More than 300 homologs were found in PanDaTox collection
for query gene Amir_4184 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  100 
 
 
536 aa  1026    Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  45.51 
 
 
542 aa  365  1e-99  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_5008  methyl-accepting chemotaxis sensory transducer  50.73 
 
 
546 aa  358  9.999999999999999e-98  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_30950  methyl-accepting chemotaxis protein  43.55 
 
 
540 aa  334  2e-90  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.664181  normal 
 
 
-
 
NC_009664  Krad_4271  methyl-accepting chemotaxis sensory transducer  47.1 
 
 
535 aa  327  3e-88  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.79817  normal  0.653673 
 
 
-
 
NC_008699  Noca_1293  chemotaxis sensory transducer  43.36 
 
 
542 aa  314  2.9999999999999996e-84  Nocardioides sp. JS614  Bacteria  normal  0.320257  n/a   
 
 
-
 
NC_013093  Amir_1755  methyl-accepting chemotaxis sensory transducer  42.57 
 
 
538 aa  301  2e-80  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  58.49 
 
 
545 aa  300  6e-80  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  51.23 
 
 
518 aa  298  2e-79  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  50.98 
 
 
545 aa  272  1e-71  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  45.62 
 
 
528 aa  271  2.9999999999999997e-71  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  54.04 
 
 
533 aa  270  5.9999999999999995e-71  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_013521  Sked_30970  methyl-accepting chemotaxis protein  52.03 
 
 
562 aa  268  2e-70  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  44.71 
 
 
537 aa  266  5.999999999999999e-70  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  50.43 
 
 
522 aa  262  1e-68  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  50.74 
 
 
540 aa  259  1e-67  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_07600  methyl-accepting chemotaxis protein  52.99 
 
 
533 aa  258  2e-67  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0696595 
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  53.12 
 
 
538 aa  256  1.0000000000000001e-66  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  54.84 
 
 
538 aa  253  4.0000000000000004e-66  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_36620  methyl-accepting chemotaxis protein  50.94 
 
 
543 aa  251  2e-65  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0835028  normal  0.811978 
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  49.52 
 
 
904 aa  249  1e-64  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_013093  Amir_0199  methyl-accepting chemotaxis sensory transducer  44.5 
 
 
532 aa  246  9.999999999999999e-64  Actinosynnema mirum DSM 43827  Bacteria  normal  0.570256  n/a   
 
 
-
 
NC_013174  Jden_0421  methyl-accepting chemotaxis sensory transducer  46.99 
 
 
623 aa  243  9e-63  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.308823 
 
 
-
 
NC_013521  Sked_32360  methyl-accepting chemotaxis protein  50.14 
 
 
530 aa  242  1e-62  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  47.83 
 
 
531 aa  242  1e-62  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  51.9 
 
 
538 aa  239  1e-61  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  50.94 
 
 
540 aa  238  2e-61  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  52.17 
 
 
538 aa  238  2e-61  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_013093  Amir_0375  methyl-accepting chemotaxis sensory transducer  51.58 
 
 
544 aa  236  7e-61  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  57.2 
 
 
1150 aa  235  2.0000000000000002e-60  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_013174  Jden_1961  methyl-accepting chemotaxis sensory transducer  47.92 
 
 
535 aa  233  5e-60  Jonesia denitrificans DSM 20603  Bacteria  normal  0.286616  normal 
 
 
-
 
NC_013521  Sked_03110  methyl-accepting chemotaxis protein  47.77 
 
 
347 aa  232  1e-59  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0123169  normal 
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  45.64 
 
 
394 aa  231  2e-59  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  52.24 
 
 
858 aa  231  4e-59  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_009664  Krad_1613  methyl-accepting chemotaxis sensory transducer  47.47 
 
 
523 aa  229  7e-59  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00385179  normal 
 
 
-
 
NC_009664  Krad_1935  methyl-accepting chemotaxis sensory transducer  50.47 
 
 
530 aa  228  3e-58  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.376441  normal 
 
 
-
 
NC_013521  Sked_30940  methyl-accepting chemotaxis protein  45.83 
 
 
407 aa  225  2e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682285  normal 
 
 
-
 
NC_013521  Sked_30960  methyl-accepting chemotaxis protein  40.37 
 
 
540 aa  220  3.9999999999999997e-56  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  49.55 
 
 
547 aa  221  3.9999999999999997e-56  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4077  methyl-accepting chemotaxis sensory transducer  49.3 
 
 
545 aa  214  3.9999999999999995e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0049  methyl-accepting chemotaxis sensory transducer  43.95 
 
 
539 aa  214  3.9999999999999995e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0550535  normal  0.228084 
 
 
-
 
NC_013093  Amir_3089  methyl-accepting chemotaxis sensory transducer  40.7 
 
 
526 aa  213  5.999999999999999e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1914  methyl-accepting chemotaxis sensory transducer  45.97 
 
 
550 aa  212  1e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.37871  normal 
 
 
-
 
NC_009664  Krad_0651  methyl-accepting chemotaxis sensory transducer  46.89 
 
 
535 aa  211  3e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.406234  normal  0.0260089 
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  47.15 
 
 
535 aa  211  3e-53  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  45.31 
 
 
702 aa  209  1e-52  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_009664  Krad_1002  methyl-accepting chemotaxis sensory transducer  51.05 
 
 
529 aa  207  3e-52  Kineococcus radiotolerans SRS30216  Bacteria  normal  hitchhiker  0.00624598 
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  38.89 
 
 
686 aa  207  6e-52  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A3563  chemotaxis sensory transducer  36.42 
 
 
563 aa  206  9e-52  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  37.24 
 
 
561 aa  206  9e-52  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  36.93 
 
 
561 aa  206  1e-51  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  41.42 
 
 
561 aa  202  9.999999999999999e-51  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  36.31 
 
 
561 aa  202  9.999999999999999e-51  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_013093  Amir_4191  methyl-accepting chemotaxis sensory transducer  38.29 
 
 
538 aa  201  1.9999999999999998e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  38.07 
 
 
565 aa  201  1.9999999999999998e-50  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3504  methyl-accepting chemotaxis sensory transducer  42.61 
 
 
657 aa  201  3e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.193477  normal 
 
 
-
 
NC_013173  Dbac_0250  methyl-accepting chemotaxis sensory transducer  34.14 
 
 
554 aa  201  3e-50  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.000234986  n/a   
 
 
-
 
NC_013521  Sked_20550  methyl-accepting chemotaxis protein  41.74 
 
 
733 aa  200  5e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.375054  normal  0.44591 
 
 
-
 
NC_011757  Mchl_0679  methyl-accepting chemotaxis sensory transducer  40.2 
 
 
565 aa  200  7e-50  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0248904 
 
 
-
 
NC_009664  Krad_2460  methyl-accepting chemotaxis sensory transducer  50.88 
 
 
531 aa  200  7e-50  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  40.05 
 
 
572 aa  199  1.0000000000000001e-49  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_009664  Krad_1606  methyl-accepting chemotaxis sensory transducer  50.17 
 
 
545 aa  198  2.0000000000000003e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0156977  normal 
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  38.13 
 
 
560 aa  198  2.0000000000000003e-49  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_010172  Mext_0667  chemotaxis sensory transducer  39.95 
 
 
565 aa  197  3e-49  Methylobacterium extorquens PA1  Bacteria  normal  0.510632  normal  0.195802 
 
 
-
 
NC_008699  Noca_1783  chemotaxis sensory transducer  43.98 
 
 
515 aa  197  4.0000000000000005e-49  Nocardioides sp. JS614  Bacteria  normal  0.552405  n/a   
 
 
-
 
NC_009664  Krad_1913  methyl-accepting chemotaxis sensory transducer  44.98 
 
 
524 aa  196  6e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0934644  normal 
 
 
-
 
NC_013173  Dbac_1510  methyl-accepting chemotaxis sensory transducer with Cache sensor  31.97 
 
 
574 aa  195  2e-48  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00534894  n/a   
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  43.31 
 
 
715 aa  195  2e-48  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_013173  Dbac_1511  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.16 
 
 
574 aa  195  2e-48  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0260271  n/a   
 
 
-
 
NC_013174  Jden_0360  methyl-accepting chemotaxis sensory transducer  47.88 
 
 
544 aa  195  2e-48  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  40.76 
 
 
586 aa  195  2e-48  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_013173  Dbac_1209  methyl-accepting chemotaxis sensory transducer  36.96 
 
 
560 aa  194  2e-48  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0163835  n/a   
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  37.47 
 
 
561 aa  195  2e-48  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  36.11 
 
 
563 aa  194  3e-48  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2646  methyl-accepting chemotaxis sensory transducer  35.11 
 
 
625 aa  194  3e-48  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  49.01 
 
 
965 aa  194  3e-48  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_013521  Sked_30920  methyl-accepting chemotaxis protein  45.56 
 
 
583 aa  194  3e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  35.32 
 
 
562 aa  193  7e-48  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_011757  Mchl_5373  methyl-accepting chemotaxis sensory transducer  37.77 
 
 
565 aa  192  1e-47  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.620524  normal  0.472724 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  43.54 
 
 
608 aa  192  2e-47  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  37.82 
 
 
565 aa  192  2e-47  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  38.86 
 
 
566 aa  192  2e-47  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  37.69 
 
 
562 aa  191  2e-47  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.1 
 
 
558 aa  191  4e-47  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  40.82 
 
 
676 aa  189  7e-47  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_011894  Mnod_5243  methyl-accepting chemotaxis sensory transducer  37.26 
 
 
562 aa  189  1e-46  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  39.69 
 
 
561 aa  189  1e-46  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  40.69 
 
 
563 aa  189  2e-46  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_010511  M446_0370  methyl-accepting chemotaxis sensory transducer  40.79 
 
 
560 aa  188  2e-46  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.52335 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  39.29 
 
 
656 aa  188  2e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  37.12 
 
 
561 aa  188  2e-46  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_013173  Dbac_2858  methyl-accepting chemotaxis sensory transducer  39.39 
 
 
687 aa  187  3e-46  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4105  methyl-accepting chemotaxis sensory transducer  40.52 
 
 
561 aa  187  3e-46  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.916882  normal 
 
 
-
 
NC_013173  Dbac_1064  methyl-accepting chemotaxis sensory transducer  38.03 
 
 
573 aa  187  5e-46  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.223413  n/a   
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  36.19 
 
 
688 aa  187  5e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  40.86 
 
 
562 aa  187  5e-46  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  37.6 
 
 
566 aa  186  7e-46  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.06 
 
 
533 aa  186  1.0000000000000001e-45  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  37.28 
 
 
561 aa  186  1.0000000000000001e-45  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_007925  RPC_4147  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
694 aa  186  1.0000000000000001e-45  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
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