Gene B21_03396 details

Gene Information

• Locus tag: B21_03396
• Symbol: selB
• ID: 8112596
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli BL21
• Kingdom: Bacteria
• Replicon accession: NC_012892
• Strand: -
• Start bp: 3622482
• End bp: 3624326
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644849569
• Product: hypothetical protein
• Protein accession: YP_003001142
• Protein GI: 251786838
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG3276] Selenocysteine-specific translation elongation factor
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00475] selenocysteine-specific elongation factor SelB; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTATTG CGACTGCCGG ACACGTTGAC CACGGCAAAA CAACCTTATT GCAGGCGATT 
ACTGGCGTAA ATGCTGACCG TCTGCCGGAA GAAAAAAAGC GCGGCATGAC CATCGATCTC 
GGCTATGCCT ACTGGCCGCA GCCGGATGGT CGCGTGCCTG GTTTTATCGA CGTACCCGGT 
CATGAAAAGT TTCTTTCCAA CATGCTGGCG GGCGTTGGTG GTATCGATCA CGCGCTGTTG 
GTGGTGGCGT GCGATGACGG TGTGATGGCA CAGACCCGTG AGCATCTGGC GATTTTGCAG 
CTGACCGGTA ACCCGATGCT GACAGTGGCG CTGACCAAAG CCGATCGCGT GGACGAAGCG 
CGTGTTGATG AGGTTGAACG CCAGGTAAAG GAGGTGCTGC GGGAATACGG TTTTGCTGAG 
GCAAAACTGT TTATCACCGC AGCAACCGAA GGTCGGGGAA TTGATGCCCT GCGCGAGCAT 
CTGCTTCAGT TGCCGGAACG CGAGCACGCC AGCCAACATA GTTTCCGCCT CGCGATTGAC 
CGCGCATTTA CCGTAAAAGG TGCCGGGCTG GTCGTCACCG GTACGGCGTT AAGCGGGGAA 
GTGAAGGTAG GCGATTCACT CTGGCTGACT GGTGTAAATA AACCGATGCG TGTACGTGCG 
CTGCATGCAC AAAACCAGCC AACAGAAACC GCCCATGCCG GGCAGCGTAT CGCGCTTAAC 
ATCGCGGGTG ATGCGGAAAA AGAGCAGATT AACCGTGGCG ACTGGCTGCT TGCCGATGTG 
CCGCCAGAGC CGTTCACTCG GGTGATTGTC GAGCTTCAAA CCCATACGCC GCTGACCCAG 
TGGCAGCCGC TGCATATTCA CCACGCCGCC AGCCACGTTA CGGGACGCGT TTCGCTGCTG 
GAAGATAACC TTGCCGAGCT GGTGTTCGAC ACGCCGCTGT GGCTGGTGGA TAACGATCGC 
TTAGTGTTGC GCGATATCTC GGCCCGCAAC ACGCTGGCGG GGGCGCGTGT GGTGATGCTT 
AACCCGCCGC GTCGCGGTAA ACGTAAGCCG GAATATCTGC AATGGCTGGC GTCTCTTGCA 
CGGGCGCAGA GCGATGCCGA TGCGTTATCT GTTCATCTGG AACGCGGTGC GGTTAACCTT 
GCGGATTTCG CCTGGGCGCG CCAGCTCAAC GGCGAAGGGA TGCGCGAACT GCTGCAACAG 
CCTGGCTATA TTCAGGCTGG TTATAGCTTG TTGAATGCGT CGGTTGCCGC CCGCTGGCAG 
CGGAAAATTC TCGACACATT AGCGACTTAT CATGAGCAAC ATCGCGATGA ACCTGGTCCT 
GGGCGCGAAC GTCTGCGACG TATGGCGTTG CCAATGGAAG ATGAAGCGCT GGTACTGCTG 
CTGATTGAAA AAATGCGCGA AAGCGGCGAC ATCCACAGCC ATCACGGCTG GCTGCATCTA 
CCAGATCACA AAGCGGGCTT CAGCGAAGAG CAGCAGGCCA TCTGGCAAAA AGCAGAGCCG 
CTGTTTGGTG ACGAACCGTG GTGGGTGCGT GACCTGGCAA AAGAGACGGG AACCGACGAG 
CAGGCAATGC GCCTGACGCT GCGCCAGGCG GCGCAGCAAG GAATAATTAC CGCGATCGTC 
AAAGATCGTT ATTACCGTAA CGATCGGATT GTCGAATTTG CCAATATGAT CCGCGATCTC 
GATCAGGAGT GTGGTTCAAC CTGCGCGGCG GATTTCCGCG ATCGCTTAGG CGTAGGCCGA 
AAGCTGGCAA TTCAGATTCT GGAATATTTT GACCGCATTG GCTTTACGCG TCGTCGTGGA 
AATGATCATT TATTGCGCGA CGCATTATTA TTTCCGGAAA AATAA 

 

Protein sequence

MIIATAGHVD HGKTTLLQAI TGVNADRLPE EKKRGMTIDL GYAYWPQPDG RVPGFIDVPG 
HEKFLSNMLA GVGGIDHALL VVACDDGVMA QTREHLAILQ LTGNPMLTVA LTKADRVDEA 
RVDEVERQVK EVLREYGFAE AKLFITAATE GRGIDALREH LLQLPEREHA SQHSFRLAID 
RAFTVKGAGL VVTGTALSGE VKVGDSLWLT GVNKPMRVRA LHAQNQPTET AHAGQRIALN 
IAGDAEKEQI NRGDWLLADV PPEPFTRVIV ELQTHTPLTQ WQPLHIHHAA SHVTGRVSLL 
EDNLAELVFD TPLWLVDNDR LVLRDISARN TLAGARVVML NPPRRGKRKP EYLQWLASLA 
RAQSDADALS VHLERGAVNL ADFAWARQLN GEGMRELLQQ PGYIQAGYSL LNASVAARWQ 
RKILDTLATY HEQHRDEPGP GRERLRRMAL PMEDEALVLL LIEKMRESGD IHSHHGWLHL 
PDHKAGFSEE QQAIWQKAEP LFGDEPWWVR DLAKETGTDE QAMRLTLRQA AQQGIITAIV 
KDRYYRNDRI VEFANMIRDL DQECGSTCAA DFRDRLGVGR KLAIQILEYF DRIGFTRRRG 
NDHLLRDALL FPEK