| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1810 |
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| Symbol | |
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| ID | 3568006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1945025 |
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| End bp | 1946908 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637680281 |
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| Product | selenocysteine-specific translation elongation factor SelB |
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| Protein accession | YP_285026 |
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| Protein GI | 71907439 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.251758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCG GCACCGCCGG CCATATCGAC CACGGCAAGA CCACACTGGT CAAAGCCCTG
ACCGGCGTCG ACTGTGACCG CCTGAAGGAA GAAAAGGCCC GCGGCATCAC CGTCGACCTC
GGCTACGCCT ACACGCCGAC GCTGGGTTTC ATCGACGTGC CCGGTCACGA AAAGCTGATC
CACAACATGC TGGCCGGCGC CACCGGCATC GATTTCGCCT TGCTCGTCAT TGCCGCCGAT
GACGGCCCAA TGCCGCAGAC GCGCGAGCAT CTGGAAATCA TCGAACTGCT CGGCATCAAG
CGCGGCGCCG TGGCGCTGAC CAAGATCGAT AATGCCTCGG CCGAACGCCA GCAACAGGCA
AAAGCCGAAA TCGCCGAATT GCTTGCCAGC ACGGCCCTGG CCGATGCCCC AATCTTCCCG
GTTGCCCCCA TCAGCGGCGA AGGCATCGCC GAACTGCGCG CATATCTCGA AGAGCAATCC
AGCCTCCCCT CGCCCGAACG CTTGAAGAAA GCCGGCGGCT TCCGCCTCGC CGTCGACCGC
TGCTTCACCC TCTCCGGCGC CGGCACCGTC GTCACCGGCA CCGCCTTCGC CGGCAGCGTC
AAGGCCGGCG ACCAGTTGCT GCTCTCGCCG CCCAACAAGC CAGTGCGTGT GCGCAGCCTG
CGCGTGCAGG ACGCCCCGGC CGAATCCGGC CACGCCGGGC AACGCATCGC CTTGGCGCTA
TCCGGCATCG AAAAATCCGA CGTCGAACGC GGTATGTGGA TCCTTGCCCC GGCACTGCAT
TTCCCGGTCC GCCGATTCGA CGCCAAAATC CGCGTCCTCT CCGGCCAGCC GGCACTCAAG
CACTGGACGC AGGTGCATTT GCACTTGGGC GCCGAAGACG TCCCGGCCCG TGTTGCTTTA
CTCGGCACAA CCGAGATCGC CCCGGGCAGC GAACACTGGG CGCAAATCAC CGTCGACCGC
GAGATCGGCA CACTGGCCGG CGACCGCTTC ATCCTGCGCG ATGCCTCGGC CCGCCACACC
ATCGGCGGCG GTCAGGTGCT CGACATCTTC CCGCCCAGCC GCAAGAAAGG CAGCCCGGAA
CGCCTGGCCA TGCTCACCGC GCTGGCCGAC GAAAACCCCG CCACCGCGCT GCAACTCGCC
ACCGAACAAC AAACCGCTGG CGTCGAACTC GACACCTATG CGCTGAATCG AAATCTCGAC
CCGGCCACGC TACAGACCAT CACCGGCCAA CTGAACCTCA AGCGGGTCGG CAATATCGCG
TTCTCGCCAA GCCACTGGCT GGCCCTCGAA GCAAAGCTGC TCGCCGCGCT GGCCGCCGAA
CACGAACGCG CCCCGGACAT GCCCGGCATC GAACGCGACC GCCTGCGCCG CCTGACGCTG
CCGACGCTCT CCCGCCCGGC TTTCGATGCC TTGCTGGCCG AACCTTTGGC CAGCGGCCGC
ATCGCCCAGA CCAACGCCTG GCTGCACCTG CCGGAACACC GCGTGCAGAT GGCCGCCAGC
GACCGCGACC TGTGGCAAAC GCTGAAGCCG CTGCTCGATG CCGAACCCTA TGGCCCGCCG
CGCGTTCGCG ATGTCGCAAA AGCCACCGGC ATCGGCGAAG ACACCGTCCG CGCCCTGTTC
AAGCGGGTCG CCCGCATCGG TGAGGCCTAC CCGGTGGCGC ATGACCACTA CTTCACCGCC
AGCGCCGTGG CCGCCCTCGC CCGCTACGTC GCTGCGCTCA ACACCGAACA CGGTTTCGCC
CGCGCCGCCA GCCTGCGCGA CCAGATCGGC GGCGGCCGCA AGGTCGCCAT CCACATCCTC
GAATTCTTCG ACCGCATCGG CTACACTCGC CGGGTGCGCG ACACCCACGT GCTGCGCGGT
TCGCCGGAGC AATTCGGTTC ATGA
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| Protein sequence | MIIGTAGHID HGKTTLVKAL TGVDCDRLKE EKARGITVDL GYAYTPTLGF IDVPGHEKLI
HNMLAGATGI DFALLVIAAD DGPMPQTREH LEIIELLGIK RGAVALTKID NASAERQQQA
KAEIAELLAS TALADAPIFP VAPISGEGIA ELRAYLEEQS SLPSPERLKK AGGFRLAVDR
CFTLSGAGTV VTGTAFAGSV KAGDQLLLSP PNKPVRVRSL RVQDAPAESG HAGQRIALAL
SGIEKSDVER GMWILAPALH FPVRRFDAKI RVLSGQPALK HWTQVHLHLG AEDVPARVAL
LGTTEIAPGS EHWAQITVDR EIGTLAGDRF ILRDASARHT IGGGQVLDIF PPSRKKGSPE
RLAMLTALAD ENPATALQLA TEQQTAGVEL DTYALNRNLD PATLQTITGQ LNLKRVGNIA
FSPSHWLALE AKLLAALAAE HERAPDMPGI ERDRLRRLTL PTLSRPAFDA LLAEPLASGR
IAQTNAWLHL PEHRVQMAAS DRDLWQTLKP LLDAEPYGPP RVRDVAKATG IGEDTVRALF
KRVARIGEAY PVAHDHYFTA SAVAALARYV AALNTEHGFA RAASLRDQIG GGRKVAIHIL
EFFDRIGYTR RVRDTHVLRG SPEQFGS
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