| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0933 |
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| Symbol | |
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| ID | 8418753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1104222 |
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| End bp | 1106564 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645037503 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_003197802 |
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| Protein GI | 258405060 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.156704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGT TGAGCTTGGG GAAAAAAATA TTTTTCGGCT TCAGTCTCGT TCTCGCGTTG
GCCGTCATTT TAGGCGCCGT CGGCGTTGTC AAGATGAACC AAGCAGAAAA TGGAGCCCGC
ACCCTGGCTA CTGAATTCGT TCCGGAAGTG GACATATCGG CTCAGTTGCG CGGCGCGACA
AACCGCGCCA TGTATGCCAT GCGTGGCTTC AGCCTGACTG GAAAAGAGGA ATTTCAGCAA
AACGCCAAAG AAGAATTGGC CAACGTGCAG ACTGGCATCT CCAAAGCAGA AAAACTCCAC
CAGAATGCTG AAAATTTGAA AGCCCTTGAA AAGCATATAG CGGAATTGAA CTCCGGGAAA
AAAGAGTACG ATGAACTGGT TGCTACCACC GCTAACCTGA ACACAAAGAT GGAATCGCTA
CGGAATTCGC TGGACACCAA CGCTAATGCC TATATGCAAA AATCCAGTGA ATTCCTTGAA
GGGCAAAATG CAAAATTCAA GACTGATCTC AAGGAACGCA TCGAGAAAAT CGACACGGTG
ACCCAGATCG TGGCCGCAGC CAACGAGGCC CGGGTGCTCA ATTTCAAGGC CAAGGCCCGC
GGCGAGTTTG CCCTTATGGG TAAGGCGCAG GACCGGCTGC AAAAGATCCA GGAACTCGTC
CAGTCCATCC GGGACATTAC CCGCGACGCC GAGGATATTG CAAGCTTGGA CGCCATCCGG
GAGGCCAGCC AGAACTACGG CAGCGCTATG CGTAGCGGTG GCTCCCAGGC TGACAACCAA
GCCCTGGCAC AGACCATGGA CCAAAATGCG GCAGCCCTTA TGGACGCAGC CAACGGGTTT
CTGGCCACTC AGCAGGGCAA ACTGGCCACA GACATGACGC AGCGTCTCAC CAAAATAACC
CTTGCGAATG ACATTATCGA CCTTGGCAGT GACAGCCGGG TCAAAAACTT CAAAGCTCAG
GCCCTTCGTG AACCCGCACT TCTAGAAAAA GCGATGGGAA ATTTCCAAGC TGTGAATGAA
AAGTTTGAGA AAATTCGAAA AGTCACTTTT CTGGATCAAG ATATAAAACG ATTGGATACC
GTTCAGCAGG CTGGAAACGA CTATAAAACA GCCATGGCCG GATTGCTGAC GACATGGCGC
AATCTGCAAT CAGTTGATGT ACAACGAGAC AAAACAGGCA AAGAATTCAT TGCTGTAACC
CGCAACCTGG CAGATGCTGG ATTGGACAAC ACGCAGCAAA TTGCTGATGC TTCAATGGCC
AATCTGTCAA TGGCCTCAAC GATCATGCTG GTGGGTCTGG GTGTGACGAT TGTTTTGGGG
CTATTTATTG CCTGGTTTAT GACCGGATCT ATCACCAAGC CGGTTATAAA AATAATTGAA
AGCCTCTCCA CAAACGCCGA GCATGTGACT TCAGCCGCGA ATCAGGTTTC CTCAGCTGGT
CAGTCACTGG CAGAAGGGTC CAGTGAGCAA GCCTCAAGCC TTGAAGAAAG CTCCTCTTCT
TTAGAGGAGA TGGCGTCCAT GACCAAACAA AACGCTGAAA ATGCCCAACA AGCCGACCAG
GGCATGGTTG AAACCGTCAC AGTGGTGGAT TCCGGCGTCA AAGCTATGGA GCAGATGCAG
CAGGCTATCG AAGATATCAG AAATTCTGCC GCCGAGACTT CCAAAATCAT GAAAACGATT
GATGACATTG CTTTTCAGAC CAATTTGCTG GCCCTCAATG CTGCAGTGGA GGCGGCTCGA
GCAGGTGAAG CAGGAAAGGG GTTTGCGGTT GTTGCAGAAG AGGTGAGAAG TCTCGCCCAG
CGGAGCGCAG AAGCTGCCCA GAACACCTCT GACCTTATCG AACAGTCGCA GACGCGAGCC
GAGAATGGCG TGCAGGTTTC CGAACAGGTC GCCGGATATT TGAATGATAT CAAGCAACAT
GCTGAAAAAA TGAAGACATT CGTCGGCGAA ATTTCAGCAG CGTCAAAAGA ACAAGAGCAG
GGTATTGAGC AGGTCAACAC GGCTGTGGCC GAAATGGACA AAGTGGTCCA GCAAAATGCC
TCTGATTCAG AAGAATCCGC GAGTGCTGCA GAGGAACTCT CCGCCCAGGC CGAAGAACAA
ATGCACACCG TGCAGACCTT GTCGCAACTG ATCTACGGGG GAGCGCATAG TGGTGCCACA
TATAGACACA AACAGCCCAG CGAAAGCAAG CAAAACTCTG CTGCTTCCAC CAGGCTGTCA
GCATTGGCCT CTGGCCAAGG ACAATCAAAG AACCGTCCCC AACAAGAGCC CTCGAAAAAC
GAAGCATATC AAAACCCCGA ATCTGTTATT CCCTTAGAAA ATGATGATTT CAAAGATTTT
TAA
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| Protein sequence | MQQLSLGKKI FFGFSLVLAL AVILGAVGVV KMNQAENGAR TLATEFVPEV DISAQLRGAT
NRAMYAMRGF SLTGKEEFQQ NAKEELANVQ TGISKAEKLH QNAENLKALE KHIAELNSGK
KEYDELVATT ANLNTKMESL RNSLDTNANA YMQKSSEFLE GQNAKFKTDL KERIEKIDTV
TQIVAAANEA RVLNFKAKAR GEFALMGKAQ DRLQKIQELV QSIRDITRDA EDIASLDAIR
EASQNYGSAM RSGGSQADNQ ALAQTMDQNA AALMDAANGF LATQQGKLAT DMTQRLTKIT
LANDIIDLGS DSRVKNFKAQ ALREPALLEK AMGNFQAVNE KFEKIRKVTF LDQDIKRLDT
VQQAGNDYKT AMAGLLTTWR NLQSVDVQRD KTGKEFIAVT RNLADAGLDN TQQIADASMA
NLSMASTIML VGLGVTIVLG LFIAWFMTGS ITKPVIKIIE SLSTNAEHVT SAANQVSSAG
QSLAEGSSEQ ASSLEESSSS LEEMASMTKQ NAENAQQADQ GMVETVTVVD SGVKAMEQMQ
QAIEDIRNSA AETSKIMKTI DDIAFQTNLL ALNAAVEAAR AGEAGKGFAV VAEEVRSLAQ
RSAEAAQNTS DLIEQSQTRA ENGVQVSEQV AGYLNDIKQH AEKMKTFVGE ISAASKEQEQ
GIEQVNTAVA EMDKVVQQNA SDSEESASAA EELSAQAEEQ MHTVQTLSQL IYGGAHSGAT
YRHKQPSESK QNSAASTRLS ALASGQGQSK NRPQQEPSKN EAYQNPESVI PLENDDFKDF
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