Gene CJJ81176_1381 details

Gene Information

• Locus tag: CJJ81176_1381
• Symbol: selB
• ID: 4683324
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter jejuni subsp. jejuni 81-176
• Kingdom: Bacteria
• Replicon accession: NC_008787
• Strand: +
• Start bp: 1305352
• End bp: 1307157
• Gene Length: 1806 bp
• Protein Length: 601 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 639854107
• Product: selenocysteine-specific elongation factor
• Protein accession: YP_001001037
• Protein GI: 121612252
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG3276] Selenocysteine-specific translation elongation factor
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00475] selenocysteine-specific elongation factor SelB; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.390422
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCTG TTATTATAGG AACCGCAGGA CATATTGATC ATGGAAAAAC TTCACTCATT 
AAAGCTTTAA ATGGTTTTGA AGGCGATAGT TTAAAAGAAG AACAAGAAAG ACAAATCACC 
ATTAATTTAA GTTTTTCAAA TCTTAAATTA AAAGATAAAA ACATTTCTTT TATCGATGTT 
CCAGGACATA AAGATTTGGT TAAAACTATG GTAAGTGGAG CTTTTGGCTT TAGTGTTTGT 
TTATTTGTCG TAGATATTAA CGAAGGTTTA AAAGAACAAA GTTTAGAACA TTTAGAAATT 
TTAAAAATTC TTGATATTAA AAATATCATT TTAGTGCTTA GCAAATGTGA TCTTTGTGAA 
AATATAGAGC AAAAAAGTGT AGAAATTTTA GAAGAGTTAA AAAATTTAGA TTATCCCATT 
TTAAAAGTAT TTCACACCAG TATAAAAAAT AATCAAGGCA TAGAAGAATT AAAAAATTAT 
CTTTATACCA TAGAAAACAA AGAAAACGAT GAAGAACTGA TTTTTCATTA TTATATCGAT 
AGAGTTTTTT CTCTAAAAGG CATAGGAACT GTCGTTACAG GCAGTCTTAA TGAAGGAAGC 
ATCACTTTAA ATGAAAAAAT CATCTGTTTA GACACTCAAA AAGAACTCAT TGTTAAAAAT 
ATACAAAACC ACGATACTAA TTTAGAGCAA ATCAAAGCTT GTAACCGTGT GGCTTTAAGT 
TTAAATTGTG ATTATAAAGA GTTGAAAAAA GGTTATTTGC TAAGTAAAAA AGGTTGTTTT 
AAAGCCTTTA AAGAATGCGA TGCTTTAGTT AAAGCAAAAA ATTTACAAAA TAGCAAAATG 
ATTTTTTGTG TAGGTTCAAG ACAAATAGAA TGCAAAATAA ATATATTAAA AAAACTAGAA 
AATGATGAAT TTTTTGTGCA TTTTAGTTTT GATAAAAATG TATTTTTAAG TTTTGATGAG 
GCTTTTATTT TATTACAAAA TAATCGTGTT ATAGGCGGTG GTAAGGTTTT AAATCCTTTA 
AGCGAACCTT TAAAAAAAGA ACAAAAAAAT AAATTTTTAA TGTTTTTGAA AAATAAAGAT 
TTTAAAGCAG CTTTTTCTTT CTTAAAAGAC GCACATAAAT ACGGCTTTGG TTTGCTTTCA 
AGCTATCAGA GATTTAAACT CTCTCATCAA AAAGCATTGA AATTAGCGAA AGAATTAAAT 
CAAGTATTTG TCGATGAAAA AAATCTTAAT GTATATCATT TACAAAGTCT AGAAGAAATT 
AAAAATTTCA TCAAATTCAT ACTTGAAAAA AATCCTTATG CCATGCTTTC AGCACATTCT 
TTAGCTTTAA GGATTACTTG GGCAAGTGAA AATTTTTGCG AACTCGGACT TAAAGAAATG 
TCAAATTTAT TGGATTTTCA AAATGGAATT TATTTTAAAA AAGGCATAGA TTTTGAAAAA 
CTTCAAGAAA AAAATAATAA CCAAATGTAT GAAATTTTAA AAAAACAAGG TATTAAACCC 
GAAGCTCCTT ATAATCTTTA TGATTTTTTA GAACTTGATA GAAAAAGCGG AGATAATATA 
CTCAAAAAAC TTACCCAAAA AGGCTTGGTT GTAAGACTTT CACACAATCT TTTTATAGAA 
AAACAAGCTC TTGAAAAACT TATGCAAGAA TGTTTAAATT TATTAAAAAA TCAAAGTCTT 
GATGTGCAAA GTATGAAAGA ATATTTCAAT CTTTCAAGAA AATATGCTAT TGCTTATTTA 
GAATACTTAG ACAAATTTCC TCAAGTAAGC AAAGAAGCTG AAAAAAGATT TTTAACAAAT 
ATTTAG 

 

Protein sequence

MKSVIIGTAG HIDHGKTSLI KALNGFEGDS LKEEQERQIT INLSFSNLKL KDKNISFIDV 
PGHKDLVKTM VSGAFGFSVC LFVVDINEGL KEQSLEHLEI LKILDIKNII LVLSKCDLCE 
NIEQKSVEIL EELKNLDYPI LKVFHTSIKN NQGIEELKNY LYTIENKEND EELIFHYYID 
RVFSLKGIGT VVTGSLNEGS ITLNEKIICL DTQKELIVKN IQNHDTNLEQ IKACNRVALS 
LNCDYKELKK GYLLSKKGCF KAFKECDALV KAKNLQNSKM IFCVGSRQIE CKINILKKLE 
NDEFFVHFSF DKNVFLSFDE AFILLQNNRV IGGGKVLNPL SEPLKKEQKN KFLMFLKNKD 
FKAAFSFLKD AHKYGFGLLS SYQRFKLSHQ KALKLAKELN QVFVDEKNLN VYHLQSLEEI 
KNFIKFILEK NPYAMLSAHS LALRITWASE NFCELGLKEM SNLLDFQNGI YFKKGIDFEK 
LQEKNNNQMY EILKKQGIKP EAPYNLYDFL ELDRKSGDNI LKKLTQKGLV VRLSHNLFIE 
KQALEKLMQE CLNLLKNQSL DVQSMKEYFN LSRKYAIAYL EYLDKFPQVS KEAEKRFLTN 
I