Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5515 |
Symbol | |
ID | 3713781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6180952 |
End bp | 6182928 |
Gene Length | 1977 bp |
Protein Length | 658 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | chemotaxis sensory transducer |
Protein accession | YP_351243 |
Protein GI | 77461736 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.501051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.584272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAC CTCGCGCTCG GATCGCCTCG CAGCTGGGCC TCGCGCTCGC CGTGATACTG GCGATAGTCA TCAGCGGCAG TACGGTGTTC GCCCTGCGTT CGCTGGATAC CGCCAACCTC GCCACCCGTG AAGAACACCT GGCCAGCGAG GCACGCCTGC TCGCCGATCA GTTGAGCACT TTCCACGGCA CGCTGCGTGA AAGCACCCAG CGCCTGAGCG GGCTGTTCGA GAAACGCTTC AGCGCCGGCC TGAGCATTCA TCCGAGCGAG CCGGTCAACG TCGCCGGCAC CCAGGCCCCG GGCCTGCACC TGGGCAGCGA AGTGTTGAAC AACAACTTCA AGGAAGTCGA CGAGTTCAAA CAGATGACGG CGGGTGTCGC CACGCTGTTC GTGCGCAGCG GCGAAGACTT CATCCGCGTC AGCACCTCGC TGACCAAACA GGATGGCACT CGCGCCATCG GCACCGTGCT CGATCACGCC CACCCGGCCT ACGCGAAGTT GATGGCAGGG CAGGGCTACG TCGGTCGTGC TCTGCTGTTC GATCGCTCCT ACATGACCCA ATACACCCCG GTGCGTGACA GCAGCGGCAA GGTGATTGCG GTGTTGTTCG TCGGCTTCGA TTACACCGAC GCGCAGAACG CCCAGTTCGA CAACCTCAAG CGCTTCCGCA TCGGCCAGAC CGGTTCGCTG GCATTGCTGG ACGAGAAAAA CCAATGGCTG GTGGCGCCGG CGGGCGTGCA GGCGCTGGAT CAAGCGATTC CTGTGGTCAA CGATTTGGCG AAGGCGCCGG GTAAAGGCCG GTTCTGGAGC GACAAGTCCG AAGATTTCTA CAGCATTGCC GTGCCTTTCG AAGGCGGCCC GTGGTCGGTG GTGGCGAGCA TGCCGAAGGC TGAGATCCGC GCGGTGACCT GGAGCGTCGG CACTCAGCTG GCCATCGGCA GTCTGCTGGC GATGTTGCTG GCGGTCGGTT CCGTGGTCTG GTTGCTGCGC AGCAAACTGG CGCCGCTGGG CGATCTGGTC CGTCAGGCCG AAGCCTTGGG CGCCGGTGAT CTGAGTGTGC GTCTGAACGT GTCGAGCAAT GACGAAATCG GCCAACTGGC CCGTGCGTTC AACCAGATGA GCCAGGCCTT GTCGACCATG GTCGAGCACA TCCGCCGCGC CTCGGAAGAG GTCAACCGTC GGGCTCAAGC GCTGTCCGGT CTGTCTGGCG GCGCCTATGA AGGCATGGAG CAACAGTCTG GCGAAATTAC CAGCATGGCC GGTGCGGTTG AAGAGTTCTC CGCCACGTCG CTGAACATTG CCGACAACAT GGGCAACACC CAGCGTCTGG CTCAGGAAAA TGCCCAGCAG ACCCAGATCG GTCGCACCTC GATGGAAGAA GCATCTTCCT CGCTGGAGCA GATTGCCGGT GCGCTGAACA CCACCGCGAC CGTGATCAAC ACCCTGGGTC AGCGCTCCCA GGAAATCGGC GGCATCGTCA GCGTGATTAC CTCGATTGCC GAACAGACCA ACCTGCTGGC ACTCAACGCT GCCATCGAAG CGGCCCGTGC CGGCGAGCAG GGTCGCGGCT TTGCCGTGGT GGCCGACGAG GTGCGCAGCC TGGCCTCGCG TACCCGTCAG GCGACGGATG AAATTTCCAG CATGATTCAC AGTATTCAGC AGGAAACCGG CAACGCCATC AGCAACATGG AGCAGGGCAA CCTGCTGATG CAGGAAGGCC TGTCGCGCAA CGCCAACGTC GCTTCGGCGC TGGCGCGGAT CGATGAGCAG AGCCGTTCGG CAGGCCAGCA GTTTGCGGCG ATTACCACCG CGACCCAGGA ACAGAGCAGT ACCGCGACGC TGTTGAGCAG CAACCTGCAA AGCATCGCGA TGGCCAACAG CGAGCAGCGC GAAGTGGTAT CGAACCTGGC AATCACCGCC AAGGAACTGG AAGGCCTGGC AGCCGACCTG CGCCAGGAAG TCGACCGCTT CCGTTGA
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Protein sequence | MSQPRARIAS QLGLALAVIL AIVISGSTVF ALRSLDTANL ATREEHLASE ARLLADQLST FHGTLRESTQ RLSGLFEKRF SAGLSIHPSE PVNVAGTQAP GLHLGSEVLN NNFKEVDEFK QMTAGVATLF VRSGEDFIRV STSLTKQDGT RAIGTVLDHA HPAYAKLMAG QGYVGRALLF DRSYMTQYTP VRDSSGKVIA VLFVGFDYTD AQNAQFDNLK RFRIGQTGSL ALLDEKNQWL VAPAGVQALD QAIPVVNDLA KAPGKGRFWS DKSEDFYSIA VPFEGGPWSV VASMPKAEIR AVTWSVGTQL AIGSLLAMLL AVGSVVWLLR SKLAPLGDLV RQAEALGAGD LSVRLNVSSN DEIGQLARAF NQMSQALSTM VEHIRRASEE VNRRAQALSG LSGGAYEGME QQSGEITSMA GAVEEFSATS LNIADNMGNT QRLAQENAQQ TQIGRTSMEE ASSSLEQIAG ALNTTATVIN TLGQRSQEIG GIVSVITSIA EQTNLLALNA AIEAARAGEQ GRGFAVVADE VRSLASRTRQ ATDEISSMIH SIQQETGNAI SNMEQGNLLM QEGLSRNANV ASALARIDEQ SRSAGQQFAA ITTATQEQSS TATLLSSNLQ SIAMANSEQR EVVSNLAITA KELEGLAADL RQEVDRFR
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