Gene PC1_3437 details

Gene Information

• Locus tag: PC1_3437
• ID: 8134417
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 3881323
• End bp: 3883263
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 644866738
• Product: methyl-accepting chemotaxis sensory transducer
• Protein accession: YP_003018989
• Protein GI: 253689799
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.143807
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTGGGAC TTTCCTTTAA ACACTGGGGT TTGGGTATCA AGTTATCAAT TATCGCCTCC 
CTGAGCGTGG CGATATTGTT CATTGTCTTC ACCCTCACTC TTACCCGCTC CGCAGGCAAT 
CAGCTGAAAT CTTTGACCCT CAATGACATG CAGAGCCAGG TGAATGGAGT CACCGACATG 
ATCAACATGT ACGATACCAG CCTACAAGCC GAGGTCAGCA ACTATACGCG TCTGCTGGCA 
AGCTTTCTGC CAACGCAGTT TTCGCTGGAT ACCGTTAACC GCACGCCTTT CGGCAACGCT 
TCTCAGCCAA CGCTTAAGGC TGGCGATACG GTCTTGAACC TCAACACCGA AGTGCCAGAT 
GACTTTCTGA GCCGTACCCA CGCGATCTCA ACGATTTTTG TCCGCGATGG AGAAGATTTT 
ACGCGCGTCA CCACGTCACT GAAAAAAGAA GACGGATCGC GCGCGATGGG CACCAAGCTC 
GACCGTGAGA GCCCAGCCTA TGCCCTCGTG ATGAAAGGTG AAACCTACAG TGGGCTAGCA 
ACGCTGTTCG GCAAACAGTA CATCACCCAG TACCAGCCGA TACGCGACAG TGCCAGCAAG 
GTTATCGGCA TTCTGTTCGT CGGTGTCGAC ATCACGAAGC AATTTACCGA GATGCAACAA 
ACGATTCTGA ACAAAAAAAT GGGTGAGACA GGCCATTTCT TTGTGCTTAA TACGAAAAAA 
GGAAAAGATG CGGGCAACTA CCTTTACCAC CAAAGCAACG CCAACCAGCG CCCTGACTGG 
TCGGAAGGTG CGTTAGAGAA AGTGCTGGCA ACCGGTAATG GCACGATCGA ATACGACAAC 
AACACGATGA CCGGCGAAGA AAAAACCCGA ATCATGGTGT ATCGCAGTAT TCCACAGTGG 
AACTGGATTG TTGCTGGCAC AGTGAGTAAA GAAAGCCTCA TGGCTGAGAT TAATCACACT 
CGTAACCTGT TTTTAGGTGG CGGTATTATT CTGGTTCTGC TCTTCGCCGC ATTCTTTGTC 
GTGCTGACGC GCAAATGGCT AAGCCAGCCG CTCGTTGAAA TCGTCAAAGT GGCGGAACAG 
TTTTCTGCCG GTAACCTGAC GGCGACGCTT TCCAGCAACC GTTACGACGA AGTGGGTCGG 
CTGATCGATG CCATTAACGG CATCGGACAA GGGCTAACGA CGATTGTGTC ACAGGTCAGA 
AATGCATCCG AAGAAATCAG TGCCAGCACC GATGCACTGG CTGCCGATAG CGAGAACATC 
AGCGAGCAGA TTGCCCGTCA GGCCAGCAGC GTCGAGGAGA CGTCTGCCAG CATGGAGCAG 
CTCTCCGCCA GCGTGAAGCA GAACGCCGAT AACGTCTCCG CCGCCAAAGA TCTGGCAGAG 
CAGAGCGCCG CAGCGGCACG TAGCGGTAGC CAGACCGTCA CCGACTCCGT TTCTACGATG 
AGCGACATCA AGAACTCCTC GCAGCGAATT GCTGATATCA CGACGGTGAT CGAATCTATC 
GCTTTCCAGA CCAACATTCT GGCGCTGAAT GCGGCGGTTG AAGCCGCGCG TGCAGGTGAA 
CACGGCAGAG GCTTCGCCGT AGTTGCTGCC GAAGTGCGCG CGCTGGCGCA GCGCAGTTCT 
ACCGCGGTGA AAGAGATCGA AACCCTGATT GATGAATCGC TGGAGAAAAT CGAAGCGGGT 
TACCATTTCT CAGAAAAAAC GCAGGCGGTA ATGGACGACT TGCGCAACCG TATCCTCCAA 
GTCAGCACCA TCGTGAACGA TATCGATATC GCCTCACGCG AGCAGTCTGC CGGTATTGGC 
CAGGTGAATA TCGCGATTGT ACAAATTGGT CAGGCAACGC AGGAAAACAC CATTCTGGTC 
AACAACTCGG AAGACACCGC ACAGGGTCTG CGCCAGAAAG GCCACCACCT CAGCGAACTG 
GTCAGCGTAT TTCGAATTTA A 

 

Protein sequence

MLGLSFKHWG LGIKLSIIAS LSVAILFIVF TLTLTRSAGN QLKSLTLNDM QSQVNGVTDM 
INMYDTSLQA EVSNYTRLLA SFLPTQFSLD TVNRTPFGNA SQPTLKAGDT VLNLNTEVPD 
DFLSRTHAIS TIFVRDGEDF TRVTTSLKKE DGSRAMGTKL DRESPAYALV MKGETYSGLA 
TLFGKQYITQ YQPIRDSASK VIGILFVGVD ITKQFTEMQQ TILNKKMGET GHFFVLNTKK 
GKDAGNYLYH QSNANQRPDW SEGALEKVLA TGNGTIEYDN NTMTGEEKTR IMVYRSIPQW 
NWIVAGTVSK ESLMAEINHT RNLFLGGGII LVLLFAAFFV VLTRKWLSQP LVEIVKVAEQ 
FSAGNLTATL SSNRYDEVGR LIDAINGIGQ GLTTIVSQVR NASEEISAST DALAADSENI 
SEQIARQASS VEETSASMEQ LSASVKQNAD NVSAAKDLAE QSAAAARSGS QTVTDSVSTM 
SDIKNSSQRI ADITTVIESI AFQTNILALN AAVEAARAGE HGRGFAVVAA EVRALAQRSS 
TAVKEIETLI DESLEKIEAG YHFSEKTQAV MDDLRNRILQ VSTIVNDIDI ASREQSAGIG 
QVNIAIVQIG QATQENTILV NNSEDTAQGL RQKGHHLSEL VSVFRI