| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_2084 |
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| Symbol | selB |
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| ID | 4203963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 2310726 |
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| End bp | 2312633 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642566634 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_699393 |
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| Protein GI | 110801739 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATG TGATTATAGG AACATCAGGG CATATAGATC ATGGTAAAAC AACTCTTATA
AAGGCTTTAA CAGGTAGGGA AACTGATAAG CTTGATGAAG AAAAGAAAAG AGGTATATCA
ATTAACTTAG GGTTTACTTT CTTTGATTTG CCTTCAGGAA AAAGAGCAGG CATAATAGAT
GTTCCAGGGC ATGAAAAATT CATCAAAAAT ATGTTAGCAG GAGCTACATC ACTAGATGTA
GTTCTTCTAA TTATTGCCCT AGATGAAGGA ATAATGCCTC AGACAAAGGA ACATTTAGAA
ATATTAGAAC TTTTAGAAGT TAAAAAGTGT ATAGTTGCTT TAACTAAAAG GGATTTAGTT
GATGAAGAAT GGGCAGAAAT GATAAAAGAA GATATAAAGA ATTATTTAAA ATCAACTAGT
TTTAAAGATG CAACCATGAT AGATGTTTCT TCTAAAACTA AAGAAGGAAT TAATGAATTA
ATAACTGAGA TAGATAGTGC AGTAGAAGAA ATAGAGCAAA AGGATAAGGA AGGCCATTTT
AGACTAGCTG TTGATAGAAG CTTTTCAGTA AGTGGATTTG GAACAGTAGC TACAGGAACT
ATATTAAGTG GAAGTGTAAA ATTAGGCGAT TTAGTTCAAA TTAATCCAAG TGGAGTAGAA
GCTAGAGTTA GAAATATTCA AGTTCATGAT GAGAATGTTG AAATAGGGGA AGCTGGTCAA
AGATGTGCAT TAAACTTATC AGGAGTTACT AAAGAAGAAG TAACTAGAGG AATGGTTGTT
TGTACTTCTA ATACTATTGA GCCATCTTAC ATGGTAGATT GCAAGTTTAG ATATCTAAAG
TCCAATGAAA AAAACTTAGT TAATAGACAG AGGGTAAGAA TATATCATGG TACGTCAGAG
ATATTTGGAA GAATAGTCCT ACTTGATAAA GAAGAGGTAA AGCCTGGTGA AGAGGCGTAT
ATACAGTTAA GATTAGAAAG TGAAATATGC GCTCAAAATG GTGATAACTT AGTCATAAGA
AATTATTCTC CTATGACAAC CTTAGGGGGA GGTAAAATAA TAAATCCCTT AGCAAAAAAG
GCTAAAAGGT TTAAAGAGGA TTATTTAAAT GAACTAAAGC TTATGGAAAA AGGTAGCATA
GAGGATATAA TTGAAAATGT AGTACTATCT TTAAGTGAAA CCTTCCCAAA CTCACAAGAG
GTCATAAAAG GACTAGGAAG AAATATAGAA AATATAGATT TTATATTGGA AAAGCTTTGT
GAGGATAAGA AAATTATAGG AATAGATAAT GGTAAATCTA AAGTATTTAT TCATAATAAA
TTTTTCACTA AAAAGAGTGA AGAAATTTAT GAAATTCTAA GAAGATTCCA TGAAGAAAAT
CCATTAAAAG TAGGCATGAA CAAGGAAGAA CTTAGAAGTA AGAGTTTTTC AAATAAGATT
AAGCAAAAAA TATTTCAAAG TTTCTTAGAA CTTATGAAGG AAAAAGAGAT GATAAAAGAA
GGGATTAATA TAATTTCACT AAAGGATTTT GAGATAAAAC TAACAAAAGC TCAAAATGGG
ATTAGGGAAA AAATATTAAA AGCTTATTTA GAAAGTGGAA TAGTTTCTCC AAAGATAAAA
GACATCATTG AAGATAAAAA GTTAGAAAAG GAGTATATAA AAATATATAA CCTTTTAATT
GAAGATGGAA CTTTAATTAA ACTTCCAGAA GATGTTGTAA TGCACAAAGA GATATTACAA
GGGGTTAAAG ATAAAATAAT AGAATGGTTA AATAAAAATG GTTCTATTAC TTTAGGAGAA
ACTAAGGAGA TTTTAGGAGT TTCTAGAAAG TATTTAGTAG CAATTTTAGA GTATTTAGAC
AATGAAGAAA TAACTAAAAG AGTAGAAGAT AAGAGAGTTT TAAATTAA
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| Protein sequence | MKHVIIGTSG HIDHGKTTLI KALTGRETDK LDEEKKRGIS INLGFTFFDL PSGKRAGIID
VPGHEKFIKN MLAGATSLDV VLLIIALDEG IMPQTKEHLE ILELLEVKKC IVALTKRDLV
DEEWAEMIKE DIKNYLKSTS FKDATMIDVS SKTKEGINEL ITEIDSAVEE IEQKDKEGHF
RLAVDRSFSV SGFGTVATGT ILSGSVKLGD LVQINPSGVE ARVRNIQVHD ENVEIGEAGQ
RCALNLSGVT KEEVTRGMVV CTSNTIEPSY MVDCKFRYLK SNEKNLVNRQ RVRIYHGTSE
IFGRIVLLDK EEVKPGEEAY IQLRLESEIC AQNGDNLVIR NYSPMTTLGG GKIINPLAKK
AKRFKEDYLN ELKLMEKGSI EDIIENVVLS LSETFPNSQE VIKGLGRNIE NIDFILEKLC
EDKKIIGIDN GKSKVFIHNK FFTKKSEEIY EILRRFHEEN PLKVGMNKEE LRSKSFSNKI
KQKIFQSFLE LMKEKEMIKE GINIISLKDF EIKLTKAQNG IREKILKAYL ESGIVSPKIK
DIIEDKKLEK EYIKIYNLLI EDGTLIKLPE DVVMHKEILQ GVKDKIIEWL NKNGSITLGE
TKEILGVSRK YLVAILEYLD NEEITKRVED KRVLN
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