More than 300 homologs were found in PanDaTox collection
for query gene Dret_2373 on replicon NC_013223
Organism: Desulfohalobium retbaense DSM 5692



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013223  Dret_0342  methyl-accepting chemotaxis sensory transducer  61.85 
 
 
699 aa  827    Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2373  methyl-accepting chemotaxis sensory transducer  100 
 
 
718 aa  1451    Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2467  putative methyl-accepting chemotaxis protein (MCP)  35.72 
 
 
729 aa  396  1e-109  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1009  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.47 
 
 
569 aa  387  1e-106  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.103849  normal  0.0253995 
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
702 aa  355  1e-96  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  41.38 
 
 
740 aa  334  3e-90  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_007498  Pcar_1077  sensory box/GGDEF family protein  39.22 
 
 
808 aa  326  1e-87  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0659  methyl-accepting chemotaxis sensory transducer  52.21 
 
 
798 aa  324  4e-87  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0660  methyl-accepting chemotaxis sensory transducer  51.12 
 
 
675 aa  301  3e-80  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.84238 
 
 
-
 
NC_013223  Dret_1505  methyl-accepting chemotaxis sensory transducer  55.21 
 
 
791 aa  301  4e-80  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0144234 
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  30.14 
 
 
719 aa  291  2e-77  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  29.87 
 
 
715 aa  291  4e-77  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_013521  Sked_20550  methyl-accepting chemotaxis protein  30.4 
 
 
733 aa  290  7e-77  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.375054  normal  0.44591 
 
 
-
 
NC_013223  Dret_0933  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
780 aa  289  1e-76  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.156704 
 
 
-
 
NC_011884  Cyan7425_3699  histidine kinase  32.66 
 
 
998 aa  285  2.0000000000000002e-75  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3046  putative PAS/PAC sensor protein  42.6 
 
 
660 aa  283  5.000000000000001e-75  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1816  periplasmic sensor hybrid histidine kinase  35.81 
 
 
977 aa  278  3e-73  Synechococcus elongatus PCC 7942  Bacteria  normal  0.218789  normal  0.39116 
 
 
-
 
NC_010682  Rpic_3412  methyl-accepting chemotaxis sensory transducer  36.2 
 
 
662 aa  271  2e-71  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3066  methyl-accepting chemotaxis sensory transducer  36.02 
 
 
662 aa  269  2e-70  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6894  methyl-accepting chemotaxis sensory transducer  32.76 
 
 
657 aa  269  2e-70  Burkholderia phytofirmans PsJN  Bacteria  normal  0.068141  normal  0.373533 
 
 
-
 
NC_010623  Bphy_4315  methyl-accepting chemotaxis sensory transducer  35.37 
 
 
656 aa  267  5e-70  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3136  putative methyl-accepting chemotaxis transmembrane protein  35.21 
 
 
661 aa  266  8e-70  Ralstonia solanacearum GMI1000  Bacteria  normal  0.598743  normal 
 
 
-
 
NC_007952  Bxe_B2939  methyl-accepting chemotaxis sensory transducer  32.77 
 
 
672 aa  266  8e-70  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1217  methyl-accepting chemotaxis sensory transducer  29.93 
 
 
710 aa  261  4e-68  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.142887  normal  0.0205131 
 
 
-
 
NC_010086  Bmul_4309  methyl-accepting chemotaxis sensory transducer  30.47 
 
 
659 aa  256  9e-67  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.226298 
 
 
-
 
NC_010571  Oter_3353  methyl-accepting chemotaxis sensory transducer  54.74 
 
 
527 aa  245  1.9999999999999999e-63  Opitutus terrae PB90-1  Bacteria  normal  0.416651  normal  0.952681 
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  28.36 
 
 
686 aa  241  5e-62  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3594  methyl-accepting chemotaxis sensory transducer  31.54 
 
 
646 aa  237  6e-61  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1684  methyl-accepting chemotaxis protein I  31.74 
 
 
676 aa  237  7e-61  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0792  methyl-accepting chemotaxis sensory transducer  30.57 
 
 
651 aa  236  1.0000000000000001e-60  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3437  methyl-accepting chemotaxis sensory transducer  29.22 
 
 
646 aa  236  1.0000000000000001e-60  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.143807  n/a   
 
 
-
 
NC_010571  Oter_0614  methyl-accepting chemotaxis sensory transducer  49.2 
 
 
541 aa  236  1.0000000000000001e-60  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A0994  methyl-accepting chemotaxis protein  31.41 
 
 
678 aa  234  5e-60  Burkholderia pseudomallei 1106a  Bacteria  normal  0.799426  n/a   
 
 
-
 
NC_010571  Oter_0611  methyl-accepting chemotaxis sensory transducer  52.28 
 
 
547 aa  234  6e-60  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4192  methyl-accepting chemotaxis sensory transducer  31.93 
 
 
660 aa  233  1e-59  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0520721  normal  0.510764 
 
 
-
 
NC_008391  Bamb_3714  methyl-accepting chemotaxis sensory transducer  32.03 
 
 
660 aa  231  2e-59  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_3221  methyl-accepting chemotaxis sensory transducer  31.58 
 
 
660 aa  231  3e-59  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.229974 
 
 
-
 
NC_008061  Bcen_4070  methyl-accepting chemotaxis sensory transducer  31.79 
 
 
660 aa  230  6e-59  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4296  methyl-accepting chemotaxis sensory transducer  31.79 
 
 
660 aa  230  6e-59  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0657  methyl-accepting chemotaxis sensory transducer  52.94 
 
 
617 aa  230  8e-59  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0772  methyl-accepting chemotaxis sensory transducer  27.58 
 
 
646 aa  229  1e-58  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00540264  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2308  methyl-accepting chemotaxis protein II  31.09 
 
 
684 aa  227  6e-58  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  35.88 
 
 
587 aa  227  7e-58  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_009436  Ent638_0366  methyl-accepting chemotaxis sensory transducer  32.08 
 
 
643 aa  227  7e-58  Enterobacter sp. 638  Bacteria  normal  normal  0.0151066 
 
 
-
 
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  32.18 
 
 
680 aa  225  3e-57  Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_009075  BURPS668_A1080  methyl-accepting chemotaxis protein  30.76 
 
 
687 aa  224  4e-57  Burkholderia pseudomallei 668  Bacteria  normal  0.469209  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  36.95 
 
 
585 aa  221  3.9999999999999997e-56  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  35.21 
 
 
584 aa  221  5e-56  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0384  methyl-accepting chemotaxis sensory transducer  42.82 
 
 
671 aa  218  2e-55  Opitutus terrae PB90-1  Bacteria  normal  normal  0.916816 
 
 
-
 
NC_010571  Oter_0364  methyl-accepting chemotaxis sensory transducer  47.37 
 
 
561 aa  217  5.9999999999999996e-55  Opitutus terrae PB90-1  Bacteria  normal  0.056342  normal  0.0235537 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.72 
 
 
584 aa  216  9.999999999999999e-55  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_009012  Cthe_3030  methyl-accepting chemotaxis sensory transducer  48 
 
 
832 aa  215  1.9999999999999998e-54  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00284544  n/a   
 
 
-
 
NC_012880  Dd703_1028  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.93 
 
 
532 aa  213  7.999999999999999e-54  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  34.65 
 
 
544 aa  213  7.999999999999999e-54  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_009012  Cthe_0298  methyl-accepting chemotaxis sensory transducer  50 
 
 
600 aa  212  2e-53  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.000000337227  n/a   
 
 
-
 
NC_010571  Oter_0815  methyl-accepting chemotaxis sensory transducer  46.9 
 
 
538 aa  209  1e-52  Opitutus terrae PB90-1  Bacteria  normal  0.260319  normal  0.290459 
 
 
-
 
NC_009012  Cthe_1498  methyl-accepting chemotaxis sensory transducer  50.98 
 
 
602 aa  208  3e-52  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1355  putative methyl-accepting chemotaxis protein (MCP)  49.61 
 
 
744 aa  208  4e-52  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_4504  methyl-accepting chemotaxis sensory transducer  45 
 
 
521 aa  207  4e-52  Opitutus terrae PB90-1  Bacteria  normal  normal  0.249783 
 
 
-
 
NC_012034  Athe_1768  methyl-accepting chemotaxis sensory transducer  46.95 
 
 
516 aa  206  8e-52  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2364  putative methyl-accepting chemotaxis protein (MCP)  51.74 
 
 
702 aa  206  1e-51  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2313  methyl-accepting chemotaxis sensory transducer  49.62 
 
 
567 aa  206  1e-51  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  29.79 
 
 
674 aa  205  2e-51  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0140  putative methyl-accepting chemotaxis protein  30.94 
 
 
684 aa  204  3e-51  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0610174  n/a   
 
 
-
 
NC_007498  Pcar_1372  putative methyl-accepting chemotaxis protein (MCP)  45.59 
 
 
706 aa  204  4e-51  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  30.62 
 
 
674 aa  204  4e-51  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_011891  A2cp1_2579  methyl-accepting chemotaxis sensory transducer  46.32 
 
 
905 aa  204  6e-51  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  35.8 
 
 
513 aa  204  6e-51  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
519 aa  204  6e-51  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
513 aa  204  6e-51  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_2163  methyl-accepting chemotaxis sensory transducer  44.37 
 
 
610 aa  201  3e-50  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  36.96 
 
 
515 aa  201  6e-50  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  46.15 
 
 
740 aa  200  6e-50  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  47.15 
 
 
583 aa  199  1.0000000000000001e-49  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_011899  Hore_22560  methyl-accepting chemotaxis sensory transducer  33.4 
 
 
659 aa  199  2.0000000000000003e-49  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2483  methyl-accepting chemotaxis sensory transducer  55.98 
 
 
905 aa  199  2.0000000000000003e-49  Anaeromyxobacter sp. K  Bacteria  normal  0.611307  n/a   
 
 
-
 
NC_007498  Pcar_2967  methyl-accepting chemotaxis protein (MCP)  48.48 
 
 
695 aa  199  2.0000000000000003e-49  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000011738  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.43 
 
 
515 aa  198  3e-49  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  46.37 
 
 
548 aa  198  3e-49  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  33.5 
 
 
541 aa  198  3e-49  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
521 aa  198  3e-49  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  33.58 
 
 
521 aa  197  4.0000000000000005e-49  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  31.77 
 
 
520 aa  197  5.000000000000001e-49  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  45.34 
 
 
779 aa  197  5.000000000000001e-49  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  36.43 
 
 
515 aa  197  5.000000000000001e-49  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  47.27 
 
 
508 aa  197  6e-49  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_012912  Dd1591_3031  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.06 
 
 
529 aa  197  7e-49  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  32.39 
 
 
585 aa  196  9e-49  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_007760  Adeh_1374  methyl-accepting chemotaxis sensory transducer  55.96 
 
 
908 aa  196  9e-49  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  36.14 
 
 
513 aa  196  1e-48  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  46.4 
 
 
527 aa  196  1e-48  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  47.66 
 
 
569 aa  196  1e-48  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  43.14 
 
 
567 aa  195  2e-48  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  33.63 
 
 
515 aa  195  3e-48  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  34.02 
 
 
542 aa  194  4e-48  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  36.58 
 
 
545 aa  194  7e-48  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
578 aa  193  9e-48  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  34.07 
 
 
513 aa  193  9e-48  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_007575  Suden_0972  methyl-accepting chemotaxis sensory transducer  40.97 
 
 
535 aa  193  9e-48  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  44.14 
 
 
578 aa  193  1e-47  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
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