More than 300 homologs were found in PanDaTox collection
for query gene Gobs_0180 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_0180  methyl-accepting chemotaxis sensory transducer  100 
 
 
414 aa  794    Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.252383  n/a   
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  45.61 
 
 
702 aa  141  1.9999999999999998e-32  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
730 aa  140  3e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  39.9 
 
 
545 aa  139  1e-31  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_013223  Dret_2373  methyl-accepting chemotaxis sensory transducer  40.44 
 
 
718 aa  135  9.999999999999999e-31  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  40 
 
 
567 aa  135  9.999999999999999e-31  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_011884  Cyan7425_3699  histidine kinase  35.37 
 
 
998 aa  134  3e-30  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
566 aa  134  3e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  40.09 
 
 
715 aa  134  3.9999999999999996e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_007925  RPC_3378  methyl-accepting chemotaxis sensory transducer  40.31 
 
 
563 aa  133  5e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.104618  normal 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  40.49 
 
 
587 aa  133  5e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  40 
 
 
566 aa  133  5e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  39.46 
 
 
1150 aa  133  6e-30  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  36.63 
 
 
904 aa  133  6.999999999999999e-30  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_007498  Pcar_1077  sensory box/GGDEF family protein  40.24 
 
 
808 aa  132  7.999999999999999e-30  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  38.89 
 
 
565 aa  132  7.999999999999999e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007925  RPC_0061  methyl-accepting chemotaxis sensory transducer  41.62 
 
 
674 aa  132  7.999999999999999e-30  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  37.37 
 
 
740 aa  132  9e-30  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  41.24 
 
 
518 aa  132  9e-30  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  36.63 
 
 
562 aa  132  1.0000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  39.09 
 
 
731 aa  132  1.0000000000000001e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_009675  Anae109_3046  putative PAS/PAC sensor protein  42.37 
 
 
660 aa  131  2.0000000000000002e-29  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0342  methyl-accepting chemotaxis sensory transducer  37.1 
 
 
699 aa  131  2.0000000000000002e-29  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
730 aa  130  3e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_009664  Krad_1217  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
710 aa  130  4.0000000000000003e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.142887  normal  0.0205131 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  39.8 
 
 
552 aa  130  4.0000000000000003e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  40.21 
 
 
533 aa  130  6e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  41.38 
 
 
540 aa  129  8.000000000000001e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  40.21 
 
 
565 aa  129  1.0000000000000001e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007643  Rru_A2366  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
560 aa  129  1.0000000000000001e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196109  n/a   
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  39.9 
 
 
602 aa  129  1.0000000000000001e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1160  chemotaxis sensory transducer  42.69 
 
 
559 aa  128  2.0000000000000002e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
675 aa  128  2.0000000000000002e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  39.69 
 
 
563 aa  128  2.0000000000000002e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  41.62 
 
 
676 aa  128  2.0000000000000002e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  35.55 
 
 
563 aa  128  2.0000000000000002e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  33.98 
 
 
714 aa  128  2.0000000000000002e-28  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_007643  Rru_A0568  chemotaxis sensory transducer  41.58 
 
 
662 aa  127  3e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  38.38 
 
 
567 aa  127  3e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  38.74 
 
 
655 aa  127  3e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_007925  RPC_4101  methyl-accepting chemotaxis sensory transducer  40.64 
 
 
698 aa  127  3e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  39.5 
 
 
573 aa  127  4.0000000000000003e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  37.31 
 
 
569 aa  126  6e-28  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  38.43 
 
 
674 aa  126  6e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_013521  Sked_30970  methyl-accepting chemotaxis protein  39.11 
 
 
562 aa  126  6e-28  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  37.72 
 
 
563 aa  126  7e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  41.58 
 
 
561 aa  126  8.000000000000001e-28  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0120  chemotaxis sensory transducer  41.43 
 
 
445 aa  125  9e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.118781  n/a   
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  38.54 
 
 
670 aa  126  9e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  38.05 
 
 
673 aa  126  9e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
568 aa  126  9e-28  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  38.57 
 
 
656 aa  125  1e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  40.21 
 
 
656 aa  125  1e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  38.58 
 
 
561 aa  125  2e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  39.38 
 
 
564 aa  124  2e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_007778  RPB_1716  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
564 aa  125  2e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0822312  normal  0.62395 
 
 
-
 
NC_013093  Amir_3089  methyl-accepting chemotaxis sensory transducer  41.78 
 
 
526 aa  124  2e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  37.17 
 
 
572 aa  124  2e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  40.41 
 
 
667 aa  125  2e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  38.07 
 
 
672 aa  125  2e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  37.88 
 
 
561 aa  124  2e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_007406  Nwi_2996  methyl-accepting chemotaxis protein  39.53 
 
 
698 aa  124  3e-27  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2467  putative methyl-accepting chemotaxis protein (MCP)  33.33 
 
 
729 aa  124  3e-27  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2460  chemotaxis sensory transducer  36.16 
 
 
565 aa  124  3e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2546  chemotaxis sensory transducer  37.99 
 
 
690 aa  124  3e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  37.79 
 
 
688 aa  124  3e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  37.96 
 
 
741 aa  124  3e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
560 aa  124  3e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_007925  RPC_4809  methyl-accepting chemotaxis sensory transducer  37.77 
 
 
563 aa  124  3e-27  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  38.54 
 
 
691 aa  124  3e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  38.61 
 
 
560 aa  124  4e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  41.87 
 
 
538 aa  124  4e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.32 
 
 
564 aa  123  6e-27  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  38.58 
 
 
563 aa  123  6e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  36.07 
 
 
561 aa  123  6e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_009485  BBta_7375  methyl-accepting chemotaxis sensory transducer  43.02 
 
 
655 aa  123  6e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_07600  methyl-accepting chemotaxis protein  41.62 
 
 
533 aa  123  6e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0696595 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  39.04 
 
 
568 aa  123  7e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_009485  BBta_4739  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
450 aa  123  7e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  36.15 
 
 
858 aa  122  8e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  39.79 
 
 
686 aa  122  8e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
563 aa  122  8e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  38.92 
 
 
542 aa  122  8e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  38.46 
 
 
675 aa  122  8e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  38.74 
 
 
697 aa  122  9e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  41.07 
 
 
577 aa  122  9e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  44.31 
 
 
561 aa  122  9.999999999999999e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.17 
 
 
533 aa  122  9.999999999999999e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_009485  BBta_4931  putative methyl-accepting chemotaxis protein  39.42 
 
 
567 aa  122  9.999999999999999e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  40.41 
 
 
689 aa  122  9.999999999999999e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  40.76 
 
 
556 aa  122  9.999999999999999e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  37.5 
 
 
561 aa  122  9.999999999999999e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37 
 
 
716 aa  122  9.999999999999999e-27  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1080  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
698 aa  122  9.999999999999999e-27  Nitrobacter hamburgensis X14  Bacteria  normal  0.0139762  n/a   
 
 
-
 
NC_011004  Rpal_2142  methyl-accepting chemotaxis sensory transducer  38.42 
 
 
428 aa  122  1.9999999999999998e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.293169  n/a   
 
 
-
 
NC_013521  Sked_20550  methyl-accepting chemotaxis protein  43.21 
 
 
733 aa  122  1.9999999999999998e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.375054  normal  0.44591 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  37.63 
 
 
561 aa  121  1.9999999999999998e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_013521  Sked_36620  methyl-accepting chemotaxis protein  39.82 
 
 
543 aa  121  1.9999999999999998e-26  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0835028  normal  0.811978 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  38.66 
 
 
542 aa  122  1.9999999999999998e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  37.06 
 
 
674 aa  121  1.9999999999999998e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
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