Gene CCC13826_0756 details

Gene Information

• Locus tag: CCC13826_0756
• Symbol: selB
• ID: 5595912
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter concisus 13826
• Kingdom: Bacteria
• Replicon accession: NC_009802
• Strand: +
• Start bp: 298692
• End bp: 300512
• Gene Length: 1821 bp
• Protein Length: 606 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 640928899
• Product: selenocysteine-specific translation elongation factor
• Protein accession: YP_001466209
• Protein GI: 157165277
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG3276] Selenocysteine-specific translation elongation factor
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00475] selenocysteine-specific elongation factor SelB; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTAA TAATAGGAAC AGCAGGGCAT ATCGACCACG GAAAAACCGC GCTTATAAAG 
GAGCTAAACG GCTTTGAGGG GGATAATCTT GAAGAGGAGA AAAAGCGTGG CATAACGATC 
GATCTAAGCT TTTCAAATTT AAGCAAAAAT GATGAAAATA TCGCATTTAT CGACGTGCCA 
GGACATGAAA ATCTCATAAA AACGATGATA AGTGGCGCGT ATGGCTTTGA TGCGTGCTTG 
TTTGTGGTGG CGGCAAATGA CGGGCTCATG CCTCAAAGCT TGGAGCACCT TGAAATTTTA 
AATCTCCTTG GCGTGAAATC TATAATCGTG GCGCTTACAA AGTGTGATCT AGTTGATGAG 
GCCACTATAA ATTTAAGAAA AAAAGAGATA AGAGATGAAA TTTCTAAATT TAAAAACCTG 
CAAATTTTAG AAATTTTTGC CGTTAGTATA AAGGATAAGG CGAGTATCGA TGAGCTTAGA 
AACTACCTCT TTACGCTAAG AGCCAAAAAG CGCGATGAGG AGGGCGTTTT TAGATACTAC 
ATCGATAGGG TGTTTAGCCT AAAAGGTATC GGAAATGTCG TAACTGGCAC CGTTATAGAG 
GGAAGCGTTA GTAAAAACGA GAAGCTTTTT AACTACGACG CTGGCAAAGA GGTGCTAGTA 
AGAAGCGTGC AAAGCCACGA TAAATTCGTT GATAGCGCTG GAGTTAGCAG CCGCGTGGCG 
CTTAATCTAA CTGGCATAGA GCTTAGTGAG CTAAAAAAGG GTCAGCTACT TAGCAAAAAG 
GGCTTTTTTA GGGGATTTAG AGAGGTTGAT GCGGTCGTAA CTGCTAAGAA TTTGATACAT 
TCACAAAGCG TAACATTTTG CGTAGGCGCT AAAAACGTGC CTGCAAAGGT GCTAATACTA 
AGCCAAAAAG ATGATAGCTA CTTTGTGAGC TTTAAATTTC AAAGCGATAT GTTTTTAAAA 
TTTGATGAGG CCTTTGTGCT CATCTCAGAT GCGCGCGTGA TAGGTGGCGG CAGGGTGCTA 
AACCCAGTGC TTGAGCCACT AAAAAAGGCT GGCAAAATTC TCTTTTTGGC CTCGCTTTTA 
AAGCATGATT TTGTTGAAGC TTTTTCTATC TTAAAAGAGG CTCACAAAAA TGGCTTTGGC 
ATCATCTCTT CTTATCAAAG ATTTGGTCTA AATCACGAAG AGGCCGTAGC CGTAGCCAAA 
AAAGTCTCAA ACGTCTTTGT CGATGAAAAG GCTTTAAATA TCTACGATCT AAGCGCGGTT 
GAGCGGATAA AATCAGCCAT TAAATTTATG ATAGAAAAGA ATGAATTCGC TGTCTTTTCA 
GCTCAAAGTA TCAGCCTAAA ACTTGCTTGG GCTAGCCAAA ATTTAGCCCA AAAAGCGCTT 
GACGAGCTTG AAAGTGCAAA TTTGATCGCC AAAGATAGCG GTGTCTATAC CAAAAAAGGC 
GTTGATCTTA GCAAGCTAAA AGTAAGGCTT GAAGAGAAAA TTTATGAAAT TTTAGAAAGT 
GGCAAGCTAG CCCCAACAGC GCCATATAAT ATATATGATG ATTTAGAGAT CGATAGGGTT 
AGTGGCGACA ATGCCCTTAA AAAGCTAACC GCAATGGGCA GGGTCATAAG GCTAGAGCAT 
AACCTTTTCA TCACAAGAAA TTCACTAAAA ATGGCACTTG ATAAGCTAAG AGATATCATA 
AAAAATCAAG GCTTTGTAAA TGTCACAAAC GCCAAGGATG CGCTAAATTT AAGTAGAAAA 
TATATAATCG CCTACCTTGA GCAGCTCGAT CTTGAGAGTG ACATAATGAA GCAAGGAAAT 
GATAGGGTTT TTCGCAGTTA G 

 

Protein sequence

MSLIIGTAGH IDHGKTALIK ELNGFEGDNL EEEKKRGITI DLSFSNLSKN DENIAFIDVP 
GHENLIKTMI SGAYGFDACL FVVAANDGLM PQSLEHLEIL NLLGVKSIIV ALTKCDLVDE 
ATINLRKKEI RDEISKFKNL QILEIFAVSI KDKASIDELR NYLFTLRAKK RDEEGVFRYY 
IDRVFSLKGI GNVVTGTVIE GSVSKNEKLF NYDAGKEVLV RSVQSHDKFV DSAGVSSRVA 
LNLTGIELSE LKKGQLLSKK GFFRGFREVD AVVTAKNLIH SQSVTFCVGA KNVPAKVLIL 
SQKDDSYFVS FKFQSDMFLK FDEAFVLISD ARVIGGGRVL NPVLEPLKKA GKILFLASLL 
KHDFVEAFSI LKEAHKNGFG IISSYQRFGL NHEEAVAVAK KVSNVFVDEK ALNIYDLSAV 
ERIKSAIKFM IEKNEFAVFS AQSISLKLAW ASQNLAQKAL DELESANLIA KDSGVYTKKG 
VDLSKLKVRL EEKIYEILES GKLAPTAPYN IYDDLEIDRV SGDNALKKLT AMGRVIRLEH 
NLFITRNSLK MALDKLRDII KNQGFVNVTN AKDALNLSRK YIIAYLEQLD LESDIMKQGN 
DRVFRS