More than 300 homologs were found in PanDaTox collection
for query gene Amir_2323 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  100 
 
 
545 aa  1058    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  45.47 
 
 
545 aa  367  1e-100  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  61.68 
 
 
518 aa  356  5e-97  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_30970  methyl-accepting chemotaxis protein  61.08 
 
 
562 aa  348  2e-94  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  48.64 
 
 
540 aa  343  2.9999999999999997e-93  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  46 
 
 
522 aa  339  9e-92  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  43.58 
 
 
538 aa  334  2e-90  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  62.31 
 
 
533 aa  335  2e-90  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  51.14 
 
 
537 aa  330  6e-89  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0421  methyl-accepting chemotaxis sensory transducer  42.94 
 
 
623 aa  327  2.0000000000000001e-88  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.308823 
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  59.94 
 
 
538 aa  326  6e-88  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  51.81 
 
 
538 aa  323  5e-87  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_30950  methyl-accepting chemotaxis protein  57.64 
 
 
540 aa  322  9.999999999999999e-87  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.664181  normal 
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  50.61 
 
 
542 aa  321  1.9999999999999998e-86  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  56.19 
 
 
394 aa  314  1.9999999999999998e-84  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0375  methyl-accepting chemotaxis sensory transducer  61.39 
 
 
544 aa  315  1.9999999999999998e-84  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_36620  methyl-accepting chemotaxis protein  56.35 
 
 
543 aa  314  2.9999999999999996e-84  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0835028  normal  0.811978 
 
 
-
 
NC_013521  Sked_07600  methyl-accepting chemotaxis protein  45 
 
 
533 aa  313  7.999999999999999e-84  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0696595 
 
 
-
 
NC_008699  Noca_1293  chemotaxis sensory transducer  46.96 
 
 
542 aa  310  5e-83  Nocardioides sp. JS614  Bacteria  normal  0.320257  n/a   
 
 
-
 
NC_013521  Sked_30960  methyl-accepting chemotaxis protein  45.42 
 
 
540 aa  310  5.9999999999999995e-83  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30940  methyl-accepting chemotaxis protein  54.22 
 
 
407 aa  308  2.0000000000000002e-82  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682285  normal 
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  58.18 
 
 
528 aa  308  2.0000000000000002e-82  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  58.23 
 
 
538 aa  308  2.0000000000000002e-82  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  56.76 
 
 
531 aa  303  7.000000000000001e-81  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  53.48 
 
 
904 aa  298  1e-79  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_013757  Gobs_5008  methyl-accepting chemotaxis sensory transducer  61.61 
 
 
546 aa  298  2e-79  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_32360  methyl-accepting chemotaxis protein  44.55 
 
 
530 aa  298  2e-79  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0651  methyl-accepting chemotaxis sensory transducer  43.45 
 
 
535 aa  296  9e-79  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.406234  normal  0.0260089 
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  55.18 
 
 
547 aa  295  2e-78  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03110  methyl-accepting chemotaxis protein  50.87 
 
 
347 aa  294  3e-78  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0123169  normal 
 
 
-
 
NC_013093  Amir_1755  methyl-accepting chemotaxis sensory transducer  56.56 
 
 
538 aa  290  3e-77  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0199  methyl-accepting chemotaxis sensory transducer  46.91 
 
 
532 aa  287  2.9999999999999996e-76  Actinosynnema mirum DSM 43827  Bacteria  normal  0.570256  n/a   
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  52.7 
 
 
858 aa  287  2.9999999999999996e-76  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_009664  Krad_1613  methyl-accepting chemotaxis sensory transducer  49.71 
 
 
523 aa  283  5.000000000000001e-75  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00385179  normal 
 
 
-
 
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  58.86 
 
 
536 aa  283  6.000000000000001e-75  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
NC_013174  Jden_1961  methyl-accepting chemotaxis sensory transducer  53.33 
 
 
535 aa  282  1e-74  Jonesia denitrificans DSM 20603  Bacteria  normal  0.286616  normal 
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  54.22 
 
 
540 aa  276  5e-73  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  42.77 
 
 
1150 aa  275  2.0000000000000002e-72  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  52.38 
 
 
535 aa  272  1e-71  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0360  methyl-accepting chemotaxis sensory transducer  54.55 
 
 
544 aa  263  6e-69  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4077  methyl-accepting chemotaxis sensory transducer  50.75 
 
 
545 aa  261  2e-68  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  48.77 
 
 
702 aa  255  1.0000000000000001e-66  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_013093  Amir_3089  methyl-accepting chemotaxis sensory transducer  38.19 
 
 
526 aa  254  2.0000000000000002e-66  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2460  methyl-accepting chemotaxis sensory transducer  39.7 
 
 
531 aa  250  4e-65  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30920  methyl-accepting chemotaxis protein  52.11 
 
 
583 aa  248  1e-64  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1935  methyl-accepting chemotaxis sensory transducer  51.1 
 
 
530 aa  237  4e-61  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.376441  normal 
 
 
-
 
NC_009664  Krad_1606  methyl-accepting chemotaxis sensory transducer  48.81 
 
 
545 aa  236  6e-61  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0156977  normal 
 
 
-
 
NC_009664  Krad_1914  methyl-accepting chemotaxis sensory transducer  42.16 
 
 
550 aa  235  1.0000000000000001e-60  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.37871  normal 
 
 
-
 
NC_009664  Krad_1002  methyl-accepting chemotaxis sensory transducer  48.73 
 
 
529 aa  234  3e-60  Kineococcus radiotolerans SRS30216  Bacteria  normal  hitchhiker  0.00624598 
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  44.83 
 
 
715 aa  231  2e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_009664  Krad_1913  methyl-accepting chemotaxis sensory transducer  46.83 
 
 
524 aa  228  2e-58  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0934644  normal 
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  50.86 
 
 
965 aa  228  3e-58  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_008578  Acel_0127  methyl-accepting chemotaxis sensory transducer  49.06 
 
 
397 aa  220  3.9999999999999997e-56  Acidothermus cellulolyticus 11B  Bacteria  normal  0.362921  normal 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  42.58 
 
 
741 aa  219  1e-55  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  35.84 
 
 
686 aa  218  2e-55  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3504  methyl-accepting chemotaxis sensory transducer  45.3 
 
 
657 aa  217  4e-55  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.193477  normal 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  35.7 
 
 
656 aa  213  4.9999999999999996e-54  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1064  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
573 aa  213  7.999999999999999e-54  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.223413  n/a   
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  38.59 
 
 
731 aa  211  3e-53  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_013173  Dbac_0250  methyl-accepting chemotaxis sensory transducer  34.64 
 
 
554 aa  210  4e-53  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.000234986  n/a   
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  38.84 
 
 
730 aa  209  1e-52  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  34.88 
 
 
561 aa  208  2e-52  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  39.12 
 
 
566 aa  208  2e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_009664  Krad_0049  methyl-accepting chemotaxis sensory transducer  49.83 
 
 
539 aa  207  3e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0550535  normal  0.228084 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  39 
 
 
688 aa  207  3e-52  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_011004  Rpal_5120  methyl-accepting chemotaxis sensory transducer  36.65 
 
 
563 aa  207  4e-52  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  42.27 
 
 
675 aa  207  4e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  40.16 
 
 
688 aa  207  4e-52  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
567 aa  206  7e-52  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007778  RPB_3610  methyl-accepting chemotaxis sensory transducer  33.22 
 
 
563 aa  206  8e-52  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735593  normal  0.400148 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  41.16 
 
 
730 aa  206  1e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  35.24 
 
 
563 aa  205  2e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  34.34 
 
 
563 aa  204  2e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  40.39 
 
 
566 aa  204  3e-51  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  46.72 
 
 
656 aa  204  3e-51  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.28 
 
 
716 aa  204  3e-51  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1510  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.16 
 
 
574 aa  203  6e-51  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00534894  n/a   
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
688 aa  203  8e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  40 
 
 
670 aa  202  9.999999999999999e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  32.23 
 
 
563 aa  202  9.999999999999999e-51  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  39.73 
 
 
563 aa  201  1.9999999999999998e-50  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  38.92 
 
 
572 aa  202  1.9999999999999998e-50  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_013173  Dbac_1209  methyl-accepting chemotaxis sensory transducer  38.74 
 
 
560 aa  201  3e-50  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0163835  n/a   
 
 
-
 
NC_008699  Noca_1783  chemotaxis sensory transducer  43.2 
 
 
515 aa  200  3.9999999999999996e-50  Nocardioides sp. JS614  Bacteria  normal  0.552405  n/a   
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  31.25 
 
 
714 aa  200  3.9999999999999996e-50  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_013173  Dbac_1511  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.5 
 
 
574 aa  200  5e-50  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0260271  n/a   
 
 
-
 
NC_007958  RPD_0337  chemotaxis sensory transducer  35.6 
 
 
563 aa  199  7.999999999999999e-50  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.760858  normal  0.789667 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  36.98 
 
 
656 aa  199  9e-50  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_007964  Nham_0772  methyl-accepting chemotaxis sensory transducer  32.74 
 
 
561 aa  199  1.0000000000000001e-49  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  39.19 
 
 
697 aa  198  2.0000000000000003e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  50.88 
 
 
655 aa  198  2.0000000000000003e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  43.07 
 
 
586 aa  198  2.0000000000000003e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  36.28 
 
 
562 aa  198  3e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_011004  Rpal_0924  methyl-accepting chemotaxis sensory transducer  42.02 
 
 
712 aa  198  3e-49  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.991242  n/a   
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  40.66 
 
 
563 aa  197  3e-49  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  39.33 
 
 
573 aa  197  4.0000000000000005e-49  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  39.4 
 
 
561 aa  197  5.000000000000001e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  36.4 
 
 
560 aa  197  5.000000000000001e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_007925  RPC_4580  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
563 aa  197  5.000000000000001e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.174371  normal 
 
 
-
 
NC_009664  Krad_4271  methyl-accepting chemotaxis sensory transducer  45.16 
 
 
535 aa  197  5.000000000000001e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.79817  normal  0.653673 
 
 
-
 
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