| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5526 |
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| Symbol | selB |
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| ID | 5354295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5687631 |
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| End bp | 5689556 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640814571 |
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| Product | selenocysteine-specific elongation factor |
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| Protein accession | YP_001350847 |
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| Protein GI | 152987216 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCGTCG GCACCGCCGG GCATATCGAC CACGGCAAGA CCTCGCTGCT GCGCGCCCTC
ACCGGGATCG AAGGCGACCG CCGTCCGGCC GAGCGCCAGC GCGGCATCAC CATCGACCTC
GGCTATTTGT ACGCCGACCT CGGCGATGGC AGCCCCACCG GTTTCATCGA CGTGCCCGGC
CACGAGCGCT TCGTCCACAA CATGCTGGCC GGCGCCAGCG GCATCGATTG CGTGCTGCTG
GTGGTGGCCG CCGACGACGG CCTGATGCCG CAGACCCGCG AGCATCTGTC GATTGTCGAG
CTGCTCGGTA TCCGCCGGGC ACTGGTGGCG CTGACCAAGA TCGACCGGGT CGAGCCGCAG
CGGGTGCAGC AGGTGCAGAT CCAGGTCGAG CACCTGCTGG CCTCCGGACC GCTGGCGCGC
TCGCCGATCT TTCCGCTCTC CAGCAGCAGC GGTGAGGGCG TGGCGGCGTT GCGCGAGGCT
CTGCGCGGGC TTGCCGGCGA AGTCCGCGAG CGCGGCCGCG AAGGGTATTT CCGGCTGGCG
GTGGACCGGG CCTTCAGCGT CGCCGGCAGC GGCATCGTGG TCACCGGCAC GGCCTTCTCC
GGACAGGTCG CGGTGGGCGA TGAACTGCTC CTCGGCAACG CCGGGCGGCC GGTGCGGGTG
CGCGGCCTGC ACGCGCAGAA CCGGCCCGCG CAACAGGCCT GGGCCGGCCA GCGCGTGGCC
CTGAACATCG CCGGCGAGCG CCTCGCGCTG GAGCAGGTCC AGCGCGGCGA CTGGCTGCTG
CAGGCAGCGC TGCACGCGCC GACCACGCGG GTCGACATCG ACTTTCGCCT GCTCCCCGAC
GAACTCCGCG ACTTCACCCA CTGGACCCCG GTGCACCTGC ACCTGGGGAC CCAGGACGTC
ACCGGGCGCC TGGCCCTGCT CGAGGGCGAG CAACTGGAAC CTGGCCATCG CGCCTTCGCC
CAACTGGTGC TGAACGCGCC GATCCAGGCC CTGCACGGCG ATCGCCTGGT GCTGCGCGAC
CAGTCGGCGC AGCGCACCCT CGGCGGCGGA CGGGTGCTCG ACAGCGCCGC GCCGGCGCGC
AACCGGCGAA CCCCGGCGCG TCTGGCGCAA CTCCAGGCGC TGCGCCAGGA CAGCCTGGAG
GAGGCGCTGC CGACCCTGCT CGGCGCCGCC GAGAACGGCC TCGATCCGCA ACGCCTGGTG
CAACTGTTCA ACCGCCCGCG CGAGCACTGG CGGCTGCCGG AGGAGATGGT CGAGGTACAG
ACCCGCCTCG GCCCGCGGCT GTTCGCCGGC GAGCGCTGGT TCGCCCTGGT CGAGCGACTG
CTCGCCGGCC TGCGGCGCTT CCATGAGGAA TTGCCGGACG AACTCGGCCC AGACCGCGAC
CGCCTGCGCC GCTATGCCCT GCCGCAGCTC GAGCGGCCGG TGTTCATCGC CCTGCTGGAG
GCCGCCCTGG CCGGCGGCGA CGTGCACAGC AGCGGCCCCT GGCTGCACCT GCCCGGCCAC
GAGGTACGCC TGAGCGACAG CGAGGAACAG TTGCGCGCGC GCCTCTGGCC ATTGCTCGAA
GCCGGCCGCT ACGACCCGCC CTGGGTCCGC GACCTGGCTC GCGAGCTGGG CCAGGACGAA
GCCGCCATGC GCCACCTGTT GCGCAAGCTG GCGCGCCTGG GCCAGGTGCA GCAGGTGGTG
CGCGACCTGT TTTACCCGGA GGCCACCCTG CGCCAGTTGG CCGGGATCGC TCTGCAGGTG
CGCGACCCGT CCGGGCTGAT CCGTCCGGCG GAGTTCCGCG ACCGCCTGGG TATCGGCCGC
AAGCGCAGCA TCCAGATCCT CGAGCATTTC GACCGCATCG GCCTGACCCG CCGCATCGGC
AATGACCGCC GCCTACGTGA GGGCTCGGCG CTGGCCGAAC AGTTGCTCGG TGGGTCCACG
TCCTGA
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| Protein sequence | MIVGTAGHID HGKTSLLRAL TGIEGDRRPA ERQRGITIDL GYLYADLGDG SPTGFIDVPG
HERFVHNMLA GASGIDCVLL VVAADDGLMP QTREHLSIVE LLGIRRALVA LTKIDRVEPQ
RVQQVQIQVE HLLASGPLAR SPIFPLSSSS GEGVAALREA LRGLAGEVRE RGREGYFRLA
VDRAFSVAGS GIVVTGTAFS GQVAVGDELL LGNAGRPVRV RGLHAQNRPA QQAWAGQRVA
LNIAGERLAL EQVQRGDWLL QAALHAPTTR VDIDFRLLPD ELRDFTHWTP VHLHLGTQDV
TGRLALLEGE QLEPGHRAFA QLVLNAPIQA LHGDRLVLRD QSAQRTLGGG RVLDSAAPAR
NRRTPARLAQ LQALRQDSLE EALPTLLGAA ENGLDPQRLV QLFNRPREHW RLPEEMVEVQ
TRLGPRLFAG ERWFALVERL LAGLRRFHEE LPDELGPDRD RLRRYALPQL ERPVFIALLE
AALAGGDVHS SGPWLHLPGH EVRLSDSEEQ LRARLWPLLE AGRYDPPWVR DLARELGQDE
AAMRHLLRKL ARLGQVQQVV RDLFYPEATL RQLAGIALQV RDPSGLIRPA EFRDRLGIGR
KRSIQILEHF DRIGLTRRIG NDRRLREGSA LAEQLLGGST S
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