine-specific translation elongation factor SelB |
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| Protein accession | YP_593702 |
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| Protein GI | 94971654 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.889697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCG TCATAGTGGG GACTGCCGGA CATATTGATC ATGGGAAGAC GGCGCTGGTG
CGCGCGCTGA CGGGGATTGA TACCGATCGG CTCGCGGAGG AGAAGCGGCG CGGGATCACG
ATTGATATTG GGTTCGCGAA CCTCGAACTG GCGGCGGCTT CGGGTGAGAA GCTGCGCATT
GGCTTCGTAG ATGTACCGGG GCATGAGCGA TTCATTCGCA ACATGCTCGC CGGGGTCGGC
GGGATTGATT TGGTGATGCT GATCATCTCG GCGGAAGAAT CCATCAAGCC GCAAACACGA
GAACATTTCG ATATTTGCCG GATGCTCGGG ATTGAACGCG GGCTGACGGT GCTGACCAAG
AGCGACCTCG TGGATGAGGA GACGCTCGAG GTGGTGAAGG CCGAGGCGCG CGAATTTGTG
GCGGGATCAT TTCTTGAAGG TTCTCCGGTA GTGGCGGTGA GTGCGAAGAC AGGCGCAGGG
ATTGCGGAAC TGAAGCTAGA ACTCGCGAGT GTCGCGGTGG AATCCAGGGT GAAGGATGCG
CAGGCGGCGA TGCGGCTGCC CATTGATCGC GTGTTCACCA TGAAGGGACA CGGCACGGTG
GTCACGGGGA CCCTGATCTC CGGCACCGTG AAGAAAGAAC AAGAAGTGGA GGTGCATCCG
CGGGAGATGA AGACGCGGGT GCGCAACGTG CAGGTGCATG GGGCGTCGGC GGAGAGCGCG
GTGGCGGGGC AGCGGACGGC GTTGAACCTG GCGAATGTGG CGGTAGAAGA TTTGACGCGC
GGGATGGTGC TGACCGAGGC GGGGCAATTC CATCCGACGC GGCGCGTGGA TGTGAAGCTG
GAATTGCTGA ACGGAGCACC AGCACTGAAA GATCGCGCGC GAGTGCACTT TCATGCGCAC
ACGGCAGAGA CGGTGGCGGC CGTGTTGCTG CATGAGAAGA AGCCGAAACT GGAGAGCGGC
ACGGCGTATG CGCAGTTGCG GCTGGCGAAG CCGGCGCTGC TGCTGCCGGG AGATCGGTTT
ATTGTGCGGC AGTTTTCGCC GCTGGTAACG ATTGGCGGCG GCGTGGTGCT GGATGCAGAG
CCGCTGGCTT CGCCCGAGCG ACTGGAGTTT TTGCGAACGC TGGAGAGTGG GTATGCGGCC
GAGATTCTCA AGGCGCGCGT GGCGCGAAGG AAGTCGCGTG GGTTGACCGT GGCGGGTGCG
ATCGCGGAGA CGGGATGGAT GCGCGGACAG TTCGCTTCGA GACTGAAGCA GTTGGTGGAA
GCGAAGCAGG TAGTGCAGTT TGGGCAGCAT CTTCTGACAT CGTCGGTTGT GAGCCAGTTG
GAGACGGGGC TGGTGAAACA TGTGAACCGG TTTCACGATG AGAACCGGCT GGTCGCGGGC
ATTGGGAAAG AGACACTACG CGAAAGAGTT GGCGCGGAGC CGGAGATTTT TGCTGGAGTG
CTGGAGAGAT TAGTCGCGGC GAAGAAGTTG ATTGTCAGCG GTGAAGTGGT GCAGGCACCG
GGACGCGGCG TCGCGATGAA GAGCGACGAG TCGGAATCGA AGAAGCTCAT TGAAGATGCG
TTCGCAAAGG CGGGGCTTCA GGTTCCTGCG CTGAAAGATG TATTGGCGGG CGTGAAACTG
GATCACACGC GGGCGCAGCA GGTGGTAACG CTGCTGTTGC GGGATCGCGT GCTGGTAAAG
GTTAGCGAGG AGTTGGTGTT TCATCAGAAC GCGTTGGTGG ATTTGCGAAC GCGGGTGGTG
AGCGCGAAGA GTGCGTCGCC GCGCATTGAT GTTGCAAGGT TCAAAGAGCT GACCGGGCTG
ACGCGGAAGT ATGCGATTCC CCTGCTGGAG TGGCTGGACC GCGAGAGGGT GACGAAGCGA
GTTGGGGAAG AACGGGTGAT TTTGTAG
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| Protein sequence | MKPVIVGTAG HIDHGKTALV RALTGIDTDR LAEEKRRGIT IDIGFANLEL AAASGEKLRI
GFVDVPGHER FIRNMLAGVG GIDLVMLIIS AEESIKPQTR EHFDICRMLG IERGLTVLTK
SDLVDEETLE VVKAEAREFV AGSFLEGSPV VAVSAKTGAG IAELKLELAS VAVESRVKDA
QAAMRLPIDR VFTMKGHGTV VTGTLISGTV KKEQEVEVHP REMKTRVRNV QVHGASAESA
VAGQRTALNL ANVAVEDLTR GMVLTEAGQF HPTRRVDVKL ELLNGAPALK DRARVHFHAH
TAETVAAVLL HEKKPKLESG TAYAQLRLAK PALLLPGDRF IVRQFSPLVT IGGGVVLDAE
PLASPERLEF LRTLESGYAA EILKARVARR KSRGLTVAGA IAETGWMRGQ FASRLKQLVE
AKQVVQFGQH LLTSSVVSQL ETGLVKHVNR FHDENRLVAG IGKETLRERV GAEPEIFAGV
LERLVAAKKL IVSGEVVQAP GRGVAMKSDE SESKKLIEDA FAKAGLQVPA LKDVLAGVKL
DHTRAQQVVT LLLRDRVLVK VSEELVFHQN ALVDLRTRVV SAKSASPRID VARFKELTGL
TRKYAIPLLE WLDRERVTKR VGEERVIL
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