| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_04260 |
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| Symbol | |
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| ID | 8371936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Kytococcus sedentarius DSM 20547 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013169 |
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| Strand | + |
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| Start bp | 415873 |
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| End bp | 417765 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644990722 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_003148265 |
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| Protein GI | 256824305 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00475] selenocysteine-specific elongation factor SelB |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.974892 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCGCG TCCTGGCCAC GGCCGGGCAC GTGGACCACG GCAAGTCCAC CCTCGTCCGC
GCCCTCACCG GCCGCGACCC CGACCGGCTC GCGCAGGAGA AGGAGCGCGG CCTCACCATC
GAGCTCGGCT TCGCGTGGAC CACGCTGCCA GATGGGGCCG AGGTGGCCTT CGTCGACGTG
CCGGGGCACC GCCGGTTCAT TGGGACCATG CTGTCGGGGC TGGGGCCGGC GCCCGCGGTG
GTCTTCGTGG TGGCGGCCGA CCAGGGCTGG CAGGCCCAGT CCTCCGAGCA CCTCGCGGCC
GTGCAGGCGC TGGGTCTCCG ACGCCTGTTG CTGGTGGTCA CCCGGGCGGA CCTGGCGGAC
CCGGCCCCCA CGCTCGCCGC CGCGCGCGAG CGGTTGGCCG CTGCCGGCAT CGAGCCGCTG
GGCGAGGTGG CCGTCTCGGC GGTGACGGGT CAGGGGATGG ACGACCTGCG CGCCGCCCTC
GACGGCCTGG TCGCGTCGCT GCCGGAGCCG GACGCCACCG CACCCGTGCG CCTGTGGGCC
GACCGGGCGT TCACCGTCGG CGGCAGCGGC ACCGTGGTGA CCGGCACCCT CGGGGCGGGC
ACGCTGCGGG TCGGAGACGA GCTCGAGCTG CTGGACGAGC AGGGCCATCG CGCGTCGGTG
CAAGTGCGCG GGCTGCACAG TCAGGACGTC GAGCGCGCGG AGGTGGGCCC CGTCTCGCGG
GCGGCGGTGA ACCTGCGACG GGTGCAGCGC GATGCGGTGG GGCGCGGGGC CGTGCTGCTC
ACCCCGGGTG CGTGGGAGGC GGCGCGGGTG GTGGACGTGA CGCTCGGGCC GGCGGGGGAT
GGCGGTGCGA CCACCGGGGC CGGTGTAGGG GCGGCCAGCG CGGGGGCACC CAGTGCGGGG
GCAGCCGTTC CGCCGGAGCG AGTCACCCTG CACGTGGGCA CCGCGGACCT CGAGGTGCAC
TGCCGCGCTC TGGGCGCCGG TCACGCCCGG CTGACGCTCC CGGTGGACCT GCCGTGGCGG
GTGGGCGACC GGGTGATCCT GCGTGATCCG GGCTCCCGCC ACCTGTGGGC CGCGGTGGTG
CTCGACGCCG ACCCGTTGCC GCTGCGCCGT CGAGGGGCAG CCCGGGAGCG GGGCGAGGCC
CTGACCGCGG CCGGCACCGA TGGGGTGCGC CTGCGCCGCG TGCGTCTGGC CGGGCGCCGG
GTGGAGCCCG CGGCGCGCCT CGAACGGCTG GGCCTGGGGG CCGCCTCGCC GGACCCCAGT
GGCAGCACGG ACCCGCCGGG TGGCCCCGCT GAGGGGTCGG AGCGCCGCAT CGCTGATCTC
GTGGTCGACC CGGCGGCCTG GCAGTCCTGG CGTGACGCGC TGGCCGCCAC CGTGCGCACC
CACCACCAGG ACCAACCGCT CAGCGCCGGG CTGACGCCAG CGGAGGCCGC CCACGCCATC
GATCTGCCGT CCCAGCACGC CGCCACCCTG CTGCCCGCGC TGGCCGCCGC GGCCGGGCTC
ACCCTGCAGG ACGGCCGCGT GCGCGATCTG CAGGCCGGCG GGTTGGGCCC CGCGGAGCCC
GGCATCGCGC AGGTGGAGGC GTGGTTGCGG GAGGATCCCT TCGCCGCCCC CGAGGCGCGC
GACCTGGACG ACCTCGGGGT GGGCGCGCGG GAGCTGGCCG CCGCCGTCCG GCTGGGGCGG
GTGCTTCGCC TGCCCGGCGA GGTGGTGCTG CTGCCCGACG CCCCCGCACG GGCGATGCGG
GAGCTCGTCG GCCTGCCGCA GCCGTTCACC ACCAGCCAGG CCCGGCAGGC GCTGGGCACC
ACGCGGCGGG TGGCAATCCC GCTGCTGGAG CACCTGGACG CCCGCGGCTG GACGCGCCGG
GTGGACGCGC AGACGCGGGA GGTCGTGCGC TGA
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| Protein sequence | MRRVLATAGH VDHGKSTLVR ALTGRDPDRL AQEKERGLTI ELGFAWTTLP DGAEVAFVDV
PGHRRFIGTM LSGLGPAPAV VFVVAADQGW QAQSSEHLAA VQALGLRRLL LVVTRADLAD
PAPTLAAARE RLAAAGIEPL GEVAVSAVTG QGMDDLRAAL DGLVASLPEP DATAPVRLWA
DRAFTVGGSG TVVTGTLGAG TLRVGDELEL LDEQGHRASV QVRGLHSQDV ERAEVGPVSR
AAVNLRRVQR DAVGRGAVLL TPGAWEAARV VDVTLGPAGD GGATTGAGVG AASAGAPSAG
AAVPPERVTL HVGTADLEVH CRALGAGHAR LTLPVDLPWR VGDRVILRDP GSRHLWAAVV
LDADPLPLRR RGAARERGEA LTAAGTDGVR LRRVRLAGRR VEPAARLERL GLGAASPDPS
GSTDPPGGPA EGSERRIADL VVDPAAWQSW RDALAATVRT HHQDQPLSAG LTPAEAAHAI
DLPSQHAATL LPALAAAAGL TLQDGRVRDL QAGGLGPAEP GIAQVEAWLR EDPFAAPEAR
DLDDLGVGAR ELAAAVRLGR VLRLPGEVVL LPDAPARAMR ELVGLPQPFT TSQARQALGT
TRRVAIPLLE HLDARGWTRR VDAQTREVVR
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