More than 300 homologs were found in PanDaTox collection
for query gene Krad_1217 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_1217  methyl-accepting chemotaxis sensory transducer  100 
 
 
710 aa  1373    Kineococcus radiotolerans SRS30216  Bacteria  normal  0.142887  normal  0.0205131 
 
 
-
 
NC_013521  Sked_20550  methyl-accepting chemotaxis protein  46.67 
 
 
733 aa  514  1e-144  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.375054  normal  0.44591 
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  38.26 
 
 
702 aa  386  1e-106  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  36.81 
 
 
715 aa  380  1e-104  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_013223  Dret_0342  methyl-accepting chemotaxis sensory transducer  32.2 
 
 
699 aa  305  3.0000000000000004e-81  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_2373  methyl-accepting chemotaxis sensory transducer  29.93 
 
 
718 aa  275  2.0000000000000002e-72  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1336  putative methyl-accepting chemotaxis protein (MCP)  29.54 
 
 
740 aa  263  6e-69  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000730785  n/a   
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  30.56 
 
 
686 aa  247  6.999999999999999e-64  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2467  putative methyl-accepting chemotaxis protein (MCP)  27.13 
 
 
729 aa  223  7e-57  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3699  histidine kinase  28.87 
 
 
998 aa  200  6e-50  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_36620  methyl-accepting chemotaxis protein  43.53 
 
 
543 aa  196  1e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0835028  normal  0.811978 
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  41.37 
 
 
540 aa  192  2.9999999999999997e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1613  methyl-accepting chemotaxis sensory transducer  44.56 
 
 
523 aa  190  7e-47  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00385179  normal 
 
 
-
 
NC_007604  Synpcc7942_1816  periplasmic sensor hybrid histidine kinase  30.06 
 
 
977 aa  188  3e-46  Synechococcus elongatus PCC 7942  Bacteria  normal  0.218789  normal  0.39116 
 
 
-
 
NC_007498  Pcar_1077  sensory box/GGDEF family protein  29.78 
 
 
808 aa  186  1.0000000000000001e-45  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3046  putative PAS/PAC sensor protein  36 
 
 
660 aa  184  5.0000000000000004e-45  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  42.9 
 
 
538 aa  183  8.000000000000001e-45  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_008699  Noca_1293  chemotaxis sensory transducer  34.52 
 
 
542 aa  180  7e-44  Nocardioides sp. JS614  Bacteria  normal  0.320257  n/a   
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  39.69 
 
 
545 aa  179  2e-43  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  44.06 
 
 
538 aa  176  9e-43  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  40.13 
 
 
540 aa  176  9.999999999999999e-43  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_013093  Amir_0199  methyl-accepting chemotaxis sensory transducer  39.68 
 
 
532 aa  175  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  0.570256  n/a   
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  42.58 
 
 
538 aa  175  2.9999999999999996e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1961  methyl-accepting chemotaxis sensory transducer  38.84 
 
 
535 aa  172  2e-41  Jonesia denitrificans DSM 20603  Bacteria  normal  0.286616  normal 
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  42.21 
 
 
1150 aa  170  7e-41  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  42.59 
 
 
536 aa  170  8e-41  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
NC_013521  Sked_07600  methyl-accepting chemotaxis protein  42.48 
 
 
533 aa  170  1e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0696595 
 
 
-
 
NC_013521  Sked_30970  methyl-accepting chemotaxis protein  36.54 
 
 
562 aa  169  1e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  43.82 
 
 
533 aa  170  1e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  41.25 
 
 
522 aa  168  2.9999999999999998e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
545 aa  167  5.9999999999999996e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  39.04 
 
 
518 aa  167  5.9999999999999996e-40  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  41.61 
 
 
528 aa  165  2.0000000000000002e-39  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  40.19 
 
 
535 aa  165  2.0000000000000002e-39  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  40.71 
 
 
538 aa  164  6e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_009664  Krad_0651  methyl-accepting chemotaxis sensory transducer  43.08 
 
 
535 aa  163  1e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.406234  normal  0.0260089 
 
 
-
 
NC_013521  Sked_30940  methyl-accepting chemotaxis protein  38.05 
 
 
407 aa  162  2e-38  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682285  normal 
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  41.26 
 
 
537 aa  162  2e-38  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
542 aa  162  2e-38  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  42.05 
 
 
547 aa  162  2e-38  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_1755  methyl-accepting chemotaxis sensory transducer  40.13 
 
 
538 aa  161  4e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  28.37 
 
 
719 aa  161  5e-38  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0375  methyl-accepting chemotaxis sensory transducer  40.5 
 
 
544 aa  160  8e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  36.16 
 
 
904 aa  159  2e-37  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_009664  Krad_0049  methyl-accepting chemotaxis sensory transducer  45.94 
 
 
539 aa  158  3e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0550535  normal  0.228084 
 
 
-
 
NC_009664  Krad_1913  methyl-accepting chemotaxis sensory transducer  39.34 
 
 
524 aa  157  9e-37  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0934644  normal 
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  36.06 
 
 
531 aa  156  1e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5515  chemotaxis sensory transducer  28.76 
 
 
658 aa  156  2e-36  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.501051  normal  0.584272 
 
 
-
 
NC_010086  Bmul_4309  methyl-accepting chemotaxis sensory transducer  29.63 
 
 
659 aa  155  2.9999999999999998e-36  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.226298 
 
 
-
 
NC_013521  Sked_30950  methyl-accepting chemotaxis protein  37.36 
 
 
540 aa  154  5.9999999999999996e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.664181  normal 
 
 
-
 
NC_013521  Sked_03110  methyl-accepting chemotaxis protein  39.1 
 
 
347 aa  153  8e-36  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0123169  normal 
 
 
-
 
NC_009664  Krad_4077  methyl-accepting chemotaxis sensory transducer  39.88 
 
 
545 aa  152  2e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_5008  methyl-accepting chemotaxis sensory transducer  41.64 
 
 
546 aa  152  2e-35  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0071  histidine kinase, HAMP region: chemotaxis sensory transducer  27.23 
 
 
658 aa  151  3e-35  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  36.47 
 
 
394 aa  151  4e-35  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0421  methyl-accepting chemotaxis sensory transducer  39.3 
 
 
623 aa  151  5e-35  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.308823 
 
 
-
 
NC_004578  PSPTO_0117  methyl-accepting chemotaxis protein  27.59 
 
 
658 aa  150  6e-35  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3089  methyl-accepting chemotaxis sensory transducer  37.35 
 
 
526 aa  149  1.0000000000000001e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.42 
 
 
533 aa  149  1.0000000000000001e-34  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  37.85 
 
 
858 aa  149  2.0000000000000003e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_009654  Mmwyl1_1385  methyl-accepting chemotaxis sensory transducer  25.95 
 
 
683 aa  148  3e-34  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  38.13 
 
 
686 aa  148  3e-34  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1606  methyl-accepting chemotaxis sensory transducer  41.25 
 
 
545 aa  148  4.0000000000000006e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0156977  normal 
 
 
-
 
NC_013124  Afer_0753  methyl-accepting chemotaxis sensory transducer  43.9 
 
 
558 aa  147  5e-34  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.75846  n/a   
 
 
-
 
NC_009664  Krad_4271  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
535 aa  147  6e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.79817  normal  0.653673 
 
 
-
 
NC_009664  Krad_1935  methyl-accepting chemotaxis sensory transducer  45.33 
 
 
530 aa  147  6e-34  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.376441  normal 
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  30.87 
 
 
561 aa  147  8.000000000000001e-34  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  39.53 
 
 
965 aa  147  8.000000000000001e-34  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_007643  Rru_A1160  chemotaxis sensory transducer  31.99 
 
 
559 aa  147  9e-34  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  27.79 
 
 
730 aa  146  1e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2460  chemotaxis sensory transducer  30.69 
 
 
565 aa  145  2e-33  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  35.69 
 
 
577 aa  146  2e-33  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2460  methyl-accepting chemotaxis sensory transducer  40.76 
 
 
531 aa  145  3e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1064  methyl-accepting chemotaxis sensory transducer  32.02 
 
 
573 aa  145  3e-33  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.223413  n/a   
 
 
-
 
NC_008578  Acel_0127  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
397 aa  144  6e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  0.362921  normal 
 
 
-
 
NC_009664  Krad_1914  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
550 aa  144  7e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.37871  normal 
 
 
-
 
NC_009664  Krad_1002  methyl-accepting chemotaxis sensory transducer  43.03 
 
 
529 aa  143  9.999999999999999e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  hitchhiker  0.00624598 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  31.15 
 
 
573 aa  143  9.999999999999999e-33  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_013173  Dbac_1510  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.17 
 
 
574 aa  143  9.999999999999999e-33  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00534894  n/a   
 
 
-
 
NC_013521  Sked_32360  methyl-accepting chemotaxis protein  39.46 
 
 
530 aa  142  1.9999999999999998e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_3066  methyl-accepting chemotaxis sensory transducer  28.44 
 
 
662 aa  142  1.9999999999999998e-32  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4789  methyl-accepting chemotaxis sensory transducer  42.21 
 
 
493 aa  142  1.9999999999999998e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0749  methyl-accepting chemotaxis sensory transducer  24.66 
 
 
657 aa  142  1.9999999999999998e-32  Thermosipho melanesiensis BI429  Bacteria  normal  0.388814  n/a   
 
 
-
 
NC_013521  Sked_30960  methyl-accepting chemotaxis protein  39.66 
 
 
540 aa  141  3e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3412  methyl-accepting chemotaxis sensory transducer  28.18 
 
 
662 aa  142  3e-32  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  33.09 
 
 
688 aa  141  3e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_010506  Swoo_1568  methyl-accepting chemotaxis sensory transducer  26.94 
 
 
667 aa  142  3e-32  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_0366  methyl-accepting chemotaxis sensory transducer  25.19 
 
 
643 aa  142  3e-32  Enterobacter sp. 638  Bacteria  normal  normal  0.0151066 
 
 
-
 
NC_010623  Bphy_4315  methyl-accepting chemotaxis sensory transducer  29.76 
 
 
656 aa  141  3.9999999999999997e-32  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30920  methyl-accepting chemotaxis protein  41.1 
 
 
583 aa  141  3.9999999999999997e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  33.9 
 
 
561 aa  141  3.9999999999999997e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  43.96 
 
 
681 aa  141  4.999999999999999e-32  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1148  methyl-accepting chemotaxis sensory transducer with Cache sensor  33.54 
 
 
650 aa  140  6e-32  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.605213  n/a   
 
 
-
 
NC_007925  RPC_4527  methyl-accepting chemotaxis sensory transducer  38.19 
 
 
667 aa  140  6e-32  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.527831 
 
 
-
 
NC_012912  Dd1591_0772  methyl-accepting chemotaxis sensory transducer  28.27 
 
 
646 aa  140  7e-32  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00540264  n/a   
 
 
-
 
NC_003295  RSc3136  putative methyl-accepting chemotaxis transmembrane protein  27.95 
 
 
661 aa  140  7.999999999999999e-32  Ralstonia solanacearum GMI1000  Bacteria  normal  0.598743  normal 
 
 
-
 
NC_013173  Dbac_1511  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.26 
 
 
574 aa  140  7.999999999999999e-32  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0260271  n/a   
 
 
-
 
NC_013512  Sdel_0631  chemotaxis sensory transducer  27.5 
 
 
656 aa  140  7.999999999999999e-32  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00821954  n/a   
 
 
-
 
NC_013174  Jden_0360  methyl-accepting chemotaxis sensory transducer  35.36 
 
 
544 aa  139  1e-31  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0724  methyl-accepting chemotaxis sensory transducer  31.23 
 
 
558 aa  139  2e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>