Gene Bcen2424_4296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4296 
Symbol 
ID4452319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1238232 
End bp1240214 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content71% 
IMG OID639696353 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_837924 
Protein GI116692391 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATGA CCCAATTGGG CCGAGTGAGC GTCGGCGCGC GTCTGGCCGC GCTGGCGTGC 
GCGCTCGTCG CCCTGCTGTT TACCGTGTTC GCGTGGACCC TCGCCCATTT CGCCGGCCAG
CAGCTCGCCG ATGAAGCGCA TAAGCGGATC GACGACAAGG AGCAGTCGAT CCGCGCGATG
GTCGACCTGT TCGACAAGGC GTTGACCGCC GAAGCCAACC GCTCGATGTC GCTGTTCGCG
AGTTTCCTGC CGGCCGATTT CTCGCTCGAC CCGGCGCGCA CCGTCGACAT CGGCGGCGTG
GCCGCGCCGA CCCTGCTCGC GGGCGGCCAG CCGCTCGACC TCGACTACTC GATTCCCGAC
CAGTTCCTGA AGAAAAGCGG CGCGATCGCG ACGATCTTCG CGCGCGACGG CGACGATTTC
GTGCGCATCA CGACGTCGCT GAAGAAGCAG GACGGCGCGC GCGCCGTCGG CACCAAGCTC
GACCGCGCCG GCCCCGCGTA TGCGCCGCTG GTCGCCGGGC GCAGCTACAC GGGCCTCGCG
AAGCTGTTCG GCCGGTCGTA CATCACGCAG TACAAGCCGG TGACCGACGC GACCGGCCGC
GTGATCGGCG CGCTGTTCGT CGGCCTCGAC ATCGGCGCCG AGCTCAAGCT CGTCGAGGAC
GGCATCCGTG CGCTGAAGAT CGGCGACAAC GGCTACTACT TCGTGCTCGA TGCGTCGCAA
GGCCCGTCGC GCGGCACCTT CGTCGTGCAT CCCGATGCGG CCGGCCAGCG TGCCGACGAC
ACGCGCGCCC CCTACGCGCA GATGCTCGCG GCGGCCCAGG GCCGGCTCGC GTATACGTCG
ACCGACCCGG CCGCGCACGA CGCCGGGCCG ACCGCGAAAT TCGTGTCGTT CACGACGATT
CCGCAGTGGC AATGGCTCGT CGGCGGGATC GCGCTCGACG ACGAGCTGCT GGCCACCATG
CGCGCCACCC GCAACCGCTT CCTGATGATC GGCGCCGTGC TCGTCGCAGC GTTCGCGACG
CTGTTCGTCA TCGTCGTGCG GCGCGTGGTG AGCCGGCCGC TGGAAGCCGC CGCCCGCGCG
TCCGAGCGCT ATGCGGCGGG CGATCTCAGC GTGCGCATCC GCGACGGCGC GGCCGCGCAC
GGCAGCGCGG GCAACGACGA GATCGGCCGG CTCGTGCAGG CGGTCGACGG GATCGGCGAC
GGCCTCGCGC GGATCGTCGC GCAAGTGCGC AACGGCGCGG CCGACATCGC GCACGGCACG
GTCGGCATCG CGGCCGGCAG CAGCGACATC GCCGCGCGGA TCGCGACGCA GGCCAGCAGC
GTCGAACAGA CGGCCGCCAG CATGGAGCAG ATCACCGCCG CCGTGCAGCA GAGCGCCGAG
CATGCGGCGC AAGCCAACGC GCTGGTCGCG GATGCGTCGG CCGCCGCGAC GAACGGCGAC
GCCGCGGTGC AGCGCGTGGT CGCGACGATG GACGACATCG GCCGCGCGAC GCGCCGGATC
GCCGAGATCA CCGGCGCGAT CGAAGGCATC GCGTTCCAGA CCAACATCCT CGCGCTGAAC
GCGGCCGTCG AGGCCGCCCG CGCGGGCGAA CACGGCAAGG GCTTCGCGGT GGTCGCGGCC
GAGGTGCGCG CGCTCGCGCA GCGCAGCGCC GCCGCGGTCA AGGAGATCGA CGCGCTGAGC
GCCGAATCGT CGACGACGGT CGAACAGGGT TACCGGATCG CGGACGCCGC GCGCGGCACG
ATGCGCGACA TCGTCGCGCG GGTCGACCAG GTGCGCACGC TGATCGGCGA GATCAGCGCC
GCGTCGCGCG AACAATCGAC CGGCATCGAG CAGGTGAATC TGGCCGTCAC GCAGATCGGC
GAAGCAACGC AGCAGAATGC GCTGCTGATC TCGGACGCCG AGCGCGCGGC CGTCGCGTTG
CGCGAGCAGG CCGCGCAACT GTCGGACGCG GTCAGCGTGT TCCGGCTCGC ACGCGACGCG
TGA
 
Protein sequence
MRMTQLGRVS VGARLAALAC ALVALLFTVF AWTLAHFAGQ QLADEAHKRI DDKEQSIRAM 
VDLFDKALTA EANRSMSLFA SFLPADFSLD PARTVDIGGV AAPTLLAGGQ PLDLDYSIPD
QFLKKSGAIA TIFARDGDDF VRITTSLKKQ DGARAVGTKL DRAGPAYAPL VAGRSYTGLA
KLFGRSYITQ YKPVTDATGR VIGALFVGLD IGAELKLVED GIRALKIGDN GYYFVLDASQ
GPSRGTFVVH PDAAGQRADD TRAPYAQMLA AAQGRLAYTS TDPAAHDAGP TAKFVSFTTI
PQWQWLVGGI ALDDELLATM RATRNRFLMI GAVLVAAFAT LFVIVVRRVV SRPLEAAARA
SERYAAGDLS VRIRDGAAAH GSAGNDEIGR LVQAVDGIGD GLARIVAQVR NGAADIAHGT
VGIAAGSSDI AARIATQASS VEQTAASMEQ ITAAVQQSAE HAAQANALVA DASAAATNGD
AAVQRVVATM DDIGRATRRI AEITGAIEGI AFQTNILALN AAVEAARAGE HGKGFAVVAA
EVRALAQRSA AAVKEIDALS AESSTTVEQG YRIADAARGT MRDIVARVDQ VRTLIGEISA
ASREQSTGIE QVNLAVTQIG EATQQNALLI SDAERAAVAL REQAAQLSDA VSVFRLARDA