| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_1974 |
|---|
| Symbol | |
|---|
| ID | 4598286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 2103474 |
|---|
| End bp | 2105081 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 639776574 |
|---|
| Product | chemotaxis sensory transducer |
|---|
| Protein accession | YP_923171 |
|---|
| Protein GI | 119716206 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTCG CCCCGCCCCG CCTGCGCTCC CTCCCCCGAT TCGTCGACCG GTCGATCCGC
ACCCGCGTGC TCAGCATCGT CGGCGTCGTG GCCGCGGTCG TGCTCGCCCT CGGCGGGTAC
GCCGCCCACC TGATCGGGTC CGGCGCCGAC CGTGGCGACG TGCTGATGCG CGCGAACACG
GCCACCGGGG CTGCGCTGCA GGCCGACATG ATGCACGACG CGATCCGCAG CGACGTGCTC
CAGGTGCTCG GCAACCCCGA CGACCCCGGC GCCCGCCTCT CGGCCGCCGC GGACCTGGAG
CAGCACGCTG CGGCGCTGCA GGACAGCCTC GACGAGGTGC GCGCCGCGCA CCTGGGCGCG
GACGTCGACC GGGCCCTCGC CGACGCCACC CCGATCGTCG AGGTGTACCT GACGGCCGCG
TCCTCCTGGA TGACGACGGC GGAGGAGGAC CCGGCCCGGG CGCGCGCGGC GTACCCCTCG
TTCCTGCAGG CCTTCCACAC CCTCGAGGAC ACCCTGCCCG TGGTCACCGA CGCGGTCGCG
CAGCACGCGG TCGCCGCCCA GCAGGGCGTC GAGGCGCAGC GGGGCGCCGT CACCCGGCTG
CTGGTCGGTG CGTCGATCGG GCTGGTGGTC GTGCTCGCCC TCGGGCTGCT GCTGACCCGC
TCGCTCGTGC GCCCGCTCGA CCGCGTGCGC GCCGTGCTCG AGGCGCTCGC CGAGGGTGAC
CTCACCCGCC ACGCCGACGT CGACAGCCGC GACGAGCTCG GTCAGATGGC GGCCGCGCTC
GAGCGGGCGA CCGAGCGGCT GCGGGCCACG GTCCGCGACA TCGACCTGGC CGCCCAGGAG
CTCGCCGACT CCTCGGCGGA CCTGTCGCGG GTCTCGGCGC AGATGAGCGA CTCCGCCTCC
GGGTCCGCGG CCAGCGCGCT GCAGGTGTCC ACGGCGGCGG GCCAGGTGTC GGAGCACGTG
CACGCCGTCG CGGCGGGCAC CGAGGAGATG TCCGCCTCGA TCCGCGAGAT CGCCCAGAGC
ACCAGCAGTG CCGCGGTGGT CGCCACCGAG GCCGTGACGA TCGCCCAGAG CACCACCGAG
CTCGTCACGC AGCTCGGGGA GTCGTCCACC CAGATCGGCA ACGTGGTCAA GCTGATCTCG
AGCATCGCGG GCCAGACCAA CCTGCTGGCG CTGAACGCGA CCATCGAGGC CGCTCGCGCG
GGGGACGCCG GGAAGGGGTT CGCCGTGGTC GCCGGCGAGG TCAAGGAGCT CGCCGACCAG
ACCGGTTCGG CCACCGAGGA CATCGAGCGC CAGGTCGCGG CGATCCAGCG CGACACCGTG
CGGGCGGCCG ACGCGATCGG CCGCATCTCC GCGGTGATCG ACCAGGTCAA CGACACCCAG
GCGGCGATCG CCTCCGCGAT CGAGCAGCAG ACCGCCACGA GCGCCGAGAT GAGCCACGGC
GTGGCCGAGG CCGCGACCGG CAGCGGGACG ATCGCGCAGA CCATCGACGA GGTGGCCCGA
CTGGCCGGTG ACACCACCGA CGCCTCGAGC GCGACGAGGG CGGCGGCGGA CGGGCTCTCG
GCGGTCTCCA TGCGGATGCG GGGCCTGGTC GGCCAGTTCC GCTACTGA
|
|---|
| Protein sequence | MSLAPPRLRS LPRFVDRSIR TRVLSIVGVV AAVVLALGGY AAHLIGSGAD RGDVLMRANT
ATGAALQADM MHDAIRSDVL QVLGNPDDPG ARLSAAADLE QHAAALQDSL DEVRAAHLGA
DVDRALADAT PIVEVYLTAA SSWMTTAEED PARARAAYPS FLQAFHTLED TLPVVTDAVA
QHAVAAQQGV EAQRGAVTRL LVGASIGLVV VLALGLLLTR SLVRPLDRVR AVLEALAEGD
LTRHADVDSR DELGQMAAAL ERATERLRAT VRDIDLAAQE LADSSADLSR VSAQMSDSAS
GSAASALQVS TAAGQVSEHV HAVAAGTEEM SASIREIAQS TSSAAVVATE AVTIAQSTTE
LVTQLGESST QIGNVVKLIS SIAGQTNLLA LNATIEAARA GDAGKGFAVV AGEVKELADQ
TGSATEDIER QVAAIQRDTV RAADAIGRIS AVIDQVNDTQ AAIASAIEQQ TATSAEMSHG
VAEAATGSGT IAQTIDEVAR LAGDTTDASS ATRAAADGLS AVSMRMRGLV GQFRY
|
|---|
| |