Gene Rru_A2546 details

Gene Information

• Locus tag: Rru_A2546
• ID: 3835980
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 2959802
• End bp: 2961874
• Gene Length: 2073 bp
• Protein Length: 690 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637826654
• Product: chemotaxis sensory transducer
• Protein accession: YP_427633
• Protein GI: 83593881
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCATTC TGTTTGGGAC CATTCGGAAG CAAATCCTGA TCCCGCTGGT TGGGGTTATT 
ACGATCGGCA TGGTGGCGAT CACCTTTTAC GCTTCGATTG TCCAATTCGA TGCCGCCCGG 
GAGGCTGGCT ATCAAGTCAT GCTCGAGCAA TCGCGGGCCG AGGCCAATAC GGTCAGCCAT 
CTTTTGGATG AGGCCTTGAC CACCGTTCGG ACCAATGCCG ATTGGGCGCG ATCTTTCGCT 
TTGGGCGACT CCTTTGATCG CCAGGGGTTC GCCCAGGCGC TGCTCCAGGT CTTGCGCAGT 
TCTCCGGCCT TGACCGGTGT CTACGCGGGG TTCGAGCCGA ACTTCGATGG TCGGGATGCC 
GATCATGCCA AAACGGCCCT CGGCGATGAC ACGGGCCGGT TCCTGATCTA TGCCTATCGC 
GCCAACGACA CGGAAACCCT GGCCATCACG CCGCTGACCG GCGATCCGGC GGAAGAGAAC 
TGGTATTATC GGCCGTTGCG CGACAAGCGC GAGTCCATCA CCCCTCCCTA TGAGTTCGAG 
GTCGATGGGC ATCGCTTCCT GATGTCGACG GTGGTCGTTC CCATCCTCAA GGACGGCAAG 
GCCCTGGGCG TGGCCACGGC CGATGTCGGG CTTGATCGCA TCGCCCAGGA GGTGTCCCGT 
CTCAAGCCGA TGGGCGTGGG TTATGCGGTG GTGGTGTCGG CCGATGGTCA ATGGGTGGCC 
GCCCCGCGGC CGGAGCTTTT GGGAAAGCCG GTCGACGACC CGGCGTTTCG CGAGGCTTTG 
GACAAGATCA AAGACGCCGA GGTCCAAAAG ACGGTTTTCA CCGATTCCCT GACCGGGGAG 
AAATCGGTGA TGGTGATGGT GCCCATTCGC ATCGGCCGCG CCGCCGAGAC CTGGGGCATC 
GCCATGGTCG TGCCCGAGGC CGCCCTTCTC GCCGAGGCCT CGGCCGCGCG GATCCGCCTG 
ATCCTGGTGG GGCTGGGGAT TTTGCTGGCG GCGGCGCTGA CGGCGGTTCT GGTTGGCAAC 
GCCATCGTCC GACCGGTGCG CGATATGACC CAGGCCATGA CGCGGCTGGC CGAGGGGGCC 
CTGGGGGTGA GCGTGCCCGG AACCGATCGC CGCGACGAGA TCGGCGCCAT GTCCAAGGCG 
GTGAGGATCT TCAAGGATAA CGCCGCCGCC ATGCTGGAGA TGAGCCGCAA GTCGGAAAGC 
CTTGAGCGCG AGGCCCAGGA AAGCCGGCGG CAGGCGCAAG CGCGTTTGGC CGACCGCTTC 
GAAGGCGAGG TCGCCGCGAT GATCCATGTT CTTGGCGAGG CCGCTTCCGG CTTGCGCGAG 
CAGGCCCAGA TCATGACCGA TACCGCCCAG ACGGTGGCGA CCCATGCCGC CACCGTCGAC 
GCCGCCGCCG GCCAGACTTC GGCCAATGTT CAGACCGTCG CCTCGGCCAG CGAGGAATTG 
GCCTCTTCCA TCGGCGAAAT CAGCCGTCAG GTCGGTCAAT CAAGCAGCGT CGCCGCCGAT 
GCGGTTCGTC AGGTCGAACA GAGCCAGCAG ACCATCGTGG CGCTGGAGCG ATCCGCCCTG 
CGGATCGGCG AGGTGGTGAC CTTGATCAAT ACCATCGCCA GCCAGACCAA TCTTCTGGCG 
CTGAATGCGA CGATCGAGGC GGCGCGGGCC GGCGATGCCG GCAAGGGCTT CGCCGTGGTC 
GCCGGCGAGG TCAAGGCCCT GGCCAATCAA ACGGCGCGGG CCACCGAGGA AATCGTCGGT 
CAGATCGGAT CTGTTCAGGC GGGCACCCGC GATGTCGTCG CCGCGATCTC GATGATCTCG 
ACGACGATCG AATCCATGAG CCAGATTTCG ACCCAGATCG CCGGAGCCGT CGAGGAACAG 
GCCGCCGCCA CCCAGGAAAT CACCCGCTCG GTGCAGCAGG TCGCCCAAGG CACGCAAACG 
GTGACCGAGG CCATCTCGGA TGTTTACTCG GGCACCGTGA AGAATGGCGA CCACGCCCGG 
GTGGTCCATC GCACCGCCGA ACAAGTGGCC GAGGACGCCA AGGGGCTTGC CCACAAGGTG 
AACGACTTTC TGGCCGATAT CCGGGGCGGG TGA 

 

Protein sequence

MGILFGTIRK QILIPLVGVI TIGMVAITFY ASIVQFDAAR EAGYQVMLEQ SRAEANTVSH 
LLDEALTTVR TNADWARSFA LGDSFDRQGF AQALLQVLRS SPALTGVYAG FEPNFDGRDA 
DHAKTALGDD TGRFLIYAYR ANDTETLAIT PLTGDPAEEN WYYRPLRDKR ESITPPYEFE 
VDGHRFLMST VVVPILKDGK ALGVATADVG LDRIAQEVSR LKPMGVGYAV VVSADGQWVA 
APRPELLGKP VDDPAFREAL DKIKDAEVQK TVFTDSLTGE KSVMVMVPIR IGRAAETWGI 
AMVVPEAALL AEASAARIRL ILVGLGILLA AALTAVLVGN AIVRPVRDMT QAMTRLAEGA 
LGVSVPGTDR RDEIGAMSKA VRIFKDNAAA MLEMSRKSES LEREAQESRR QAQARLADRF 
EGEVAAMIHV LGEAASGLRE QAQIMTDTAQ TVATHAATVD AAAGQTSANV QTVASASEEL 
ASSIGEISRQ VGQSSSVAAD AVRQVEQSQQ TIVALERSAL RIGEVVTLIN TIASQTNLLA 
LNATIEAARA GDAGKGFAVV AGEVKALANQ TARATEEIVG QIGSVQAGTR DVVAAISMIS 
TTIESMSQIS TQIAGAVEEQ AAATQEITRS VQQVAQGTQT VTEAISDVYS GTVKNGDHAR 
VVHRTAEQVA EDAKGLAHKV NDFLADIRGG