More than 300 homologs were found in PanDaTox collection
for query gene Krad_3504 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_3504  methyl-accepting chemotaxis sensory transducer  100 
 
 
657 aa  1268    Kineococcus radiotolerans SRS30216  Bacteria  normal  0.193477  normal 
 
 
-
 
NC_010505  Mrad2831_5329  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
691 aa  286  8e-76  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.8679  normal 
 
 
-
 
NC_007643  Rru_A2546  chemotaxis sensory transducer  36.13 
 
 
690 aa  280  7e-74  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  31.51 
 
 
730 aa  278  3e-73  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  32.86 
 
 
741 aa  277  4e-73  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007643  Rru_A0576  methyl-accepting chemotaxis sensory transducer  33.76 
 
 
688 aa  268  2e-70  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  30.81 
 
 
731 aa  268  2e-70  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_013421  Pecwa_0006  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.27 
 
 
667 aa  266  5.999999999999999e-70  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_0007  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.89 
 
 
636 aa  261  3e-68  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_0352  methyl-accepting chemotaxis sensory transducer  29.65 
 
 
649 aa  259  8e-68  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.127099 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  30.8 
 
 
730 aa  258  4e-67  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_012880  Dd703_3926  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.2 
 
 
665 aa  240  5.999999999999999e-62  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  27.22 
 
 
713 aa  238  3e-61  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_007498  Pcar_0585  methyl-accepting chemotaxis protein (MCP)  30.99 
 
 
706 aa  236  8e-61  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000000000132912  n/a   
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  43.29 
 
 
702 aa  236  1.0000000000000001e-60  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_013421  Pecwa_2372  methyl-accepting chemotaxis sensory transducer  28.22 
 
 
657 aa  235  2.0000000000000002e-60  Pectobacterium wasabiae WPP163  Bacteria  normal  0.63052  n/a   
 
 
-
 
NC_009439  Pmen_1998  methyl-accepting chemotaxis sensory transducer  32.87 
 
 
714 aa  235  2.0000000000000002e-60  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0164438 
 
 
-
 
NC_009831  Ssed_3827  methyl-accepting chemotaxis transducer  29.33 
 
 
695 aa  230  6e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000221184 
 
 
-
 
NC_012917  PC1_2086  methyl-accepting chemotaxis sensory transducer  27.97 
 
 
657 aa  228  3e-58  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2217  methyl-accepting chemotaxis sensory transducer  31.76 
 
 
714 aa  227  6e-58  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  45.3 
 
 
545 aa  227  6e-58  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  29.17 
 
 
712 aa  226  1e-57  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_002947  PP_3557  methyl-accepting chemotaxis transducer  31.89 
 
 
714 aa  225  2e-57  Pseudomonas putida KT2440  Bacteria  normal  0.386044  normal 
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  36.42 
 
 
518 aa  225  2e-57  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0221  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.84 
 
 
785 aa  224  4e-57  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  29.04 
 
 
712 aa  224  4.9999999999999996e-57  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  44.41 
 
 
535 aa  223  8e-57  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_29760  putative chemotaxis transducer  31.28 
 
 
714 aa  221  3.9999999999999997e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2546  putative chemotaxis transducer  31.28 
 
 
714 aa  220  6e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  0.410637  n/a   
 
 
-
 
NC_010501  PputW619_2074  methyl-accepting chemotaxis sensory transducer  30.93 
 
 
714 aa  220  7.999999999999999e-56  Pseudomonas putida W619  Bacteria  normal  0.203311  normal 
 
 
-
 
NC_007492  Pfl01_3770  chemotaxis sensory transducer  28.5 
 
 
715 aa  216  9e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  42.18 
 
 
522 aa  214  2.9999999999999995e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1205  chemotaxis sensory transducer  26.67 
 
 
713 aa  214  2.9999999999999995e-54  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2365  methyl-accepting chemotaxis sensory transducer  30.77 
 
 
714 aa  214  3.9999999999999995e-54  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  38.4 
 
 
545 aa  214  3.9999999999999995e-54  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  44.08 
 
 
904 aa  214  4.9999999999999996e-54  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_007498  Pcar_0439  methyl-accepting chemotaxis protein (MCP)  27.69 
 
 
740 aa  211  2e-53  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1755  methyl-accepting chemotaxis sensory transducer  45.22 
 
 
538 aa  211  3e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4943  methyl-accepting chemotaxis sensory transducer  30.94 
 
 
571 aa  210  6e-53  Burkholderia phymatum STM815  Bacteria  normal  0.769292  normal 
 
 
-
 
NC_010501  PputW619_3984  methyl-accepting chemotaxis sensory transducer  30.34 
 
 
688 aa  210  6e-53  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4382  chemotaxis sensory transducer  29.3 
 
 
738 aa  210  8e-53  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.218372 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  27.41 
 
 
716 aa  209  9e-53  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_008699  Noca_1293  chemotaxis sensory transducer  42.18 
 
 
542 aa  209  1e-52  Nocardioides sp. JS614  Bacteria  normal  0.320257  n/a   
 
 
-
 
NC_011883  Ddes_0301  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.67 
 
 
735 aa  209  1e-52  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3295  methyl-accepting chemotaxis sensory transducer  27.15 
 
 
720 aa  209  2e-52  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.0000403269  n/a   
 
 
-
 
NC_013093  Amir_0375  methyl-accepting chemotaxis sensory transducer  43.57 
 
 
544 aa  207  3e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1799  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.71 
 
 
668 aa  206  8e-52  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.481177  n/a   
 
 
-
 
NC_013522  Taci_1730  methyl-accepting chemotaxis sensory transducer with Cache sensor  32.27 
 
 
707 aa  206  9e-52  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.000446671  n/a   
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  42.9 
 
 
538 aa  206  1e-51  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1148  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.97 
 
 
650 aa  206  1e-51  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.605213  n/a   
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  41.07 
 
 
540 aa  206  1e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  42.54 
 
 
547 aa  203  7e-51  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_0124  chemotaxis sensory transducer, Cache sensor  31.69 
 
 
626 aa  203  7e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.201174  normal 
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  42.9 
 
 
531 aa  203  7e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  44.3 
 
 
858 aa  203  8e-51  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  37.94 
 
 
688 aa  203  9.999999999999999e-51  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_007963  Csal_1099  methyl-accepting chemotaxis sensory transducer  28.39 
 
 
699 aa  202  9.999999999999999e-51  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_4190  methyl-accepting chemotaxis sensory transducer  29.15 
 
 
688 aa  202  1.9999999999999998e-50  Pseudomonas putida GB-1  Bacteria  normal  0.251316  normal 
 
 
-
 
NC_002947  PP_1228  methyl-accepting chemotaxis transducer  29.42 
 
 
688 aa  201  3e-50  Pseudomonas putida KT2440  Bacteria  normal  normal  0.739741 
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  42.74 
 
 
538 aa  201  3e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_009512  Pput_1257  methyl-accepting chemotaxis sensory transducer  29 
 
 
688 aa  201  5e-50  Pseudomonas putida F1  Bacteria  normal  0.124474  normal 
 
 
-
 
NC_010501  PputW619_1723  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.59 
 
 
626 aa  200  6e-50  Pseudomonas putida W619  Bacteria  normal  0.372844  normal 
 
 
-
 
NC_009664  Krad_4077  methyl-accepting chemotaxis sensory transducer  43.71 
 
 
545 aa  199  1.0000000000000001e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  41.87 
 
 
533 aa  199  1.0000000000000001e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_007498  Pcar_0972  methyl-accepting chemotaxis protein (MCP)  28.11 
 
 
779 aa  199  2.0000000000000003e-49  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000000412028  n/a   
 
 
-
 
NC_013521  Sked_03110  methyl-accepting chemotaxis protein  41.21 
 
 
347 aa  198  3e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0123169  normal 
 
 
-
 
NC_007519  Dde_3293  methyl-accepting chemotaxis sensory transducer  26.13 
 
 
720 aa  197  3e-49  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.601  n/a   
 
 
-
 
NC_013173  Dbac_1511  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.99 
 
 
574 aa  198  3e-49  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0260271  n/a   
 
 
-
 
NC_013521  Sked_36620  methyl-accepting chemotaxis protein  40.62 
 
 
543 aa  197  4.0000000000000005e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0835028  normal  0.811978 
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  40.73 
 
 
528 aa  197  5.000000000000001e-49  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  30.55 
 
 
643 aa  197  7e-49  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  42.19 
 
 
538 aa  196  8.000000000000001e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_007492  Pfl01_2970  chemotaxis sensory transducer  29.21 
 
 
712 aa  196  9e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3477  putative methyl-accepting chemotaxis protein  30.81 
 
 
622 aa  196  1e-48  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000522984 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  30.66 
 
 
628 aa  196  1e-48  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  44.94 
 
 
536 aa  195  2e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  28.1 
 
 
707 aa  196  2e-48  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  36.76 
 
 
602 aa  194  3e-48  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1510  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.7 
 
 
574 aa  194  4e-48  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00534894  n/a   
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  46.5 
 
 
1150 aa  194  4e-48  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  41.53 
 
 
715 aa  194  5e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_013093  Amir_3089  methyl-accepting chemotaxis sensory transducer  39.65 
 
 
526 aa  193  7e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0199  methyl-accepting chemotaxis sensory transducer  42.63 
 
 
532 aa  193  7e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.570256  n/a   
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  36.62 
 
 
542 aa  193  7e-48  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_56000  chemotactic transducer PctA  30.97 
 
 
629 aa  193  8e-48  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0512673  normal 
 
 
-
 
NC_013174  Jden_0421  methyl-accepting chemotaxis sensory transducer  36.94 
 
 
623 aa  192  1e-47  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.308823 
 
 
-
 
NC_009656  PSPA7_4874  chemotactic transducer PctC  29.15 
 
 
632 aa  192  1e-47  Pseudomonas aeruginosa PA7  Bacteria  normal  0.153332  n/a   
 
 
-
 
NC_007963  Csal_0126  methyl-accepting chemotaxis sensory transducer  29.69 
 
 
613 aa  192  1e-47  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1066  methyl-accepting chemotaxis sensory transducer  28.74 
 
 
705 aa  192  1e-47  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_002967  TDE0640  methyl-accepting chemotaxis protein  27.49 
 
 
744 aa  192  2e-47  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  36.31 
 
 
689 aa  192  2e-47  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  30.11 
 
 
628 aa  191  2.9999999999999997e-47  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  29.25 
 
 
632 aa  191  2.9999999999999997e-47  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_013173  Dbac_1209  methyl-accepting chemotaxis sensory transducer  35.05 
 
 
560 aa  190  5e-47  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0163835  n/a   
 
 
-
 
NC_013521  Sked_32360  methyl-accepting chemotaxis protein  42.25 
 
 
530 aa  190  5.999999999999999e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_4113  methyl-accepting chemotaxis protein  28.12 
 
 
778 aa  190  7e-47  Agrobacterium vitis S4  Bacteria  normal  0.433818  n/a   
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  35.64 
 
 
565 aa  190  7e-47  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  39.81 
 
 
540 aa  189  1e-46  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  34.69 
 
 
562 aa  188  2e-46  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_009656  PSPA7_4877  chemotactic transducer PctB  29.07 
 
 
629 aa  188  3e-46  Pseudomonas aeruginosa PA7  Bacteria  normal  0.164155  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>