More than 300 homologs were found in PanDaTox collection
for query gene Krad_4271 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_4271  methyl-accepting chemotaxis sensory transducer  100 
 
 
535 aa  1006    Kineococcus radiotolerans SRS30216  Bacteria  normal  0.79817  normal  0.653673 
 
 
-
 
NC_013093  Amir_4184  methyl-accepting chemotaxis sensory transducer  47.1 
 
 
536 aa  348  1e-94  Actinosynnema mirum DSM 43827  Bacteria  normal  0.483396  n/a   
 
 
-
 
NC_013521  Sked_30950  methyl-accepting chemotaxis protein  42.94 
 
 
540 aa  289  9e-77  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.664181  normal 
 
 
-
 
NC_013174  Jden_0359  methyl-accepting chemotaxis sensory transducer  36.85 
 
 
542 aa  278  2e-73  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_5008  methyl-accepting chemotaxis sensory transducer  43.24 
 
 
546 aa  248  3e-64  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3602  chemotaxis sensory transducer  46.5 
 
 
518 aa  245  9.999999999999999e-64  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1755  methyl-accepting chemotaxis sensory transducer  39.93 
 
 
538 aa  241  2.9999999999999997e-62  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1293  chemotaxis sensory transducer  38.59 
 
 
542 aa  236  1.0000000000000001e-60  Nocardioides sp. JS614  Bacteria  normal  0.320257  n/a   
 
 
-
 
NC_009664  Krad_4449  methyl-accepting chemotaxis sensory transducer  47.46 
 
 
538 aa  235  2.0000000000000002e-60  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.018308  normal 
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  46.8 
 
 
540 aa  226  6e-58  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_30970  methyl-accepting chemotaxis protein  45.1 
 
 
562 aa  221  1.9999999999999999e-56  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  47.63 
 
 
535 aa  219  7e-56  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_0109  methyl-accepting chemotaxis sensory transducer  51.17 
 
 
528 aa  218  2.9999999999999998e-55  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.268294  n/a   
 
 
-
 
NC_013757  Gobs_5010  methyl-accepting chemotaxis sensory transducer  50 
 
 
538 aa  212  2e-53  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_30940  methyl-accepting chemotaxis protein  44.15 
 
 
407 aa  210  4e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.682285  normal 
 
 
-
 
NC_009664  Krad_2095  methyl-accepting chemotaxis sensory transducer  47 
 
 
538 aa  210  6e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_06110  methyl-accepting chemotaxis protein  47.19 
 
 
533 aa  209  7e-53  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.232988  normal 
 
 
-
 
NC_013521  Sked_32360  methyl-accepting chemotaxis protein  39.44 
 
 
530 aa  209  1e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2323  methyl-accepting chemotaxis sensory transducer  44.34 
 
 
545 aa  209  1e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05890  methyl-accepting chemotaxis protein  49.16 
 
 
538 aa  209  1e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.383381 
 
 
-
 
NC_009664  Krad_1613  methyl-accepting chemotaxis sensory transducer  47.65 
 
 
523 aa  207  3e-52  Kineococcus radiotolerans SRS30216  Bacteria  decreased coverage  0.00385179  normal 
 
 
-
 
NC_013521  Sked_32370  methyl-accepting chemotaxis protein  45.35 
 
 
531 aa  207  6e-52  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_2984  chemotaxis sensory transducer  39.94 
 
 
545 aa  205  1e-51  Nocardioides sp. JS614  Bacteria  normal  0.660626  n/a   
 
 
-
 
NC_013521  Sked_36620  methyl-accepting chemotaxis protein  49.33 
 
 
543 aa  205  1e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0835028  normal  0.811978 
 
 
-
 
NC_013093  Amir_2197  methyl-accepting chemotaxis sensory transducer  36.44 
 
 
522 aa  202  9e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03110  methyl-accepting chemotaxis protein  50.19 
 
 
347 aa  201  1.9999999999999998e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0123169  normal 
 
 
-
 
NC_013757  Gobs_5009  methyl-accepting chemotaxis sensory transducer  47.45 
 
 
537 aa  197  3e-49  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4077  methyl-accepting chemotaxis sensory transducer  45.77 
 
 
545 aa  195  2e-48  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_27420  methyl-accepting chemotaxis protein  49.33 
 
 
540 aa  194  3e-48  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.141989  normal 
 
 
-
 
NC_013521  Sked_07600  methyl-accepting chemotaxis protein  46.69 
 
 
533 aa  192  2e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0696595 
 
 
-
 
NC_013093  Amir_4191  methyl-accepting chemotaxis sensory transducer  37.48 
 
 
538 aa  190  7e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3321  methyl-accepting chemotaxis sensory transducer  46.74 
 
 
702 aa  189  1e-46  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.105528  n/a   
 
 
-
 
NC_008009  Acid345_1672  methyl-accepting chemotaxis sensory transducer  41.53 
 
 
904 aa  188  2e-46  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.707022 
 
 
-
 
NC_013093  Amir_0199  methyl-accepting chemotaxis sensory transducer  45.26 
 
 
532 aa  186  1.0000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  0.570256  n/a   
 
 
-
 
NC_009664  Krad_0651  methyl-accepting chemotaxis sensory transducer  42.52 
 
 
535 aa  185  2.0000000000000003e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.406234  normal  0.0260089 
 
 
-
 
NC_009664  Krad_3848  histidine kinase HAMP region domain protein  51.98 
 
 
733 aa  184  3e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.629022  normal  0.0726472 
 
 
-
 
NC_013521  Sked_30960  methyl-accepting chemotaxis protein  43.63 
 
 
540 aa  181  2e-44  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_1526  methyl-accepting chemotaxis sensory transducer  40.12 
 
 
858 aa  182  2e-44  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.787952  normal  0.35844 
 
 
-
 
NC_013174  Jden_1961  methyl-accepting chemotaxis sensory transducer  34.54 
 
 
535 aa  181  2.9999999999999997e-44  Jonesia denitrificans DSM 20603  Bacteria  normal  0.286616  normal 
 
 
-
 
NC_009664  Krad_1002  methyl-accepting chemotaxis sensory transducer  34.03 
 
 
529 aa  181  2.9999999999999997e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  hitchhiker  0.00624598 
 
 
-
 
NC_013093  Amir_0375  methyl-accepting chemotaxis sensory transducer  43.99 
 
 
544 aa  181  2.9999999999999997e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1914  methyl-accepting chemotaxis sensory transducer  37.78 
 
 
550 aa  179  1e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.37871  normal 
 
 
-
 
NC_013174  Jden_0360  methyl-accepting chemotaxis sensory transducer  41.33 
 
 
544 aa  179  1e-43  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0421  methyl-accepting chemotaxis sensory transducer  36.81 
 
 
623 aa  179  1e-43  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.308823 
 
 
-
 
NC_009664  Krad_0049  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
539 aa  179  1e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0550535  normal  0.228084 
 
 
-
 
NC_013174  Jden_1995  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
394 aa  179  2e-43  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3563  chemotaxis sensory transducer  32.03 
 
 
563 aa  178  2e-43  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0198  methyl-accepting chemotaxis sensory transducer  40.57 
 
 
715 aa  177  6e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.419669  n/a   
 
 
-
 
NC_008578  Acel_1751  methyl-accepting chemotaxis sensory transducer  44.15 
 
 
547 aa  176  7e-43  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A1293  methyl-accepting chemotaxis sensory transducer  31.77 
 
 
562 aa  176  9.999999999999999e-43  Rhodospirillum rubrum ATCC 11170  Bacteria  decreased coverage  0.00511002  n/a   
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  37.82 
 
 
1150 aa  176  9.999999999999999e-43  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_009664  Krad_2460  methyl-accepting chemotaxis sensory transducer  42.16 
 
 
531 aa  175  1.9999999999999998e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1783  chemotaxis sensory transducer  44.03 
 
 
515 aa  174  2.9999999999999996e-42  Nocardioides sp. JS614  Bacteria  normal  0.552405  n/a   
 
 
-
 
NC_013124  Afer_0753  methyl-accepting chemotaxis sensory transducer  46.15 
 
 
558 aa  173  5.999999999999999e-42  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.75846  n/a   
 
 
-
 
NC_009664  Krad_1935  methyl-accepting chemotaxis sensory transducer  42.37 
 
 
530 aa  172  2e-41  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.376441  normal 
 
 
-
 
NC_013521  Sked_30920  methyl-accepting chemotaxis protein  45.56 
 
 
583 aa  171  3e-41  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0026  methyl-accepting chemotaxis sensory transducer  33.95 
 
 
686 aa  170  5e-41  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1606  methyl-accepting chemotaxis sensory transducer  42.62 
 
 
545 aa  169  1e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0156977  normal 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  33.81 
 
 
656 aa  169  1e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3504  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
657 aa  169  2e-40  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.193477  normal 
 
 
-
 
NC_007643  Rru_A2554  methyl-accepting chemotaxis sensory transducer  34.47 
 
 
644 aa  167  2.9999999999999998e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0186678  n/a   
 
 
-
 
NC_007643  Rru_A2484  chemotaxis sensory transducer  34.41 
 
 
563 aa  167  4e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.1562  n/a   
 
 
-
 
NC_007958  RPD_0153  chemotaxis sensory transducer  34.47 
 
 
602 aa  167  5.9999999999999996e-40  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1148  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.51 
 
 
650 aa  165  2.0000000000000002e-39  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.605213  n/a   
 
 
-
 
NC_009664  Krad_1913  methyl-accepting chemotaxis sensory transducer  41.14 
 
 
524 aa  164  4.0000000000000004e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0934644  normal 
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  36.7 
 
 
689 aa  164  5.0000000000000005e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  43.63 
 
 
561 aa  164  5.0000000000000005e-39  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_013173  Dbac_1511  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.39 
 
 
574 aa  164  5.0000000000000005e-39  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0260271  n/a   
 
 
-
 
NC_007778  RPB_4286  methyl-accepting chemotaxis sensory transducer  33.68 
 
 
563 aa  163  7e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0127  methyl-accepting chemotaxis sensory transducer  43.05 
 
 
397 aa  163  9e-39  Acidothermus cellulolyticus 11B  Bacteria  normal  0.362921  normal 
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  38.12 
 
 
561 aa  161  2e-38  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5110  hypothetical protein  37.98 
 
 
688 aa  162  2e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.791751 
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.18 
 
 
533 aa  161  3e-38  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  35.12 
 
 
562 aa  160  4e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_007958  RPD_0995  chemotaxis sensory transducer  35.83 
 
 
656 aa  160  4e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.880627  normal 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  38.25 
 
 
561 aa  160  4e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  40.85 
 
 
562 aa  160  5e-38  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  35.23 
 
 
565 aa  160  6e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_013173  Dbac_1510  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.06 
 
 
574 aa  159  9e-38  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00534894  n/a   
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  36.79 
 
 
565 aa  159  1e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2366  methyl-accepting chemotaxis sensory transducer  38.86 
 
 
560 aa  159  1e-37  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.196109  n/a   
 
 
-
 
NC_014148  Plim_1909  chemotaxis sensory transducer  44.16 
 
 
965 aa  159  1e-37  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.11776  n/a   
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  41.27 
 
 
562 aa  159  1e-37  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.44 
 
 
716 aa  159  1e-37  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0525  methyl-accepting chemotaxis sensory transducer  39.34 
 
 
663 aa  158  2e-37  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00859167 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  37.99 
 
 
741 aa  159  2e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_013173  Dbac_2646  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
625 aa  157  3e-37  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
681 aa  157  4e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  44.16 
 
 
573 aa  157  4e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_009485  BBta_0885  putative methyl-accepting chemotaxis protein  42.11 
 
 
691 aa  157  5.0000000000000005e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.493714  normal 
 
 
-
 
NC_013173  Dbac_0250  methyl-accepting chemotaxis sensory transducer  34.45 
 
 
554 aa  157  6e-37  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.000234986  n/a   
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  39.27 
 
 
562 aa  157  6e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  32.1 
 
 
561 aa  156  7e-37  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  34.16 
 
 
697 aa  157  7e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_2653  methyl-accepting chemotaxis sensory transducer  43.43 
 
 
691 aa  156  8e-37  Rhodopseudomonas palustris HaA2  Bacteria  decreased coverage  0.00184965  normal  0.0777916 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  35.28 
 
 
565 aa  156  8e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  37 
 
 
688 aa  156  9e-37  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  36.22 
 
 
565 aa  156  9e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  35.73 
 
 
656 aa  156  9e-37  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_009485  BBta_0865  methyl-accepting chemotaxis sensory transducer  46.08 
 
 
712 aa  155  1e-36  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.163995 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>