| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1647 |
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| Symbol | |
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| ID | 8428613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 1727271 |
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| End bp | 1729205 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 645033980 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_003191127 |
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| Protein GI | 258514905 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00236334 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000010303 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAGCACC TTATTATCGG CACGGCCGGC CACGTGGACC ATGGCAAGAC AATGCTGGTC
AAGGCACTGA CCGGGATTGA TACGGACAGG CTGAAAGAAG AAAAAGAAAG AGGCATCTCC
ATTGAACTCG GCTTTGCCTC TCTGACTTTA CCCGGTGGGC GCCACGCTGC CATTGTTGAT
GTGCCGGGGC ATGAGAGATT TATTAAAACC ATGCTGGCAG GTGCCAGTGG CATAGATATT
GTACTGTTAA TAATTGCCGC TGACGAAGGA GTAATGCCGC AAACCCGGGA ACACCTGGAC
ATTATTCGCC TCCTGCATAT CAACCAAGGC ATAGTTGTTA TCACCAAGAC AGATTTGGTT
GAAGAAGACT GGTTGGAACT TGTCCAGGAA GAGATTAAGG ATTTTATAAG TGACACTGTG
TTAAAGGATG TACCAATAGT TAAAGTGTCG GCTGCTACCG GATATAATAT TCAGGAATTA
CTGGAGCAAA TTAATATTTT GGCTGAAGTA GCTAAAGAAA AGTCAACTGC CGGTCAGCCA
AGGTTACCCA TCGATCGGAT ATTTTCCATA ACAGGTTTTG GTACAGTTGT TACCGGAACA
ATGGTTTCAG GCCAACTGAA AGTTGGCGAC GAGATTGAAG TATTTCCGGA AGAATTAAAA
GCCAGAGTGA GGTCCCTGCA GGTGCACGGT AAAAGTGTGG ATTTGGCCAG GGCGGGCCAG
AGGGTGGCGG TTAATTTAAG TGGTCTGGAA GTTGAGCAAA TCAGTCGGGG CAATGTTCTG
GCCCTGTCCG AAACCCTTAC AGCCTCCTTC CGGTTAGATG TGCGATTTAT GTTACTAAAG
GACGCAGGCA AAGAACTGAA ACACAGGTCG AGGATTAGAT TATATACCGG TACTATTGAA
GTACTTGGCC GGATTATCTA CTTTGACCGT GAAGAATTAA AACCAGGTGA ATGGGCTTAT
GGACAAATAC AGTTGGAAGA AGCTGTAGCC ACAGCCAAGG GCGACCGCTT TGTAGTCAGA
TCCTATTCGC CCATGCATAC TATAGGCGGT GGAACGATTA TAGATGCAAC GGCATCCAAA
CACAAGCGCT ACCGTCAAGA AATAATCGAC AGGATGGTGA TTCTGGAGAG AGGCACTCCA
GATGAAATAA TTGAACAGTA TCTGGCCGGA ATATTTATTC CTGCGCATAT AAATGAATTA
GTCAAAGCTA CGGGTTTGAG TGAAATACAG GTTAAAGAAG CACTTACGGA GTTAAAGAAT
AAACAAAGAG TAAAATTTAT CGATGAAAAA AGCGGTTATG TTGTCTCTGT TTATAGATAT
CAAAGCTGGA CTCTAGATAT ACAAAAACTA TTGAGCCAGT TTCACCGTGA ATTTCCATTA
AGGGAAGGCT ACCCGAAAGA AGAGCTGCGT TCCCGCAAGT TCAAAAATCT AAATCCCAAA
ATATTTCAAC TAATATTAAC TGAGTTAAAA AATGATCAGA TTATTAAAAT ACAGCCGCAA
ACCGTTGCTA CTTTTGCTTA TGAAATACAG CCTGATGCTG AGCAGCAAAA AATGTTGGAA
CTGATTGAAA AGACCTTCAT TCAGGCACAA TTTCAACCAC CCGGTTGGGA GCAACTGGCC
ACAGAACTCA AAATTATAAA TGAATTGAAG CAGGAGTTAC TCCAGTATTT ATTGCGTCAG
GGCAGCCTGA TTAAAATAGC TGATGATATG TATTTTCATC GAGATATTTT GAATAAGGGC
AGGCAGATGT TGTCAGATTA CTTCAAAAAT AAAGAGGAAA TATCTATCGG TGAAATAAGG
GATTTGTTGA CTACATCCAG AAAATATGCC ATGCCCTTGC TCGAATATTT TGATCGCCAT
AGGTTTACCA GACGAATCGG GGACCTGCGG GTTATAGGGA AAGAGCTTGA TTCAGGAATA
AAACCTGAAA ATTAA
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| Protein sequence | MKHLIIGTAG HVDHGKTMLV KALTGIDTDR LKEEKERGIS IELGFASLTL PGGRHAAIVD
VPGHERFIKT MLAGASGIDI VLLIIAADEG VMPQTREHLD IIRLLHINQG IVVITKTDLV
EEDWLELVQE EIKDFISDTV LKDVPIVKVS AATGYNIQEL LEQINILAEV AKEKSTAGQP
RLPIDRIFSI TGFGTVVTGT MVSGQLKVGD EIEVFPEELK ARVRSLQVHG KSVDLARAGQ
RVAVNLSGLE VEQISRGNVL ALSETLTASF RLDVRFMLLK DAGKELKHRS RIRLYTGTIE
VLGRIIYFDR EELKPGEWAY GQIQLEEAVA TAKGDRFVVR SYSPMHTIGG GTIIDATASK
HKRYRQEIID RMVILERGTP DEIIEQYLAG IFIPAHINEL VKATGLSEIQ VKEALTELKN
KQRVKFIDEK SGYVVSVYRY QSWTLDIQKL LSQFHREFPL REGYPKEELR SRKFKNLNPK
IFQLILTELK NDQIIKIQPQ TVATFAYEIQ PDAEQQKMLE LIEKTFIQAQ FQPPGWEQLA
TELKIINELK QELLQYLLRQ GSLIKIADDM YFHRDILNKG RQMLSDYFKN KEEISIGEIR
DLLTTSRKYA MPLLEYFDRH RFTRRIGDLR VIGKELDSGI KPEN
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