Gene GM21_0034 details

Gene Information

• Locus tag: GM21_0034
• ID: 8135333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sp. M21
• Kingdom: Bacteria
• Replicon accession: NC_012918
• Strand: +
• Start bp: 44778
• End bp: 46688
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644867651
• Product: selenocysteine-specific translation elongation factor
• Protein accession: YP_003019879
• Protein GI: 253698690
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG3276] Selenocysteine-specific translation elongation factor
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00475] selenocysteine-specific elongation factor SelB; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 79
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGCATC TTATTCTCGG CACTGCCGGA CACATAGACC ATGGCAAGAC CTCCCTGGTG 
AAGGCGCTGA CCGGCGTCGA TACCGACCGG CTCAAGGAGG AAAAGGCCCG CGGCATCACC 
ATCGAGCTCG GGTTCGCGCA TCTGGAGCTG CCGGGAGGGT TGCGCTTCGG CATCGTCGAC 
GTGCCGGGGC ACGAGAGGTT CGTGCGCACC ATGGTCGCCG GCGTGGGGGG GATGGACCTG 
GTGCTCCTCG TCATCGCCGC CGACGAGGGG ATCATGCCCC AGACCCGGGA GCACCTGGAG 
ATCTGCCAGC TCCTGGGAGT AAAGCGCGGC ATCGTCGTCC TCACCAAGAA GGACATGGTG 
GAGCCGGACT GGCTCGACCT CGTGACCGAG GAGGTGCGTG AGTATCTGGC CGAGAGCTTC 
CTGGCCGGCG CCCCCATCGT CGCCGTTTCT TCCCGGAGCG GCGACGGCAT AGATTCGCTG 
AAGGCCGAGT TGACCCGGAT GGCGGGAGAG ATCGAGCAGA AGCGGGTCGA CTCCCCCTTC 
CGGCTCCCCG TGGACCGCGT CTTCACCGTG ACCGGCTTCG GCACCGTCGT CACCGGGACG 
CTCCTATCCG GCGCGGTATC GGTCGGGGAC GAGGTGGAAA TCCTTCCCTC CGGCATCGCC 
TGCCGCGTGC GCGGCGTGCA GTCCTTCGGC TCCAAGGTCG AGAAGGGGGG AGCAGGGGAG 
AGGCTTGCGG TCAACCTGCA GGGGGTCGAC CACACGGACG TGGAGCGCGG CGACGTCGTC 
GTACCCAAGG GGCTCTACCA GCCGACCAGC GCCGTCGACG TCAGGCTCAA CTACCTCGCC 
TCCGCGGGGA AGGAGCTGAA GCACCGCGCC ACCGTCAGGC TCCATTCGGC GACCTACGAG 
GTTCCCGCCA AGATCATACT TTTCGACCGG GACGCGCTGC AGCCCGGCGA TAGCGCCTAC 
GTGCAGTTGC GCCTCGCGCG GCCGGTGCTG TTGCTGCCGG GCGACCCGTT CGTGCTGCGC 
ACCTATTCGC CCCAGGCGAC CCTCGGGGGA GGGACCGTCC TCGACCCGGC GCCCCCGAGA 
AGGCGCAGGC GCTCCGTCGA GGCGCTGGAA CTGTTGGCCG CGGCGGAGTC CGGGGCCGAC 
CAGGAGAGGA TCCGCCTCCT GGTGGAGTCG TCGCTTCTGT CGGGGATCTC GGTGCAGGAG 
ATGGTGAACC GCTCCGGCAT GTCCGCAAAA CGGATCGAGG CCGCCTTGGC GCCCCTTCTC 
TCCGGCGGCG CGGCGATCCA GGTGGTGAAG GAGCCCAGGA TCTTCCTGGG CAAGGACGCT 
TTCGCCCAGT TGAAGCAGAA GCTGTCCGAG GAGCTGCGCG ACTACCTGGA AGAAAACCCG 
ATGCAAGAGG GGATTGGGAA GGAAGAGCTG AAATCCCGGA TACCGAAGCG GAGCGACCCC 
CGTTTCTTCG GTCCGCTTTT GGCCAGCATG GAGAAGGAGG GGCAGGCCCT TTCCGACCGG 
GATCTGGTCA AGCTCCCCGG GCGCAAGGCC GGCGTGACCC AGGACCAGGC GAGCGTTCAG 
GCGGCGCTGG AGGAGGCGCT GAAAAAGGGA TGGTGCGAGC CTCCCACCCT GAAGGAGCTT 
TGCGACATGC TCGGCTGCAC CGAGAAGCAG GTCCTCGATC ATGCGAACCT GCTCGCCCGT 
GAAGGGAGGG TGGCGAAGAT CAAGGGGGAT ATTTTCTATG CCCCCGGGGC CGTAGCCGAG 
GTGCGCGAGA AGCTCGTGGC GCGGCTGAAG GAAAAAGGGG AGATCACCCC CCCGGAGTTT 
CGAGAGATCA CGGGCCTAAG CCGTAAGTTC ATGATTCCGC TGTTGGAGTA CTTCGACAGC 
GAGAAGCTCA CCATCAGGAT GGGGGACAAG AGGATATTGC GGAAGGGATG A 

 

Protein sequence

MKHLILGTAG HIDHGKTSLV KALTGVDTDR LKEEKARGIT IELGFAHLEL PGGLRFGIVD 
VPGHERFVRT MVAGVGGMDL VLLVIAADEG IMPQTREHLE ICQLLGVKRG IVVLTKKDMV 
EPDWLDLVTE EVREYLAESF LAGAPIVAVS SRSGDGIDSL KAELTRMAGE IEQKRVDSPF 
RLPVDRVFTV TGFGTVVTGT LLSGAVSVGD EVEILPSGIA CRVRGVQSFG SKVEKGGAGE 
RLAVNLQGVD HTDVERGDVV VPKGLYQPTS AVDVRLNYLA SAGKELKHRA TVRLHSATYE 
VPAKIILFDR DALQPGDSAY VQLRLARPVL LLPGDPFVLR TYSPQATLGG GTVLDPAPPR 
RRRRSVEALE LLAAAESGAD QERIRLLVES SLLSGISVQE MVNRSGMSAK RIEAALAPLL 
SGGAAIQVVK EPRIFLGKDA FAQLKQKLSE ELRDYLEENP MQEGIGKEEL KSRIPKRSDP 
RFFGPLLASM EKEGQALSDR DLVKLPGRKA GVTQDQASVQ AALEEALKKG WCEPPTLKEL 
CDMLGCTEKQ VLDHANLLAR EGRVAKIKGD IFYAPGAVAE VREKLVARLK EKGEITPPEF 
REITGLSRKF MIPLLEYFDS EKLTIRMGDK RILRKG