| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3882 |
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| Symbol | selB |
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| ID | 6516778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 3750320 |
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| End bp | 3752170 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642748855 |
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| Product | selenocysteinyl-tRNA-specific translation factor |
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| Protein accession | YP_002116618 |
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| Protein GI | 194735632 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTATTG CAACTGCCGG ACACGTAGAC CACGGTAAAA CAACGTTGCT CCAGGCGATT
ACCGGGGTCA ATGCCGACCG TCTGCCGGAA GAGAAAAAAC GCGGGATGAC TATCGATCTG
GGTTACGCCT ATTGGCCGCA GCCGGATGGC CGTGTGCTGG GCTTTATCGA TGTGCCTGGG
CATGAAAAAT TCCTCTCTAA CATGCTGGCG GGCGTAGGCG GTATCGATCA CGCTTTGCTG
GTGGTCGCCT GTGATGACGG CGTCATGGCG CAAACGCGCG AGCATTTACA GATCCTGCAA
CTGACGGGCA ATCTCCAGCT CACCGTCGCG CTGACCAAAG CCGATCGCGT GGACGAGGCG
CGTATCGGTG AAGTACGAGA AGAGGTACTG GCGGCGCTCG ACAACTATGG CTTCGCCGAT
ACCGTTTTAT TTGTCACCGC TGCCAATGAA GGACACGGTA TTGCAGAACT TCGCGCTCAT
TTACAGCAGC TTCCTGCACG TTTGCACGCC GCGCAGCATC GCTTCCGTCT GGCTATCGAC
CGTGCGTTTA CGGTGAAAGG GGCGGGACTG GTGGTGACCG GAACGGCGCT GAGCGGAGAG
GTGAAGGTAG GTGATACGCT GTGGTTAACC GGAGTAAATA AACCGATGCG GGTGCGTAGC
CTGCACGCAC AAAATCAGCC TACCGACCAT GCGCACGCCG GGCAACGTAT TGCGCTCAAT
ATTGCGGGCG ATGCGGAGAA GGAACAGCTT AACCGCGGCG ACTGGCTGCT TTCCGATGCG
CCGGTGGGGG AAGCTTTTTC CCGGGTGATC GTTTCTCTGG CACTTCATGC GCCGCTTTCC
CAATGGCAGC CGCTACATAT TCACCATGCC GCCAGCCATG TGACCGGTCG CGTCTCTTTG
CTGGAAGGCG GGCTGGCCGA GCTGATCTTC GATACGCCGT TGTGGCTGGC CGATAATGAC
AGACTGGTGC TGCGTGATAT TTCCGCACGC GCCACCCTTG CCGGCGCACG CGTGGTGACG
CTTAAGGCGC CGCGTCGCGG TAAACGTAAG CCAGATTATT TGCACTGGCT TTCAACGCTT
GCCGCCGCGC AGGACGATAG CGCGGCGTTG GCCATTCATC TGGAACGCGG CGCCGTCAAC
CTGCCGGATT TCGGTTGGGC GCGTCAGCTT AATCCTCTCG GTATGCGTCA GCTTATTGAG
CAACATGGTT TTATCCAGGC CGGAGACAAT CTGCTAAGCG CGCCCGTCGC CGCCCGCTGG
CAGCGTAAGA TTCTCGATAC GCTGGCGACC TACCACGAAC AGCACCGCGA TGAACCGGGG
CCGGGACGCG AGCGTTTACG CCGCATGGCC CTGCCAATGG AAGATGAAGC GCTGGTCCTG
ATGCTGATCG AGCGGATGCG CGACGACGGC CTGATTCATA GCCATCACGG TTGGTTGCAT
CTGCCGGATC ATAAAGCGGG ATTTAGCGAT GAGCAGCAGG CCGTCTGGCA AAAAGTTGAA
CCGCTATTTG GCGATGAGCC CTGGTGGGTA CGCGATCTGG CGAAAGAGAC CGGAACGGAA
GAACAATTGA TGCGGCTGGT GCTGCGGCAG GCGGCACAGC AAGGCATCAT TACCGCGATC
GTAAAAGATC GGTACTATCG TAACGATCGG ATTGTCGCTT TCGCCAATAT GATCCGCGAG
CTGGATCAAG AGAGAGGATC AACGTGTGCG GCGGATTTTC GCGACAGGCT GAATGTAGGG
CGGAAACTGG CTATTCAGAT TCTTGAATAT TTTGACCGGA TTGGATTTAC ACGACGCCGT
GGGAATGAGC ATTTATTACG TGATGCATTA TTATTTCCGC AAAAAGAATG A
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| Protein sequence | MIIATAGHVD HGKTTLLQAI TGVNADRLPE EKKRGMTIDL GYAYWPQPDG RVLGFIDVPG
HEKFLSNMLA GVGGIDHALL VVACDDGVMA QTREHLQILQ LTGNLQLTVA LTKADRVDEA
RIGEVREEVL AALDNYGFAD TVLFVTAANE GHGIAELRAH LQQLPARLHA AQHRFRLAID
RAFTVKGAGL VVTGTALSGE VKVGDTLWLT GVNKPMRVRS LHAQNQPTDH AHAGQRIALN
IAGDAEKEQL NRGDWLLSDA PVGEAFSRVI VSLALHAPLS QWQPLHIHHA ASHVTGRVSL
LEGGLAELIF DTPLWLADND RLVLRDISAR ATLAGARVVT LKAPRRGKRK PDYLHWLSTL
AAAQDDSAAL AIHLERGAVN LPDFGWARQL NPLGMRQLIE QHGFIQAGDN LLSAPVAARW
QRKILDTLAT YHEQHRDEPG PGRERLRRMA LPMEDEALVL MLIERMRDDG LIHSHHGWLH
LPDHKAGFSD EQQAVWQKVE PLFGDEPWWV RDLAKETGTE EQLMRLVLRQ AAQQGIITAI
VKDRYYRNDR IVAFANMIRE LDQERGSTCA ADFRDRLNVG RKLAIQILEY FDRIGFTRRR
GNEHLLRDAL LFPQKE
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