Gene BTH_II0712 details

Gene Information

• Locus tag: BTH_II0712
• Symbol: selB
• ID: 3844894
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: +
• Start bp: 834905
• End bp: 836830
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637838017
• Product: selenocysteine-specific translation elongation factor
• Protein accession: YP_438911
• Protein GI: 83717712
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG3276] Selenocysteine-specific translation elongation factor
• TIGRFAM ID: [TIGR00475] selenocysteine-specific elongation factor SelB; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGTCG GAACCGCGGG GCACATCGAT CACGGCAAGA CGACGCTCGT GCGCGCGCTG 
ACGGGCGTCG ACACCGATCG GCTGAAGGAA GAGAAGGCGC GCGGGATCTC GATCGAGCTC 
GGCTACGCGT ACACGCCGCT GCCCAATGGC GACGTGCTCG GCTTCATCGA CGTGCCGGGC 
CACGAGAAGC TCGTCCATAC GATGGCGGCG GGCGCGTGCG GGATCGACTT CGCGCTCGTC 
GTGATCGCCG CCGACGACGG CGTGATGCCG CAGACGCGCG AGCATTTCGC GATTCTGCAA 
CTGCTCGGCG TGACGCGTGG CGCGATCGCG CTCACGAAAT GCGATCGAGT CGACGCGGCG 
CGCATCGCGC AGGTGCGCGA CGAGATCCGT GCGTGGCTCG CGACGTCGCC GCTCGCCGGC 
GCGCCGATCT TCGAGACGCG CGCGACCGAG CCGGGCGATG CGGGTGTCGC CGCATTGAAC 
GCGCACCTGC GCGACACGGC GCTCGCATGG CGCGCGCGAC GCGACGACGG CTTGTTCCGG 
CTGGCGGTCG ATCGCGTGTT CACGCTTGCG GGGCAGGGCA CCGTCGTGAC GGGCACCGCG 
TTCGCGGGAC ATGTGCGCAC GGGCGATACG CTCGCCGTCG CGCGCACGGG TGAAGCGGTG 
CGCGTGCGAA GCATCCATGC GCAGAACCGC GCGACCGACG TCGGCCATGC GGGCGAGCGC 
TGCGCGCTGA ATCTCGCGGG TATCGACAAG GCGGCGCTCG CGCGCGGCGA CGCGATCGTC 
GATCCGCGGC TCGTCGCGCT TTCGCTGCGC ATCGACGTCG AATTGACGTT GACGGCGGAC 
GCCGACGTGA CGATCGCGCA CTGGACGCCG CTGCACGTGC ATCTCGGCAC ACTGCATCGG 
GTCGCGCACG TCGCGCTGCT CGAAGGCGAT ACGCTTGGGC CGGGGCGGTG CGCGCGCGCG 
CAATTGAATT TCGCGGAGCC GGTGTTCGCG GTGCCGGGCG AGCGTTTCAT CGTGCGCAAC 
GCGCAGGCGA CGCGAACGGT GGGCGGCGGG CGCGTGCTCG ATCCGTTCGG CCCCGCGCGC 
AAGCGGCGCA CGAGCGCGCG GCGCGCGTGG CTCGACGCGC TCGCGTCGTG GCTCGACGAA 
GGGCGTCTCG ACGCGCTGCT CGACGAGGCG CCGCTCGGCA TCACGCGAGC GACGCTGATG 
CACCTGACCG GCTTGTCGGC GGATGCATGG GCGTTGCCCG CCGATGCGGT GAACGTCGCC 
GGGCCGGGCA GGCATGCGGA CGAAGCGCGC GTCCTCGCGC GCGGGCATTG GGATGCGTTG 
CGCGCACGCG TGCTCGACGC GCTCGCGACG TTTCATCAGC GTTCGCCCGA CGAGCAGGGG 
CCGGATGTCG CGCGGCTGCG CCGGATCGCG GTGCCGCTCG CGGACGACGC GTTGTGGCGC 
GCGCTGACCG ATGCGTTGAT CGCCGAAGGC GCGATCGTGC GCAGCGGCCC GTGGCTGCAT 
CTGCCGTCGC ACACGGTGAG CTTCGATGCG GCCGAGGAGG CGTTGGCCGG GCGTTTGCTG 
CCGCTCGTCG CGGCGGGCCG CTACGATCCG CCGTGGGTGC GCGATCATGC GGCGACGGCG 
GGCGTCGCGG AGGACGCGGT GCGCGCGTTG CTGCGCAAGC TCGCGCGGCG CGGCGACGTG 
CATCAGGTCG TGCGGGATCT GTTCTATCAC GGCGACGTGA TCTTGGAGCT TGCGCAATTG 
ATCGCGCGAC TCGCGAGCGA GCACGGCGGC GCGCTCGATG CGGCGACGTT TCGCGACGCG 
ACGGGCCTCG GCCGCAAGCG CGCGATTCAA ATTCTCGAGT TCTTCGATCG CGTTGGGTAT 
ACTCGCTTCC ACCGCGATCT TCACTGGTTG CGAGCCGATA GCCGGTTGCT GATCGGTTCG 
CAGTAG 

 

Protein sequence

MIVGTAGHID HGKTTLVRAL TGVDTDRLKE EKARGISIEL GYAYTPLPNG DVLGFIDVPG 
HEKLVHTMAA GACGIDFALV VIAADDGVMP QTREHFAILQ LLGVTRGAIA LTKCDRVDAA 
RIAQVRDEIR AWLATSPLAG APIFETRATE PGDAGVAALN AHLRDTALAW RARRDDGLFR 
LAVDRVFTLA GQGTVVTGTA FAGHVRTGDT LAVARTGEAV RVRSIHAQNR ATDVGHAGER 
CALNLAGIDK AALARGDAIV DPRLVALSLR IDVELTLTAD ADVTIAHWTP LHVHLGTLHR 
VAHVALLEGD TLGPGRCARA QLNFAEPVFA VPGERFIVRN AQATRTVGGG RVLDPFGPAR 
KRRTSARRAW LDALASWLDE GRLDALLDEA PLGITRATLM HLTGLSADAW ALPADAVNVA 
GPGRHADEAR VLARGHWDAL RARVLDALAT FHQRSPDEQG PDVARLRRIA VPLADDALWR 
ALTDALIAEG AIVRSGPWLH LPSHTVSFDA AEEALAGRLL PLVAAGRYDP PWVRDHAATA 
GVAEDAVRAL LRKLARRGDV HQVVRDLFYH GDVILELAQL IARLASEHGG ALDAATFRDA 
TGLGRKRAIQ ILEFFDRVGY TRFHRDLHWL RADSRLLIGS Q