| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4266 |
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| Symbol | |
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| ID | 7261290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 4514779 |
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| End bp | 4516683 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643564182 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_002460707 |
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| Protein GI | 219670272 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA TTGTCTTAGG AACCGCCGGG CATATTGACC ACGGCAAAAC ATCCTTAGTG
AGAAAACTGA CCGGTATTGA TACAGATCGC CTTGAGGAAG AGAAGCGGCG GGGGATGACC
ATTGAACTGG GTTTTGCCTC CCTGACTCTG CCCTCGGGTC AGATTGTATC CATCATTGAT
GTGCCCGGAC ATGAGAAATT CGTGAAGACT ATGGTGGCCG GTGTCACCGG TATCGATCTT
GTGATGTTGG TCATTGCCGC TGATGAAGGT ATTATGCCGC AAACCAGAGA GCATCTGGAT
ATTTTAAACC TGCTCAATGT TACAACCGGT GTCATCGCCC TGACCAAAAC GGATCTTGTG
GACGACGAGT GGCTGGAAAT GATCATTGAA GATATCCGGA ATGCACTGCA AGGGACAACT
TTGGCGGAGA GCCCCATTGT CCATGTATCT TCCGTGACCG GGGAAGGGAT TCCCCAACTG
AGGGAAACCT TGGATCAGCT TGCCCAAAAG GTCCAAGTCA AGGAAAGTCA AGAATTATTC
CGGCTGCCCA TCGACAGAGT CTTTTCTATG TCAGGGCATG GGACGGTAGT CACCGGCACG
ATAACCAGCG GAGTGGTTCA CAAAGGCGAT ACCCTGGCCA TCTATCCTTC CGGACTTAAT
GCACGGGTCA AGGGAATTCA GGTCCATAAT ATGAGTGTCG ACGAAGGGAC TGCCGGCGAT
CGGTGCGCCT TGAATCTCAC CGGAATCGAA AAATCTGAAA TCCAGCGGGG CGACACCATT
GCTCGTGAAG GAACCCTGAT TCCAATCCGG ATTGCGGATG TGCTGATTTA TATCGTCAAA
GGGAAAGGGA ATTTGGTACA CAATCAAAGA GTACATGTGC ACACCGGAAC GAAAGAGGTT
CTGGCCCGGG TCAGGCTTCT GGGTACTGAT GAGATCCCTG AGGGGGAGAA AGGTCACGCA
CAGCTGCGTT TTGAAGAACC CATCGTCATT CTGCGCAAAG ACCGATTTAT TATCCGCAGC
TACTCCCCTG CTGTGACCAT CGGCGGGGGC TGGGTTTTGT ATCATACCAC GAAAAACAGA
CAGCGGTTTT CCCCGGAAAG TATGAATGCT ATGAGCATCG GTGAGCATGG CACCAGGGAA
GAGCTAGTCA CCTTAATCTT AAATTCCTCG GAAAAACCCC TTAGTTCGGG TGACCTTTGG
CAGGCTTTGA ATACGGAGCG GGCTGAATTA CAGGAAACCC TGGATAAGGA AGTCGCTTCA
GGAAAGTTAA TTATCTTGAA GGAAACTCGT AAATACTTAA GCATCAACCA ATATGAAAAA
TATTTTAATA AAATACAATC CGCCTTCCGG AAAATGTATC AGAAATATCC CTACCGCTAC
CAGATGGATA AGGAAGAACT GAAAAGCGGG GCTTTTTCCG GGATGGAGCC GAAAGATTTT
GCAGCATTGC TGAATTATTT CCTTGCTAAT CAGCGTTTGC TTGCGGATGG AAACTACCTG
TCGGAACCTG ACGGTAAAGC CTTAGCCAGA ATTCTGGCAG CCAAGGAAAC AGCCCTGATT
GAAAAGGTGT TTTTAACTTA TGATCTCAAC ACAGGAAGTA TTCAGCAGGC CGCCAAAGAT
ACAGCTATGA AAACAGGGGA CGTTGAGGAA GTAGTGAAAT TCCTGCTCAA ATCAGGCAAC
CTGGTGGATC TGGGGCAGGG AATTCTCGTC CATAAAGAAG CTTTACAAAA AGTCTGCCAA
ATCGTCCGCT CGTTAATGGA CGCCCAAGGA ACCATCAGCG TGGCGGAAAT CAGGGATGCC
CTGAATATTG GCAGAAAGAC CGTCGTCGCT TATTTGGAAT ACCTCGATAA ACTGAAAATC
ACCCTAAGAA AAGAAGACGT TCGCATACCG GGAGCCCACT ACTAG
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| Protein sequence | MKKIVLGTAG HIDHGKTSLV RKLTGIDTDR LEEEKRRGMT IELGFASLTL PSGQIVSIID
VPGHEKFVKT MVAGVTGIDL VMLVIAADEG IMPQTREHLD ILNLLNVTTG VIALTKTDLV
DDEWLEMIIE DIRNALQGTT LAESPIVHVS SVTGEGIPQL RETLDQLAQK VQVKESQELF
RLPIDRVFSM SGHGTVVTGT ITSGVVHKGD TLAIYPSGLN ARVKGIQVHN MSVDEGTAGD
RCALNLTGIE KSEIQRGDTI AREGTLIPIR IADVLIYIVK GKGNLVHNQR VHVHTGTKEV
LARVRLLGTD EIPEGEKGHA QLRFEEPIVI LRKDRFIIRS YSPAVTIGGG WVLYHTTKNR
QRFSPESMNA MSIGEHGTRE ELVTLILNSS EKPLSSGDLW QALNTERAEL QETLDKEVAS
GKLIILKETR KYLSINQYEK YFNKIQSAFR KMYQKYPYRY QMDKEELKSG AFSGMEPKDF
AALLNYFLAN QRLLADGNYL SEPDGKALAR ILAAKETALI EKVFLTYDLN TGSIQQAAKD
TAMKTGDVEE VVKFLLKSGN LVDLGQGILV HKEALQKVCQ IVRSLMDAQG TISVAEIRDA
LNIGRKTVVA YLEYLDKLKI TLRKEDVRIP GAHY
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