| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_0106 |
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| Symbol | selB |
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| ID | 1168003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 115656 |
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| End bp | 117677 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637342118 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | NP_715748 |
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| Protein GI | 24371706 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTATGG TCACTGCGGG CCATGTCGAC CACGGTAAGA GCACGCTCAT CCGTGCCTTG
ACGGGCATGA ACACCGACAG GCTCCCCGAA GAAAAACGCC GTGGCATGAC TATCGATCTC
GGCTACGCTT TTATGCCACT GCGAGATGGC ACTCGACTGG CTTTTATCGA TGTCCCCGGC
CATGAAAAAT TCATCAATAA CATGCTGGTG GGCGTGAGTC ATGTGCGCCA CGCGCTGCTG
GTGTTGGCCT GTGACGACGG GGTGATGCCA CAAACCCGCG AGCATCTGCA AATCCTCGCC
CTCTTACCGC TCAATAGTTT GACCTTAGTG CTGACCAAGC GGGATTTGGT CGATGACCAA
ACCGCCGCCA AGTTGGCTTC AGAGGGAATA ACGCTGCTGG CAGAATACGG TATTGAGGCC
AGTGGCGTAT TTGAGGTCTG CGCTAGTGAT GCAGGTGATG CGGGGGTAGA AACCCTTAAA
CAACATATTT TGGATATTGC CGAGCAGCAA TCGACCCAAG CGGAAGATGC CAGCAGTTTT
AGGATGACGC TCGATCGCGC CTTTAGCGTT AAAGGTGTGG GCTGTGTGGT TACTGGCACT
GTGATTAGCG GCAGTGTGTG TGTTGGCGAT AGCCTCTACA GCTCAGGGCA AAAGGCGAAA
TTACGGGTGC GCGGCATTCA CTGCCAAGGG ATGGAAGTCC ATAGAGCCTT AAGTGGCACT
CGGGTCGCTT TGAATCTTAC CGGTGTTGAT AACCACAGAG CACCTGCCCG CGGTGATTGG
TTAAGCAGTC TGCCTCAGGC TGATTTGTGC GCTAGACCTG TAGTACACAT TCGCAGTTTT
GAACCCTTAA CCCATTGGCA AAATGTTCAT TGTCACCACG GCGCCGACCA CACCTTAGGG
CGAGTATCGC TTCTGGATGA GGCCGATGGG CAGGGGCGTT ATCTGGCCGA AATTGTGCTC
GATAAACCGC TGCTGCTATG TCAGGACGAC CCGATAGTGC TCAGGCATAT TGGCGGCAAG
CAAACGCTGG GCGCTGGGCG GGTGCTGGCA TTAAAAGTTT CCAATCGTAA AAAGCGTACG
CCTGAGCGTG TCAGTAAGCT GCAACAGCTG GCTCAGCTCA CCAATCCGGT GAATGTGCTG
GCGCTACTCG GCCAGAGTGA GGCGCTCAGT ATTGATGAAA TCCGTTGGCG CTGGCAGCTA
ACCGATGAAG GGCTTGCCGC CATGTTAGCG CAGGCGGGGC TGACTCGGAT TGGCGCCTAC
GGGCTATCGA CTCAGTTGCT TGAGCAAGAA AAACAGCAGT TTATCGATCT GTTACGTGAA
TATCACCAAG AGCATCCCGA CCAATTAGGG CTGGGGCGCA ATCGTCTGCA ACGTATGAGT
CATAGCGTAT TGCCTAGCGA GCTTGCCAAT AAGGTGCTCG ATAGCCTCTG CCAAGAGGGG
CAGATGGCGC TGCGCGGTGC CTTGTTACAG CTGGCGGATC ACAGGATTGT CCTCGATAGC
GAGGCGCAGC AGTGCTGGCA GCGTTTAGCC CCTTGGCTGG CGCAGCAAAC GTCCCCTGTG
TGGGTGACTG AGATGGGGGA ATATCTGGAT CTCGAGCCCG CCAAACTTCG ATTGCTGTGC
TTTCAACTGG TGCAACAGGG CTTTATTACC GCGGTGGTGA AGGACAGGTA TCTGCTGAGT
GAGCAGCTGT GCCACTACGC CAATCTAGTG CGAGAACATG TGGACACCCA CGGTAAGCTC
GAAACCGCAG AGTTTAAAGA CATGATTGGC CTTGGCCGTA AGGTAAGCAT TCAATTACTG
GAGTTTTTTG ACCGCAGCGG TTTTACCCGC AGGAAGTTTC GCAGCAACAG TCGGGAAATT
CGGGATGGGG AACTGTTTTA TTCCCATGAG AATTGGCGGA AGAACATAGG AGTCGAACCT
ACCCAGGACT GCTGGCAGCC CTACCCGGAT TTGAAATCCG GACGCCTCAC CGGAGACGAC
GTTCTTCCAA TAGAAGACAA CTTGATAGTA GAAAATGTGT AA
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| Protein sequence | MIMVTAGHVD HGKSTLIRAL TGMNTDRLPE EKRRGMTIDL GYAFMPLRDG TRLAFIDVPG
HEKFINNMLV GVSHVRHALL VLACDDGVMP QTREHLQILA LLPLNSLTLV LTKRDLVDDQ
TAAKLASEGI TLLAEYGIEA SGVFEVCASD AGDAGVETLK QHILDIAEQQ STQAEDASSF
RMTLDRAFSV KGVGCVVTGT VISGSVCVGD SLYSSGQKAK LRVRGIHCQG MEVHRALSGT
RVALNLTGVD NHRAPARGDW LSSLPQADLC ARPVVHIRSF EPLTHWQNVH CHHGADHTLG
RVSLLDEADG QGRYLAEIVL DKPLLLCQDD PIVLRHIGGK QTLGAGRVLA LKVSNRKKRT
PERVSKLQQL AQLTNPVNVL ALLGQSEALS IDEIRWRWQL TDEGLAAMLA QAGLTRIGAY
GLSTQLLEQE KQQFIDLLRE YHQEHPDQLG LGRNRLQRMS HSVLPSELAN KVLDSLCQEG
QMALRGALLQ LADHRIVLDS EAQQCWQRLA PWLAQQTSPV WVTEMGEYLD LEPAKLRLLC
FQLVQQGFIT AVVKDRYLLS EQLCHYANLV REHVDTHGKL ETAEFKDMIG LGRKVSIQLL
EFFDRSGFTR RKFRSNSREI RDGELFYSHE NWRKNIGVEP TQDCWQPYPD LKSGRLTGDD
VLPIEDNLIV ENV
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