Gene Mkms_5304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_5304 
Symbol 
ID4612988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp5540931 
End bp5542628 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content74% 
IMG OID639795001 
Productselenocysteine-specific translation elongation factor SelB 
Protein accessionYP_941282 
Protein GI119871330 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3276] Selenocysteine-specific translation elongation factor 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTAG TCGCCACCGC CGGACACGTC GACCACGGCA AGTCGACGCT GGTGCAGCGG 
CTCACCGGGA TGTGGCCCGA CCGGCTCGCC GAGGAGCAGC GCCGCGGCCT GACGATCGAC
CTCGGATTCG CCTGGGCCGA CATCGGCGGA CGCGAGATGG CGTTCGTCGA CGTACCGGGA
CATGAGCGGT TCGTCGCGAA CATGCTTGCG GGTGTGGGCC CGGTGCCGGC GGTGATGTTC
GTCGTCGCCG CGACCGAGGG GTGGATGCCG CAGTCCGAGG AGCATCTGGC CGCCCTCGAT
GCGCTCGGTG TGCGACACGC GCTGCTGGTC GTCACGAAGG CCGATCTCAC CGACCCCGCG
CCGGCCGTCG AACAGGCGCT GCACGCCTTC GCCGACACCG GCCTGGCCGC GCCGCCGGTC
GCCGTCAGCA CGGATCTGGA TCACGTCCGC GCCGAGCTGG TGGACCTCGT CGACCGGTTG
CCCGCACCGG ACGCCGGCGC CGACGTCCGG CTCTGGGTCG ACCGCTCCTT CTCGGTGCGC
GGTGCGGGCA CCGTCGTCAC CGGCACGCTC ACCGCGGGAA CCCTCGGGGT GGGTGACGAA
CTCGACCACG CCGGACGCCG CGTCACCGTG CGCGGACTGC AGTCGCTGGG GCAGCAGCGC
AGCGCCGTCG GCCCGGTGGC GCGCGTGGCG GTGAACCTGC GCGGAGTCGA CCGGCGCGAG
ATCGGCCGCG GCGACGCACT GCGCACCGCT GGGGCATGGC TGGACACCGA CGAGGTGGAC
GTCGCGCTGC GCGCCGCCGA CGGTGTGCAC CGCCAACTCG TGTTGCACAT CGGATCGGCC
GCGGTGCCGG TGCATGTCCG CCCCCTTGGC GCCGCCGCCC GCCTGCGGTT GTCACATCCG
CTGCCGCTGC GGGTCGGGGA CGTCGGGTTG TTGCGCGACC CGGGACAGCA CCGCATCGCC
GCCGGGGTCG AGGTGCTCGA CGTGCGGCCA CCGCCGCTGC GGCGCCGGGG CGCGGCACGC
GAGCGCGCCG CGGAGCTGGC CGAGGGACGG ATACGTCCAC CGGTGTGCGC CCGCGCATCG
GATCTGCGTG CGATGGGGTT ACCGCAGACC GGCCGGCGCA TCGGCGCATG GGTGGTCGAC
GAGACGTGGT GGGCACAGCG GCGCGAGCAG GCGGTGGCCG CCGTGCGGCG GTGGTCGGCC
GACCATGACG TGGCCGCCGG GATGCCGCTG GAGACGCTGC GCCGGGAAAC CGGTCTGCCC
GCAGCCGAAC TCGTCACCCC GCTGTTGGCG GGCACCACCC TCGAGGTGTC GGACGGCCGG
GTTCGCCGGC CCGGGATGAC GCTGCCGACC AGGATCGACG AGGCGGTCCG CGCGGTCGAG
AAGTCCTTGG CCGACGACCC GTTCCGCGCA CCGGACGCGG ACACCCTCGG GCAGTTGGGG
CTCGGCACAC CGGAACTGGC CGCGGCGGTG CGGTCCGGGC GGCTGACCCG GATCGCCGAG
GGAGTCGTCC TCGGTGCCGA CGCACTCGAG CGCGCCGCGG AGATCCTCAC CGCGCTCCCC
CAGCCGTTCA CCGTCGCCGA GGCCAAACGC GCACTGGGCA CCACCCGCCG CGTCGCGGTG
CCACTGCTCG AGCAACTCGA CGCGCAGCGG ATCACCCGCC GCGACGCCGA CGGCACCCGC
ACTGTCGCGA AACGCTGA
 
Protein sequence
MYVVATAGHV DHGKSTLVQR LTGMWPDRLA EEQRRGLTID LGFAWADIGG REMAFVDVPG 
HERFVANMLA GVGPVPAVMF VVAATEGWMP QSEEHLAALD ALGVRHALLV VTKADLTDPA
PAVEQALHAF ADTGLAAPPV AVSTDLDHVR AELVDLVDRL PAPDAGADVR LWVDRSFSVR
GAGTVVTGTL TAGTLGVGDE LDHAGRRVTV RGLQSLGQQR SAVGPVARVA VNLRGVDRRE
IGRGDALRTA GAWLDTDEVD VALRAADGVH RQLVLHIGSA AVPVHVRPLG AAARLRLSHP
LPLRVGDVGL LRDPGQHRIA AGVEVLDVRP PPLRRRGAAR ERAAELAEGR IRPPVCARAS
DLRAMGLPQT GRRIGAWVVD ETWWAQRREQ AVAAVRRWSA DHDVAAGMPL ETLRRETGLP
AAELVTPLLA GTTLEVSDGR VRRPGMTLPT RIDEAVRAVE KSLADDPFRA PDADTLGQLG
LGTPELAAAV RSGRLTRIAE GVVLGADALE RAAEILTALP QPFTVAEAKR ALGTTRRVAV
PLLEQLDAQR ITRRDADGTR TVAKR