| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_2086 |
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| Symbol | |
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| ID | 7285802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011883 |
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| Strand | + |
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| Start bp | 2511707 |
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| End bp | 2513680 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643582908 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_002480660 |
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| Protein GI | 220905348 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0347898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGTAG TGCTGGGCAC AGCCGGACAT ATCGACCACG GCAAAACCTC TCTGGTGCGC
GCGCTCACGG GCATCAACTG CGACCGGCTG GAAGAGGAAA AACGCCGCGG CATCACCATT
GAACTGGGCT TCGCCTGGGT GGACATGCCC GGTGGCGAAC GTCTGGGTAT TGTGGACGTG
CCGGGCCACG AACGGTTCGT AAAAAATATG GTTGCCGGGG CTGCCGGGGT GGACTTTGTA
ATGCTGGTCA TCGCGGCGGA CGAGGGCGTC ATGCCCCAGA CCCGAGAACA CCTTGAAATA
TGCTCTCTGC TCGGCATCCG GAACGGCTTT GTGGCCCTGA CCAAGACAGA CATGGTGGAC
GCCGACTGGC TTGAAATGGT CACCGAGGAT GTGCGTGGTT TTCTGGCCGG AACCTTTCTT
GAGGATGCGC CGGTTTTTCC TGTCTCGTCG GCAACGGGTG ACGGGGTAGA CGCGCTGCGC
ACCCATATTT TTCAACTGGC TGCCGACCTT CCCGCCCGGC GTCGTGTTGA TATCTTCCGC
CAGCCCGTGG ACCGCGTGTT CAGCATGAAA GGCTACGGCA CGGTTATCAC GGGCACGGTC
ATTTCCGGCA GCGTCAAGGT CGGTGATGAC CTCCGCTTCA TGCCGCCCGG CACTCCCACC
AGGGTGCGCG GCCTGCAGCG CCACGGAAAA AGCGTTGACG ACGTGCCGGC CGGGCAGCGC
TGCGCCACCA ACGTTCAGGG GCTGGAGGTC GGTGATATCG AGCGCGGCCA GGTGCTGGCC
CATCCCGATG AGCTTTTTCC GGCCCGGCGC TGGCTCATGC GCCTGACCTG CCTTTCCTCA
TCCCCGCGCG CCCTGCGCCA GCGGGTGGAG ATACATTTTC ACCACGGCAC AAAAGAATGC
GCGGCCCGCG TGGTTTTTTG GGACAGGGAC AAGCTGGCCC CCGGCGAAAC CGCACTGGCG
GAAATCCGCT TCAAGGACGA AATGGTGGGT GTTTTCGGCG ACCACTGCGT GCTGCGCGCC
TATTCTCCCC TGCGCACTGT GGCAGGCGGC CTGCTTTTAA GCCCCCTGCC GCCCGACCTG
CGCCGCAAGG ATCCGGACCT GCAAAACAAG CTGACCCTGC TGGAAAAACT GCCAGTTCTG
GACAGAGAGG CTGAATCCAC CCCTGCCAGC AAGGCCGGGG CAAAAGCACG AGACGAAGCC
CGGGCCGCCT TTATTGACAC GGTGCTGGCC CTGCGCGGGA CCACAGGCGC GGACGAAGCG
CGCCTGCGTG TGCTTACGGG CTTTCCGCGG GCAGTGCTCG AATCGGGCCT GCAACTGCTT
TCCACACGCG GCGCCGCTTT TTGCTGGGAC AAGGAAGGAC GCCTCTGGAT AGGCAGGCAG
GCGTTTGAAA GCCTGCAACA GGCCTGTCTT GAACGTGGGG CGGAACTGCA CCACAAAGAT
CCCCTCAAGC CGGGCTTCAC CCGGGGAGCA CTATGCTCGG GCTGGAGCAA GGGCCTGCCG
CAACGCCTTA TCCAGCGCGT GCTGGACACG GCGCTCAAGC AGGGGCATCT TGCTCTTGAA
GGCGAAGGAT TGCGGCTGGC CGAGCACAAG GTCAGTCTTG CGGCGGATCA GGCGGGCCTG
CGGCAGAAGC TGCTGGACGC CCACGCCGGA GCGGGCCTTG CCCCGCCCAA CGCCAAGGAC
GTACTGGAAG AACTGGGCGT CAGCGCCAAG GAGGCCGCCC CCGTGCTGCG CCTTCTCTGC
GAAGAAGGCG CGCTGGTCAA GATCAAGGAC GGCCTTTACT ATCACGGCCC GGCCCTGAAC
GATATCATGG AGCGTGTGCG CCGCTGGTTC GAGACCAACG ACAATCTGGA CGTGGGCGGC
CTTAAAGAAA TACTGGGGCT TTCGCGCAAG TATCTCATTG CCCTTCTGGA ATATATGGAC
AATGAACGTA TTACCGTGCG TGTGGGCGAC CAGCGCCGCT ACCGGGGGCG CTGA
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| Protein sequence | MAVVLGTAGH IDHGKTSLVR ALTGINCDRL EEEKRRGITI ELGFAWVDMP GGERLGIVDV
PGHERFVKNM VAGAAGVDFV MLVIAADEGV MPQTREHLEI CSLLGIRNGF VALTKTDMVD
ADWLEMVTED VRGFLAGTFL EDAPVFPVSS ATGDGVDALR THIFQLAADL PARRRVDIFR
QPVDRVFSMK GYGTVITGTV ISGSVKVGDD LRFMPPGTPT RVRGLQRHGK SVDDVPAGQR
CATNVQGLEV GDIERGQVLA HPDELFPARR WLMRLTCLSS SPRALRQRVE IHFHHGTKEC
AARVVFWDRD KLAPGETALA EIRFKDEMVG VFGDHCVLRA YSPLRTVAGG LLLSPLPPDL
RRKDPDLQNK LTLLEKLPVL DREAESTPAS KAGAKARDEA RAAFIDTVLA LRGTTGADEA
RLRVLTGFPR AVLESGLQLL STRGAAFCWD KEGRLWIGRQ AFESLQQACL ERGAELHHKD
PLKPGFTRGA LCSGWSKGLP QRLIQRVLDT ALKQGHLALE GEGLRLAEHK VSLAADQAGL
RQKLLDAHAG AGLAPPNAKD VLEELGVSAK EAAPVLRLLC EEGALVKIKD GLYYHGPALN
DIMERVRRWF ETNDNLDVGG LKEILGLSRK YLIALLEYMD NERITVRVGD QRRYRGR
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