| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_0110 |
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| Symbol | |
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| ID | 5751806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009997 |
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| Strand | + |
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| Start bp | 131858 |
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| End bp | 133903 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641286355 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_001552552 |
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| Protein GI | 160873236 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCATTG TTACTGCGGG TCATGTCGAT CACGGCAAGA GTACGCTTAT TCGCGCCTTG
ACTGGGATGA ATACCGATCG TCTGCCGGAG GAGAAGCGCC GCGGTATGAC GATCGATCTC
GGCTATGCGT TTATGCCGCT TAGGGATGGT TCGCGCCTCG CTTTTATTGA TGTGCCTGGG
CATGAAAAAT TTATCAACAA CATGCTGGTG GGCGTGAGTC ATGCTCGCCA TGCCTTACTC
GTGCTGGCCT GTGATGATGG CGTTATGCCG CAAACCCGCG AACATCTGCA AATCCTAGCG
CTCTTACCGC TTCACAGTTT GACCTTAGTG CTGACTAAGC GGGATCTGGT TGATAGTGAT
ATGGCTGAGC AGCTTGTCGC CGATGGACTC ACTTTGCTGG CCGAGTATGG CATTGAGGCC
AGTGGTTTTT TTCAGGTGTC GGCAAGTGAA ACTGCCGACT TAGCATCCAA TGGTGTGGCC
GCACTTAAGG CGCATATTCT TGATTTAGCT GAGCAGGAGT CTAAGCGGGC TGAGGATGCC
AGCAGTTTTA GGATGACGCT CGATCGCGCC TTTAGTGTGA AGGGTGCAGG TTGTGTGGTT
ACGGGCACAG TGATCAGCGG CAATGTGTGC GTGGGTGATA GTCTTTTTAG CTCAGGACAA
AAGGCCAAGT TGAGAGTACG AGGCATCCAT TGTCAAGGAC AAGAAGCCCA AAGGGCCGTC
ACGGGGACAC GTGTAGCACT CAATTTAACC GGAGTTGATA ACCATAGGTC GCCCGAACGC
GGCGATTGGC TAAGCAGCTT GCCTCAAGCT GAGCACTGTA GCCGCCCTGT GGTGCATATT
CGAGTCTTCG ATTTATTAGG TATTGAGCCC TTGGTACATT GGCAAAATGT TCACTGTCAC
CATGGCGCTG ATCATACTTT AGGGCGAGTT TCGCTGTTAA ATGAAGCTGA TGCTGAAGGT
TTTTATCTGG CGGAGTTGGT ACTCGAAAAG CCGCTACTTT TATGCCAAGA CGATCCCATC
GTCCTGCGCC ACATTGGCGG TAAACAGACT TTAGGTGCAG GGCGAGTGTT GGCGCTTAAA
GTCCCTAATC GAAAGAAGCG CACGCCTGAA CGAGTCGAGA GATTACAGCA AGTAGCGCGC
TTGGATAATC CTGCCCATGT GGTGGCTTTA CTCGGCCAAA CTCAGGCGCT AGAACTTGCT
GAAATTGCGT GGCGTTGGCA ATTAACCGAC GAAGGGCTCG CTATGCTCTT AGCCCAAGCG
GGTTTAGTCC GTCTTGGCGA GTTTGCCGTG GCCACACGTT TACTTGAGCA AGAAAAACAA
CAGTTTATTA CTTTACTGAG CGAGTTCCAT CAACAACATC CCGACCAACT TGGGCTTGGG
CGTAATCGTC TGCAACGTAT GAGCCACAGC ATATTACCCA ACGAGCTTGC CAATAAGGTG
CTCGATAGCC TCTGCCAAGA TGGGCAGATG GTGCTGCGCG GTGCCTTGCT GCAGTTGGCG
GACCACAGAA TTGTCCTCGA TAGCGAGGCG CAGCAGTGCT GGCAACGCTT GGCTCCTTGG
TTGGCGCAGC AAACGTCCCC TGTGTGGGTG ACTGAGATGG GGGAATATCT CGAACTCGAG
CCCGCCAAAC TCAGATTGCT GTGCTTTCAA CTGGTGCAAC AGGGCTTTAT TACCGCTGTG
GTGAAGGACA GATATCTGCT GAGTGAGCAG TTGTGCCACT ACGCCAATCT GGTGCGTGAG
CATGTGGACA CCCACGGCAA GCTCGAAACT GCTGAATTTA AAGACTTAAT AGGGCTTGGT
CGCAAGGTCA GCATTCAGCT GCTTGAGTTT TTTGACAGAA GTGGTTTTAC CCGTAGGAAA
TATCGCAGTA ATAGCCGGGA AATTCGCGAC GCGGAGCTTT TTTTCTCCCA TGAGAATTGG
CGGAAGAACA TAGGAGTCGA ACCTACCCAG GACTGCTGGC AGCCCTACCC GGATTTGAAA
TCCGGACGCC TCACCGGAGA CGACGTTCTT CCAATAGAAG ACTTAGGGAT AGTAGAAAAT
GCTTAA
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| Protein sequence | MIIVTAGHVD HGKSTLIRAL TGMNTDRLPE EKRRGMTIDL GYAFMPLRDG SRLAFIDVPG
HEKFINNMLV GVSHARHALL VLACDDGVMP QTREHLQILA LLPLHSLTLV LTKRDLVDSD
MAEQLVADGL TLLAEYGIEA SGFFQVSASE TADLASNGVA ALKAHILDLA EQESKRAEDA
SSFRMTLDRA FSVKGAGCVV TGTVISGNVC VGDSLFSSGQ KAKLRVRGIH CQGQEAQRAV
TGTRVALNLT GVDNHRSPER GDWLSSLPQA EHCSRPVVHI RVFDLLGIEP LVHWQNVHCH
HGADHTLGRV SLLNEADAEG FYLAELVLEK PLLLCQDDPI VLRHIGGKQT LGAGRVLALK
VPNRKKRTPE RVERLQQVAR LDNPAHVVAL LGQTQALELA EIAWRWQLTD EGLAMLLAQA
GLVRLGEFAV ATRLLEQEKQ QFITLLSEFH QQHPDQLGLG RNRLQRMSHS ILPNELANKV
LDSLCQDGQM VLRGALLQLA DHRIVLDSEA QQCWQRLAPW LAQQTSPVWV TEMGEYLELE
PAKLRLLCFQ LVQQGFITAV VKDRYLLSEQ LCHYANLVRE HVDTHGKLET AEFKDLIGLG
RKVSIQLLEF FDRSGFTRRK YRSNSREIRD AELFFSHENW RKNIGVEPTQ DCWQPYPDLK
SGRLTGDDVL PIEDLGIVEN A
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