| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3415 |
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| Symbol | |
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| ID | 3741211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3828728 |
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| End bp | 3830638 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637780705 |
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| Product | selenocysteine-specific translation elongation factor SelB |
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| Protein accession | YP_386352 |
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| Protein GI | 78224605 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACC TCATCCTCGG CACCGCCGGC CATATCGACC ACGGCAAGAC CTCCCTCGTC
CGGGCACTCA CCGGCATCGA CACCGACCGC CTCCCCGAGG AGAAGAAGCG GGGGATCACC
ATCGAGCTCG GCTTTGCCCA CCTGGAACTG CCGGGCGGTC TCCGGTTCGG CATCGTGGAC
GTGCCGGGGC ACGAGCGCTT CGTCCGGACG ATGGTCGCCG GTGTAGGGGG GATGGATCTC
GTGATGCTCG TCATCGCCGC CGACGAGGGG GTCATGCCCC AGACCCGGGA GCACCTGGAG
ATCTGTCAGC TCCTGGGGGT GAAGAAGGGG CTCGTGGCCC TCACCAAGAG CGACATGGTG
GACCCCGAGT GGCTCGGTCT CGTGGCCGAA GAGGTGCGGG AGTACCTGGC AGGGAGCTTC
CTGGAGGAGG CGCCGGTGGT GCCGGTCTCG TCCCGGACCG GCGCGGGGAT CGATGATCTC
AAGGGGGAAC TGGCCCGCCT TGCCGCCCAG GTGGAGGAAA AGCGGAGCGA AGGCCCGTTC
CGCCTCCCCG TGGACCGGGT TTTCACCGTC ACCGGCTTCG GCACGGTGGT GACCGGAACG
CTCCTGGCCG GCGAGATCCG GGTGGGGGAC GAGGTGGAGC TGCTCCCCTC GGGCAGGGAG
GCTCGGGTGC GGGGCGTGCA GACCCACGGC CGGAAGGGAG ATGCGGCCGG CGCCGGGCAG
CGGGTGGCGG TGAACCTCCA GGGGGTCGAG CACACGGAAG TGGTGCGGGG GGACATCGTG
GTGCCCCGGG GTGTTTTTCG GACCACCCGT GCCGTGGATG TCCGCCTCGA CCTCCTCCCA
ACGGCCCCCA AGGAGCTTCG GCACCGGGCC ACGCTCCGGC TCCATTCAGC CACCTACGAG
GTGCCGGCCC AGGTGATCCT TCTGGACCGG GACGTCCTGG CGCCGGGGGA ATCCGCTTTT
GTCCAGCTTC GCCTGAAGCA TCCGGTGCTC CTCCTCCCCG GCGACCCCTT CGTGCTCCGC
TCCTACTCCC CCCAGGTCAC CGTGGGCGGT GGCCGGGTTC TGGACCCGAT ACCTCCCCGT
CGCCGGCGGC GCTCCGATGA GGCGCTGGCG CTTCTTCATG CCTTGGGGGA GCACGCCGAG
GCGGACACCG TCAGACTCCT GGTGGCCGGA AGCCTCCTCT CCGGCGTTGC CTTCGAGGAA
ATATCGCTCC GCAGCGGCCT CTCTCCCCGC AGGGCCGAGG CTGCCCTGGC CTCGCTCCTG
TCGGCCGGCG AGGTGGTGCA GGTGGTCCGG GAACCCCGGA TCCTCCTCTC CCGGGACGCG
TTCGGCTCCC TCAAGTCCCA TCTTCAGGGG GAGGTGGAAG GGTATCTGCG GGATAACCCG
CTGAAAGAGG GGATCGGCAA GGAGGAGTTG AAGACCCGCC TTCCGAAACG GAGTGATCCC
CGTTTCTTCA CGCCACTGCT GACTTCCCTC GAAAAGGAGG GGAAGGTGGT GGTGGAGCGG
GAACTGGTGA AGCTCCCCGG CCGTAAGGGG GAGCCGACCG TGGACCAGTC CGGCCTCCAG
GGGCGGATCG AGGCAGCTCT TCTGCGGGGG GGCTTTGAGC CTCCCACCGT GAAGGAACTG
TGCGACCAGC TCCGCTGCGG CGAGAAGGAG CTTCTGGAGC ACCTGAACAT CCTTGCCCGG
CAGGGGCGGG CCGTGAAGCT CAAGAGCGAC GTGTTCTACC CCCCCGGCCC TGTCGGAGAG
ATCCGGGAGA AACTCGTCGC CCGCCTTCGG GAGAAGGGGG AGATCACCCC ACCGGAGTTT
CGGGAGCTTA CTGGCCTCTC CCGTAAATTC ATGATCCCTC TCCTTGAGTT TTTCGATCAG
GAGAAAATCA CCATCCGGGT TGGTGACAAG CGGATTCTGC GTAAGGGGTA G
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| Protein sequence | MKHLILGTAG HIDHGKTSLV RALTGIDTDR LPEEKKRGIT IELGFAHLEL PGGLRFGIVD
VPGHERFVRT MVAGVGGMDL VMLVIAADEG VMPQTREHLE ICQLLGVKKG LVALTKSDMV
DPEWLGLVAE EVREYLAGSF LEEAPVVPVS SRTGAGIDDL KGELARLAAQ VEEKRSEGPF
RLPVDRVFTV TGFGTVVTGT LLAGEIRVGD EVELLPSGRE ARVRGVQTHG RKGDAAGAGQ
RVAVNLQGVE HTEVVRGDIV VPRGVFRTTR AVDVRLDLLP TAPKELRHRA TLRLHSATYE
VPAQVILLDR DVLAPGESAF VQLRLKHPVL LLPGDPFVLR SYSPQVTVGG GRVLDPIPPR
RRRRSDEALA LLHALGEHAE ADTVRLLVAG SLLSGVAFEE ISLRSGLSPR RAEAALASLL
SAGEVVQVVR EPRILLSRDA FGSLKSHLQG EVEGYLRDNP LKEGIGKEEL KTRLPKRSDP
RFFTPLLTSL EKEGKVVVER ELVKLPGRKG EPTVDQSGLQ GRIEAALLRG GFEPPTVKEL
CDQLRCGEKE LLEHLNILAR QGRAVKLKSD VFYPPGPVGE IREKLVARLR EKGEITPPEF
RELTGLSRKF MIPLLEFFDQ EKITIRVGDK RILRKG
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