| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1982 |
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| Symbol | |
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| ID | 4115735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2002739 |
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| End bp | 2004577 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 638036769 |
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| Product | selenocysteine-specific translation elongation factor SelB |
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| Protein accession | YP_644741 |
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| Protein GI | 108804804 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.869997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGTGAGC GTCCGGTAGC GCTCACCATA GGCACCGCCG GGCACGTGGA CCACGGCAAG
ACCACGCTGG TCCGCCGGCT GACCGGCACG GACACCGACC GCCTGGAGGA GGAGCACCGG
CGGGGCATCT CGATCGTGCC GGGCTACGCG GAGCTGGTCT TGCCGGGGGG GCGTCGGGCG
AGCCTGGTGG ACGTGCCCGG CCATGAGCGG TTCGTGAAGA ACATGGTGGC GGGCTCCACG
GGGGTCGACG CCTTCCTGCT GGTCATAGCC GCCGACGACG GGGTGATGCC CCAGACCCGC
GAGCACCTGG ACGTGCTGCG GGTGCTGGGG GTGGAGCGGG GCGTGGTGGC CCTCACGAAG
ATCGACGCGG TGGACGCCGA GACGGCCGAG CTGGCCCGGC TGGAGGCGGA GGAGTTTCTG
GAGGAGTCGG GGGTCCGGGC CCCGATAGTG CCGGTGAGCG GGGTGACGGG GGAGGGGGTG
GACGAGCTGC TCGCGGCGCT GGACGAGCTG GCGGGGTCTC CGGCCGCCCG CCCTGCGTCG
GGGCTCGCCC GCCTGCCGGT GGACCGGGCG TTCGTGCTGA AGGGAATCGG GCTGGTGGTC
ACGGGCACGC TGTGGAGCGG GAGTATCCGG GTGGGGGACA CCCTGTACAC CTCCTCGGGC
CTCCGGCCGC GGGTCCGCGG GATCCAGAAC CACGGGCGCC CGGCGGAGGT GGCCTACCCG
GGGGCGCGGA CGGCGCTGGA CCTGGCGGGG GTGGAGGCGC AGGAGATCGA ACCGGGAGAG
GTGTTGCTCT CCCGCCCGGT CCCGGCGACC GGGCTGTTCG ACGCCCGGGT GCGGCTGCTC
GAGTCGGCCC GTCCCCTGCG ACACGGCACC CGGGTGCGGC TGCACCACGG CACCCGCTCG
GTGAACGCAC GGGTGCGGCT GCTCGGCGGG GGGGAGCTGG AGCCCGGGAG CGACGCCCTG
GCCCGGGTGC GGCTGGAGGA GCCGCTGGTG GCGCTCCCGA AGGACCGGTT CGTGCTGCGC
TCGCTGACCC CGCAGGTCAC GATCGGCGGC GGGACGGTGC TGGATATCGC CCCCTCCGGC
CGCCGCCCGG ACCGCGAGTG GCTGGAGACG CTGGAGTCGG GGGATCTGGG CCGGATCGTG
CCGCGGGCGC TGGCCCGGGC TGGCGGCGGG ATGGCCGCGG AGGATTTGGC GCTGGTGCTG
GGGAGGGAGC CGGGGGAGGT GGCGGAGGCC GCCGGGCGGG CGCCGGAGGT GGTGCGGGCC
GGCCCGGTGT ACGCTCTGCG CGGCGCGGTG GAGGAGGCGA AGGGGCGTTT GCTCGAGGCC
CTGCGCCGCC GCGCCCGGGA GCACCCGGAG AGCCCGGAGC TCTCCGTGGC CGAGGCGCGC
CAGGCGACGG GCCTGCCCGA CGCCCTGGCC GACGCCCTCC TGGAGGAGCT CTCGGGCGGG
GTGGTGCGGG TCTCCGGGCA GGGCGTCCTG CTGCCGGAGG CCGCCGGGGT CCCGCCGGAG
CTGGAGGCGG AGGCCCGTCG CATCCTCGAG AGACTCCGCG CGGCGGGGCA CGAGCCGCCC
GCCCTGGAGC CCGGCCCCGC CCTGGCCCTC CTCCTCCGGC GCGGCGAGGT GGTGAGGCTC
TCCGAGAAGA TGTACGCCGC GGGCGAGGCG GCCGCGAGCG TCATGGACGA GATAAAGGCC
GTCTGCAGGG AGGAGGGGGA GATCTCGCTC GCCCGCCTGC GCGACCGCCT GGGGACCAGC
CGGAAGTACG CCCAGGCCTG GCTGGAGTAC GCCGACGCCC AGAAGATCAC CGTCCGCACC
GGCGACGTGC GGGTCCTCAC CCGCAAGCAT CGCCGGTAG
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| Protein sequence | MGERPVALTI GTAGHVDHGK TTLVRRLTGT DTDRLEEEHR RGISIVPGYA ELVLPGGRRA
SLVDVPGHER FVKNMVAGST GVDAFLLVIA ADDGVMPQTR EHLDVLRVLG VERGVVALTK
IDAVDAETAE LARLEAEEFL EESGVRAPIV PVSGVTGEGV DELLAALDEL AGSPAARPAS
GLARLPVDRA FVLKGIGLVV TGTLWSGSIR VGDTLYTSSG LRPRVRGIQN HGRPAEVAYP
GARTALDLAG VEAQEIEPGE VLLSRPVPAT GLFDARVRLL ESARPLRHGT RVRLHHGTRS
VNARVRLLGG GELEPGSDAL ARVRLEEPLV ALPKDRFVLR SLTPQVTIGG GTVLDIAPSG
RRPDREWLET LESGDLGRIV PRALARAGGG MAAEDLALVL GREPGEVAEA AGRAPEVVRA
GPVYALRGAV EEAKGRLLEA LRRRAREHPE SPELSVAEAR QATGLPDALA DALLEELSGG
VVRVSGQGVL LPEAAGVPPE LEAEARRILE RLRAAGHEPP ALEPGPALAL LLRRGEVVRL
SEKMYAAGEA AASVMDEIKA VCREEGEISL ARLRDRLGTS RKYAQAWLEY ADAQKITVRT
GDVRVLTRKH RR
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