| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_63530 |
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| Symbol | selB |
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| ID | 4383276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 5663163 |
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| End bp | 5665088 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639327734 |
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| Product | selenocysteine-specific elongation factor |
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| Protein accession | YP_793272 |
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| Protein GI | 116052955 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.440984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGTCG GCACCGCCGG GCACATCGAC CACGGCAAGA CCTCGCTGCT GCGCGCCCTC
ACCGGCATCG AGGGCGACCG CCGCCCGGCC GAGCGCCAAC GCGGGATCAC CATCGACCTG
GGCTATCTCT ACGCCGACCT TGGCGACGGC AGCCCCACCG GCTTCATCGA CGTGCCCGGT
CACGAGCGCT TCGTCCACAA CATGCTGGCC GGCGCCAGCG GCATCGATTG CGTGCTGCTG
GTGGTGGCCG CCGACGACGG CCTGATGCCG CAGACCCGCG AGCACCTGGC GATCGTCGAA
CTGCTCGGTA TCCGCCGGGC GCTGGTGGCG CTGACCAAGA TCGACCGGGT CGAGCCGCAG
CGGGTGCAGC AGGTGCGGAC CCAGGTCGAA CACCTGCTGG CCTCCGGCCC GCTGGCGCGC
TCGCCGATCT TCCCGCTCTC CAGCAGCACC GGGGAGGGCG TCGCGGCGTT GCGCGAAGCA
CTCGGCGGGC TCGCCGGCGA AGTCCGCGAG CGTAGCCGCG AGGGATACTT CCGCCTGGCG
GTGGACCGGG CCTTCAGCGT CGCCGGCAGC GGCATCGTGG TCACCGGCAC GGCCTTCTCC
GGACAGGTCG CGGTGGGCGA CGAACTGCTC CTCGGCAACG CCGGACGGCC GGTGCGGGTG
CGCGGCCTGC ACGCGCAGAA CCGGCCCGCG CAACAGGCCT GGGCCGGCCA GCGCGTGGCC
CTGAACATCG CCGGCGAGCG CCTCGCGCTG GAACAGATCC AGCGCGGCGA CTGGCTGCTG
CAGGCAGCGC TGCACGCGCC GACCACGCGG GTCGACATCG ACTTCCGCCT GTTGCCCGAC
GAACTTCGCG ACTTCACCCA CTGGACCCCG GTGCACCTGC ACCTGGGCAC CCAGGACGTC
ACCGGGCGCC TGGCCCTGCT CGAAGGCGAA CAACTGGAGC CTGGCCACCG CGCCTTCGCC
CAACTGGTGC TGAACGCGCC GATCCAGGCC CTGCACGGCG ACCGCCTGGT GCTGCGCGAC
CAGTCGGCGC AGCGCACCCT TGGCGGCGGG CGGGTGCTCG ACGGCGCCGC GCCGGCGCGC
AACCGACGAA CGCCGGCACG TCTGGCACAG CTCCAGGCGC TGCGCCAGGA AAGCCTGGAG
GAGGCGCTGC CGACCTTGCT CGGCGCGGCC GAGAACGGCC TCGACCCGCA ACGCCTGGTG
CAATCCTTCA ACCGCCCGCG CGAGCACTGG CGGCTGCCGG AAGAGGTGGT CGAGGTGCAG
ACCCGCCTCG GCCCCCGGTT GTTCGCCGGG GAGCGCTGGT TCGCCCTGGT CGAGCAACTG
CTCGCCGGCC TGCGGCGCTT CCACGAAGAG CTACCGGACG AACTCGGTCC CGACCGCGAC
CGCCTGCGTC GCTACGCCCT GCCGCAGCTG GAGCGGCCGG TGTTCATCGC CTTGCTCGAG
GCCGCCCTGG CCGGCGGCGA CGTGCACAGC AGCGGGCCCT GGCTGCACCT GCCCGGCCAT
GAAGTGCGCC TGAGCGATAG CGAGGAGCAA CTGCGCGCGC GCCTCTGGCC GCTGCTCGAA
GCCGGCCGCT ACGACCCGCC CTGGGTTCGC GACCTGGCCC GCGAGCTGCG CCAGGACGAA
GCCGCCATGC GCAACCTGCT GCGCAAGCTG GCGCGCCTGG GCCAGTTGCA GCAGGTGGTG
CGCGACCTGT TCTACCCGGA AGCCACCCTG CGTCAATTGG CCGAGATCGC CGTGCAGGTC
CGCGACCCCG CCGGGCTGAT CCGCCCGGCG GAATTCCGCG ACCGCCTGGG CATCGGCCGC
AAGCGCAGCA TCCAGATCCT CGAGCACTTC GACCGCATCG GCCTGACCCG CCGCATCGGC
AACGACCGTC GCCTGCGCGA GGGCTCGGCG CTGGCCGAAC AGTTGCTCGG CGGCGTCTCG
CCCTGA
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| Protein sequence | MIVGTAGHID HGKTSLLRAL TGIEGDRRPA ERQRGITIDL GYLYADLGDG SPTGFIDVPG
HERFVHNMLA GASGIDCVLL VVAADDGLMP QTREHLAIVE LLGIRRALVA LTKIDRVEPQ
RVQQVRTQVE HLLASGPLAR SPIFPLSSST GEGVAALREA LGGLAGEVRE RSREGYFRLA
VDRAFSVAGS GIVVTGTAFS GQVAVGDELL LGNAGRPVRV RGLHAQNRPA QQAWAGQRVA
LNIAGERLAL EQIQRGDWLL QAALHAPTTR VDIDFRLLPD ELRDFTHWTP VHLHLGTQDV
TGRLALLEGE QLEPGHRAFA QLVLNAPIQA LHGDRLVLRD QSAQRTLGGG RVLDGAAPAR
NRRTPARLAQ LQALRQESLE EALPTLLGAA ENGLDPQRLV QSFNRPREHW RLPEEVVEVQ
TRLGPRLFAG ERWFALVEQL LAGLRRFHEE LPDELGPDRD RLRRYALPQL ERPVFIALLE
AALAGGDVHS SGPWLHLPGH EVRLSDSEEQ LRARLWPLLE AGRYDPPWVR DLARELRQDE
AAMRNLLRKL ARLGQLQQVV RDLFYPEATL RQLAEIAVQV RDPAGLIRPA EFRDRLGIGR
KRSIQILEHF DRIGLTRRIG NDRRLREGSA LAEQLLGGVS P
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