| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0673 |
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| Symbol | |
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| ID | 8490658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 699475 |
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| End bp | 701382 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 646358708 |
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| Product | selenocysteine-specific translation elongation factor |
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| Protein accession | YP_003238670 |
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| Protein GI | 260892573 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGCGGG TAATCATCGG CACAGCAGGG CATGTAGACC ACGGCAAGAC GGCCCTCATA
AAGGCGCTTA CCGGCATCGA TACCGATCGC CTGAAGGAGG AAAAGGAGCG GGGCATCTCC
ATAGAACTGG GTTTTGCCTA CCTTGACCTT CCCAGCGGCA TAAGGGCGGG AATAGTGGAT
GTTCCTGGGC ACGAGCGCCT GGTGCGGACC ATGCTGGCCG GGGCCCACGG CATAGACCTG
GTGCTGCTGG TGGTGGCAGC AGATGAAGGT GTAATGCCGC AGACGCGGGA ACACGTGGAT
ATAATAGGGT TGCTCGGGAT CGGCCGGGGC GTGGTGGCCC TTACCAAGAT AGATCTGGTG
GAGCCCGACT GGCTGGAATT GGTGCAAGAA GAGGTGAAGG AGTATCTTAC CGGCACCTCT
CTCCGGGACG CTCCCATCGT GCCCGTTTCG GCGGTTACGG GTGAGGGACT GGCGGAGCTT
GTTCGGGTGT TGGACGCCTT GGCTCAAGAG GTAACGGAGA AGCCGGCTAC GGGACCGGTA
CGCCTGCCGC TGGACCGGGT TTTCACCGTT GCGGGGTTCG GTACGGTGGT CACGGGCACT
CTGGTATCAG GCACCATAAG GGTGGGAGAC ACTTTAAGCA TCTTGCCGCC GGGTAAGACG
GTGCGCGTGC GCCAGCTCCA GGTACACAAA CAGCGAGTGG AGGAGGCCCG GGCCGGACAG
CGGGTGGCCG CCAACCTGGT GGGGGTAGAG GCGGGGGAGA TCGAGCGAGG GAACGTGCTG
GTGACCCCGG GAGCCTATTC CGCCGTAACC TTGCTGGACG CCAAGCTTTA TCTTCTGCCT
AACGCCCGGC CCCTCAAGCA CCGGGCCAAG GTGCGCTTTC ACCTGGGAAC CACCGAGGTT
TCGGCGCAGC TGCACCTGCT CGACCGGGAG GAACTGGCCC CGGGAGAGGA GGCCCTTCTG
CAACTCCTGC TGGAGGAGCC GGTGGTGGCG GCCAAGGAAG ACAGGTTTGT CATCCGTTCC
TTTTCTCCAC CTTTAACTGT AGGCGGGGGG AGGGTGCTGG CCCTACCCCG GATGAAGTAT
AAGCGCTTTC GTCCGGAGGT GCTGCAATAT CTGGGCCGGC TGGCCGAGGG GGAGCTCAAG
GATCAGGTCG AGGCTTACCT GCACAAGGAA AACCGGCCGG TGAGTTTGGG AACAATAGCG
GAAGCGCTGA CCGAAGAGAA GGAAAGGGTA ATACAGGTCC TGGAGGAGCT ATCCAACGAG
GAGAAGGTAA AGCTCATAAA GGTAGAGGGG CAGGTCTACG CCTGCGCCGC TACCGCTTAC
CGGCAGCTGC GCGAGAAGGC TTGCTCCCTG GTCGCCCGCT ACCTGGAAGA GTATCCCTTG
CGCGAGGGAA TGCCCAAAGA GGAGCTGCGC TCGCGGCTGC TGCCCCAGTT CGGGGTGCGG
GCCTTCCAGG CCCTGCTGGA GGAATGGGCA GGTGAGGGAG CGTTAAGCCT CACCGCGCAG
GCGGTGAGCC TGCCCGGGCA GGCCCACCCT TCGGCGGAAG ACCAGGAGCG CATTGCCTCC
CTGGAAGAAG TCTACCGGCG CGGAGGGTTA CAACCCCCTT CTCTGCGGGA AGCTGCCTCG
CTCATAGGGG TAGAGGAGAA AAGGGCGGAG GAGTATCAGG GTTATCTCTT GCGCAGCGGA
CGGCTGGTCA AGGTGGCCGA GGGTATAATT TTTCATCAGG AAGTGCTGGC AGCGGCTGAG
GCCCAGGTAG TGGCTGCCCT CAAGGAACGA GGAGAGATTA CGGTGGCCGA GGTCCGCGAC
CTCCTGTCCA CCTCCCGCAA GTATGTGGTA CCCCTGCTGG AATACCTCGA CGGGAAAAGG
GTGACCAGAA GAGTAGGGGA CAAAAGGGTG CTGGTTAAAA AGGGGTGA
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| Protein sequence | MKRVIIGTAG HVDHGKTALI KALTGIDTDR LKEEKERGIS IELGFAYLDL PSGIRAGIVD
VPGHERLVRT MLAGAHGIDL VLLVVAADEG VMPQTREHVD IIGLLGIGRG VVALTKIDLV
EPDWLELVQE EVKEYLTGTS LRDAPIVPVS AVTGEGLAEL VRVLDALAQE VTEKPATGPV
RLPLDRVFTV AGFGTVVTGT LVSGTIRVGD TLSILPPGKT VRVRQLQVHK QRVEEARAGQ
RVAANLVGVE AGEIERGNVL VTPGAYSAVT LLDAKLYLLP NARPLKHRAK VRFHLGTTEV
SAQLHLLDRE ELAPGEEALL QLLLEEPVVA AKEDRFVIRS FSPPLTVGGG RVLALPRMKY
KRFRPEVLQY LGRLAEGELK DQVEAYLHKE NRPVSLGTIA EALTEEKERV IQVLEELSNE
EKVKLIKVEG QVYACAATAY RQLREKACSL VARYLEEYPL REGMPKEELR SRLLPQFGVR
AFQALLEEWA GEGALSLTAQ AVSLPGQAHP SAEDQERIAS LEEVYRRGGL QPPSLREAAS
LIGVEEKRAE EYQGYLLRSG RLVKVAEGII FHQEVLAAAE AQVVAALKER GEITVAEVRD
LLSTSRKYVV PLLEYLDGKR VTRRVGDKRV LVKKG
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