| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0164 |
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| Symbol | |
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| ID | 5165432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 225746 |
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| End bp | 227656 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640547663 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_001228953 |
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| Protein GI | 148262247 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATC TCATTCTCGG CACCGCCGGA CATATCGACC ATGGCAAGAC ATCGCTGGTC
AAGGCCCTCA CCGGCATCGA CACCGACCGG CTCAAGGAGG AGAAGGCGCG CGGCATCACC
ATCGAGCTCG GCTTCGCCCA TCTGGAACTG CCTGGTGGCA TCCGGTTCGG CATCGTCGAT
GTGCCGGGGC ATGAGCGCTT TGTTCGGGCC ATGGTGGCCG GTGTCGGCGG CATGGACCTG
GTGATGCTGG TCATTGCCGC TGACGAGGGG GTCATGCCCC AGACCCGCGA GCACCTGGAG
ATTTGTCAGC TCTTGGGCGT CAAGAAGGGA CTGGTGGCGC TGACCAAGAG CGATCTGGTG
GACGGCGACT GGCTTGGGCT GGTTGGGGAA GAGGTGCGAG ATTACCTCTC TGGCAGCTTT
CTTGCGGAGG CGCCGATTAT TCCGGTGTCG TCGCGGACCG GTGCCGGACT GGTGGAGTTG
AAGCAAGAGC TGGCGCGGCT GGCAGCGGAA GTGGAGGAGA AGCGGCACGA CGGACCCTTC
CGGCTCCCGG TGGACCGGGT CTTCACCGTC ACAGGCTTCG GCACGGTTGT CACCGGCACC
CTCCTCTCCG GTGAGATCAA CGTCGGCGAC GAGGTGGAAC TCCTTCCGGC AGGACTTTCA
TGCAGGGTAC GGGGCATCCA GGCCCACGGC GCAAAAACCG ACAAGGGGCT GGCCGGCCAG
CGTCTGGCCG TCAACCTCCA GGGGGTAGAG CATACCGAGG TGGAACGGGG CGACGTTGTG
GTTCCCAAGG GGCTTTATCG TCCGACCCGC GCCGTGGATG TGCGCCTCAA CTACCTTAGC
TCGGCGCCCC GGGAGCTGAA GCACCGTGCC ACACTCCGTC TCCACTCCGC TACCTACGAG
GTGCCGGCGC AGGTGATCCT CCTCGACCGC AACACCCTTC AGCCTGGCGA GACGGCCTAT
GCGCAGCTCC GTCTGGCCAA GCCCGTGCTG CTCCTCCCGG GCGACCCGTT CGTGCTTCGC
ACCTATTCGC CCCAGGCCAC CCTTGGCGGC GGAGCAGTCC TCGATCCCGA CCCGCCCAGA
CGGCGCAGGC GCTCGACCGA CGCGTTGGCG CTGCTCCAGG CAATCGAGGC GGGAAGCGAG
ACGGAAAAGA TCCGGCTCCT CGTTGCCGCC AGCCTCCTTT CCGCCCTTTC CCTCGACGAG
ATGGTCAGCC GCACCGGAAT GTCGGCGAAA AGGATCGATG CGGTCCTGGC AGCACTCCTT
TCATCGGGGG AGGTGCTCCA GGTGGTACGC GAGCCGCGCA TGTTCATCGG CAAGGTGGCG
TTCGATACCC TTAAGGCAAA GCTGATGGAA GAGCTGCAAA GCTTTCTCCG CGACAACCCG
ATGAAAGACG GCATCAGCAA GGAAGAGCTC AAGTCGCGTA TCCCCAAGCG GAGCGATCCC
CGCTTCTTCG GACCGCTCCT GGCCGCCCTG GAAAAAGAGG GGAAGGCCGT CTCCGATCGG
GACATCGTAA AGCTGCCGGG GCGCAAGGGT GAGGCGACCG CCGGTCAGGC GGGGGTCCAG
GCAAAAATCG AGGCGGCCCT GCAACGAGGG GGGATGGAGC CGCCGACCAT CAAGGAGCTG
TGCGACTGGT TCAAATGCAC GGAGAAGCAG GCGCTGGAGC ACCTCAACTT CCTCTTCCGC
GAGGGGCGGG CGGCCAAGAT CAAGGGGGAT GTGTTTTACG CGCCACAGCC CCTGTCGGAG
ATCCGGGAGA AACTGATCGG CCACCTCAAG GCCAAGGGAG AGATCACTCC GTCCGAGTTC
CGGGAGCTGA CCGCGCTTTC CCGCAAGTTC ATGATCCCGC TTCTGGAATA TTTCGACCAG
GAAAAGGTGA CCATCCGCGT TGGGGATAAG CGGGTGCTGC GCAAGGGGTG A
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| Protein sequence | MKHLILGTAG HIDHGKTSLV KALTGIDTDR LKEEKARGIT IELGFAHLEL PGGIRFGIVD
VPGHERFVRA MVAGVGGMDL VMLVIAADEG VMPQTREHLE ICQLLGVKKG LVALTKSDLV
DGDWLGLVGE EVRDYLSGSF LAEAPIIPVS SRTGAGLVEL KQELARLAAE VEEKRHDGPF
RLPVDRVFTV TGFGTVVTGT LLSGEINVGD EVELLPAGLS CRVRGIQAHG AKTDKGLAGQ
RLAVNLQGVE HTEVERGDVV VPKGLYRPTR AVDVRLNYLS SAPRELKHRA TLRLHSATYE
VPAQVILLDR NTLQPGETAY AQLRLAKPVL LLPGDPFVLR TYSPQATLGG GAVLDPDPPR
RRRRSTDALA LLQAIEAGSE TEKIRLLVAA SLLSALSLDE MVSRTGMSAK RIDAVLAALL
SSGEVLQVVR EPRMFIGKVA FDTLKAKLME ELQSFLRDNP MKDGISKEEL KSRIPKRSDP
RFFGPLLAAL EKEGKAVSDR DIVKLPGRKG EATAGQAGVQ AKIEAALQRG GMEPPTIKEL
CDWFKCTEKQ ALEHLNFLFR EGRAAKIKGD VFYAPQPLSE IREKLIGHLK AKGEITPSEF
RELTALSRKF MIPLLEYFDQ EKVTIRVGDK RVLRKG
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