| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2185 |
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| Symbol | |
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| ID | 4958148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2386857 |
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| End bp | 2388764 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640181361 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_001113525 |
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| Protein GI | 134300029 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.573253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATA TTATCATTGG AACCGCAGGG CACGTGGACC ATGGTAAAAC CTTGCTTATT
AAAACATTAA CAGGAATGGA TACTGACCGT TTAAAAGAAG AGAAGGAAAG AGGTATTTCC
ATTGAGCTTG GCTTTGCCCA GCTTAAACTG CCCAGTGGTA AACAAGCAGG TATTGTGGAT
GTCCCGGGTC ACGAAAAATT TATTAAGAAC ATGTTGGCAG GGGTCGGCGG AATTGACTTG
GTATTGTTGG TAATTGCTGC GGACGAAGGC GTGATGCCCC AAACCAAAGA ACATGTTGAT
ATTATTCAAT TGCTTCAAGT TAAGAAAGGG ATAGTGGTCT TAACCAAAAT AGATATGGTG
GACGAGGAAT GGCTTAGCTT GGTAACGGAA GAAATTAGGG AGTATTTAAA AGATACTGTT
CTTAGTGAGG CACCTGTTGT ACCTGTATCA TCTACAACTA AGCAGGGGAT TCCGCAACTA
TTGGATTTAA TTGATCAATT TGTGGATGAC ACGGAAGAAA GAAACAGCAG TGGTAAGTTA
AGGTTACCCA TAGACAGGGT GTTCTCAGTA ACTGGTTTTG GGACGGTAGT AACTGGTACT
TTGCTATCTG GCCGGGTTTC CACGGGAGAT ACCGTAGAAA TCATGCCCCT TGGCACGGTT
TCTAGAGTTC GCTCCATACA AGTCCATGGT AAAAAAGTAG AGCAGGCTCG GGCAGGTCAA
CGGACGGCAG TAAACATCAT CGGAGTGGAG GTGGAGGAGG TTAAGCGTGG TAGTGTTTTG
GTAACGCCTA ACAGCGTAGA ACCTTCACAC CGTATGGATG TTAAATTTCT ATTATTGGAA
AGCGCGGAAA AACCGCTTAA AAATCGGGCT AGGGTTCGGT TGTATTTGGG AACTGATGAG
ATTTTAGGTA GGGTGAGACT TCTGGACCGA GAAGAAATAG AACCAAACCA GGAAGCCTAT
GTTCAGCTGG AATTGGAAGA GAGGGGAATT GCCGGTAAAG GGGATCGTTT TGTTATCCGA
TCCTATTCTC CTATGAGGAC CATTGGTGGC GGTGTTGTCA TTGAACCCAA TGCACCCAAG
CATAAACGCT ATCGATCAGA GGTGTTGGAA GGACTGGCCA CCAAAGAGAA GGGGACCCCA
GAGGAATTAG TAAACCAACT TCTAGCTGGA AAGCAGGGCC TGTTTAGTCC GGAAGAAATT
ATTGAAGCAA CTGGTCTTGC CGGGGACGAT CTAAAAATTA GTATAGAGAA GTTACAGTCT
GAACAACAGG TAAAATGCAT ACCAGTCGAC AAAAAGAGTC TCTATATAGC ACAATTTACT
TATAACAAAT GGCGTCAGGA AATTAAGAGT ATGGTAATCA ACTATCATCG GGAATACCCC
TTAAGAGAAG GGTACCCGAA GGAAGAACTG CGCTCCAGGA AATTCCCCTT TATCAATAAC
AAACACTTTC AGTATTTGCT CCAGGCAATG GAAATAGATG GTTTATTGAA GCTTCATGAT
AAAACCCTTG CCTTAGCAGA ATTTACTGGT GAGTTATCCG GCAGCCAGCA GAAGTTGGTA
CAGGATATGA TATGTGCCAT ACAAGAAGGC AATTTTCAGC CGCCGTCCTG GGTGGAAGTT
GTGAAAAAGT TCCGTCTGAA GGATGCTGAG TCCCAAGAGT ATCTGCAGTA TTTTCTCCGT
ACGGGCCAAT TAGTTAAGCT AAGCGATGAT GAACTGTATT ATACAGCAGA TCGATATCAG
CAGGCCAAAA CGAAAATTGT TGAATACCTT AAAGAAAACA AAGAAATCTC AGTGGCTCAG
ACTCGTGATT TGTTAAAAAC CTCCCGAAAG TTCACTCTAC CTTTGCTGGA AACCATGGAT
CGTGAGAGGC TGACCCGCCG AGTGGGAGAT AATAGGGTAC TGGTCTAG
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| Protein sequence | MKHIIIGTAG HVDHGKTLLI KTLTGMDTDR LKEEKERGIS IELGFAQLKL PSGKQAGIVD
VPGHEKFIKN MLAGVGGIDL VLLVIAADEG VMPQTKEHVD IIQLLQVKKG IVVLTKIDMV
DEEWLSLVTE EIREYLKDTV LSEAPVVPVS STTKQGIPQL LDLIDQFVDD TEERNSSGKL
RLPIDRVFSV TGFGTVVTGT LLSGRVSTGD TVEIMPLGTV SRVRSIQVHG KKVEQARAGQ
RTAVNIIGVE VEEVKRGSVL VTPNSVEPSH RMDVKFLLLE SAEKPLKNRA RVRLYLGTDE
ILGRVRLLDR EEIEPNQEAY VQLELEERGI AGKGDRFVIR SYSPMRTIGG GVVIEPNAPK
HKRYRSEVLE GLATKEKGTP EELVNQLLAG KQGLFSPEEI IEATGLAGDD LKISIEKLQS
EQQVKCIPVD KKSLYIAQFT YNKWRQEIKS MVINYHREYP LREGYPKEEL RSRKFPFINN
KHFQYLLQAM EIDGLLKLHD KTLALAEFTG ELSGSQQKLV QDMICAIQEG NFQPPSWVEV
VKKFRLKDAE SQEYLQYFLR TGQLVKLSDD ELYYTADRYQ QAKTKIVEYL KENKEISVAQ
TRDLLKTSRK FTLPLLETMD RERLTRRVGD NRVLV
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