More than 300 homologs were found in PanDaTox collection
for query gene Daci_3380 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010002  Daci_3380  two component LuxR family transcriptional regulator  100 
 
 		 259 aa  528  1e-149  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.277634 
 
 
-
 
NC_011992  Dtpsy_1772  two component transcriptional regulator, LuxR family  80.52 
 
 		 262 aa  386  1e-106  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_2543  two component LuxR family transcriptional regulator  70.31 
 
 		 230 aa  339  2e-92  Polaromonas sp. JS666  Bacteria  normal  0.149636  normal  0.0443917 
 
 
-
 
NC_008781  Pnap_1851  two component LuxR family transcriptional regulator  65.38 
 
 		 262 aa  323  2e-87  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.467917  normal  0.53175 
 
 
-
 
NC_008781  Pnap_3628  two component LuxR family transcriptional regulator  60.91 
 
 		 292 aa  305  4.0000000000000004e-82  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.350857 
 
 
-
 
NC_012791  Vapar_3199  two component transcriptional regulator, LuxR family  50.58 
 
 		 262 aa  251  6e-66  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_0804  two component LuxR family transcriptional regulator  37.44 
 
 		 229 aa  128  8.000000000000001e-29  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  36.23 
 
 		 211 aa  127  1.0000000000000001e-28  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_4084  two component LuxR family transcriptional regulator  31.78 
 
 		 246 aa  125  7e-28  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  33.81 
 
 		 253 aa  125  9e-28  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  34.11 
 
 		 213 aa  124  1e-27  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A3237  response regulator  33.64 
 
 		 219 aa  125  1e-27  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  35.11 
 
 		 234 aa  123  3e-27  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  35.21 
 
 		 234 aa  122  5e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_007974  Rmet_5165  two component LuxR family transcriptional regulator  34.8 
 
 		 231 aa  121  9.999999999999999e-27  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.162111 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  36.77 
 
 		 224 aa  121  9.999999999999999e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal  1 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  38.71 
 
 		 216 aa  120  1.9999999999999998e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  35.21 
 
 		 219 aa  119  3.9999999999999996e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  36.16 
 
 		 227 aa  119  3.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_003295  RSc3161  two component response regulator transcription regulator protein  32.76 
 
 		 231 aa  119  6e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_0377  two component LuxR family transcriptional regulator  35.81 
 
 		 245 aa  118  7e-26  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  34.27 
 
 		 242 aa  119  7e-26  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007974  Rmet_4986  two component LuxR family transcriptional regulator  33.63 
 
 		 237 aa  118  9e-26  Cupriavidus metallidurans CH34  Bacteria  normal  0.170484  normal  0.313407 
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  38.18 
 
 		 229 aa  117  9.999999999999999e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal  1 
 
 
-
 
NC_010524  Lcho_3952  two component LuxR family transcriptional regulator  31.05 
 
 		 222 aa  117  9.999999999999999e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.173353 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  37.74 
 
 		 222 aa  117  1.9999999999999998e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_013739  Cwoe_0163  two component transcriptional regulator, LuxR family  33.94 
 
 		 213 aa  117  1.9999999999999998e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.107009  normal  1 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  36.94 
 
 		 225 aa  117  1.9999999999999998e-25  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  33.03 
 
 		 218 aa  116  3e-25  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013235  Namu_1255  two component transcriptional regulator, LuxR family  35.78 
 
 		 219 aa  115  5e-25  Nakamurella multipartita DSM 44233  Bacteria  normal  0.490147  normal  0.40644 
 
 
-
 
NC_012791  Vapar_0939  two component transcriptional regulator, LuxR family  32.14 
 
 		 247 aa  115  6.9999999999999995e-25  Variovorax paradoxus S110  Bacteria  normal  0.224899  n/a   
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  37.04 
 
 		 212 aa  115  7.999999999999999e-25  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  35.78 
 
 		 207 aa  115  7.999999999999999e-25  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.966789 
 
 
-
 
NC_013757  Gobs_4437  two component transcriptional regulator, LuxR family  35.94 
 
 		 218 aa  114  1.0000000000000001e-24  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.784745  n/a   
 
 
-
 
NC_010725  Mpop_0347  two component transcriptional regulator, LuxR family  34.23 
 
 		 222 aa  114  1.0000000000000001e-24  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_3373  two component LuxR family transcriptional regulator  31.06 
 
 		 262 aa  114  2.0000000000000002e-24  Rhodoferax ferrireducens T118  Bacteria  normal  0.492418  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  34.88 
 
 		 228 aa  114  2.0000000000000002e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_6085  two component transcriptional regulator, LuxR family  36.28 
 
 		 217 aa  114  2.0000000000000002e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  30.84 
 
 		 228 aa  112  4.0000000000000004e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  33.18 
 
 		 215 aa  112  5e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  35.44 
 
 		 234 aa  112  5e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.683883 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  37.21 
 
 		 210 aa  112  5e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  34.09 
 
 		 237 aa  112  6e-24  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  34.06 
 
 		 231 aa  112  7.000000000000001e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  33.79 
 
 		 234 aa  112  8.000000000000001e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  34.91 
 
 		 217 aa  111  9e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  34.93 
 
 		 213 aa  112  9e-24  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  36 
 
 		 224 aa  111  1.0000000000000001e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.18 
 
 		 221 aa  111  1.0000000000000001e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.133182 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.46 
 
 		 222 aa  111  1.0000000000000001e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_014148  Plim_0373  response regulator receiver  31.46 
 
 		 220 aa  111  1.0000000000000001e-23  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.22 
 
 		 230 aa  111  1.0000000000000001e-23  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  36.28 
 
 		 228 aa  111  1.0000000000000001e-23  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  34.11 
 
 		 214 aa  110  2.0000000000000002e-23  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  30.59 
 
 		 231 aa  110  2.0000000000000002e-23  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_25620  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.31 
 
 		 219 aa  110  2.0000000000000002e-23  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.263807 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  32.71 
 
 		 303 aa  110  2.0000000000000002e-23  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  28.57 
 
 		 216 aa  110  2.0000000000000002e-23  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_4735  two component LuxR family transcriptional regulator  31.55 
 
 		 209 aa  110  2.0000000000000002e-23  Flavobacterium johnsoniae UW101  Bacteria  normal  0.545478  n/a   
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  34.74 
 
 		 233 aa  110  3e-23  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  34.43 
 
 		 220 aa  110  3e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_3437  two component transcriptional regulator, LuxR family  29.18 
 
 		 248 aa  110  3e-23  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.39912  n/a   
 
 
-
 
NC_007802  Jann_3515  two component LuxR family transcriptional regulator  32.86 
 
 		 214 aa  109  4.0000000000000004e-23  Jannaschia sp. CCS1  Bacteria  normal  0.150532  hitchhiker  0.00248481 
 
 
-
 
NC_011757  Mchl_1985  two component transcriptional regulator, LuxR family  33.33 
 
 		 222 aa  109  4.0000000000000004e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  36.32 
 
 		 223 aa  109  4.0000000000000004e-23  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  33.33 
 
 		 207 aa  109  5e-23  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.296562 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  34.82 
 
 		 230 aa  109  5e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  36.07 
 
 		 220 aa  108  6e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_1523  response regulator receiver protein  35.02 
 
 		 215 aa  108  6e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.894169  normal  0.0152488 
 
 
-
 
NC_009380  Strop_3824  response regulator receiver  36.28 
 
 		 228 aa  109  6e-23  Salinispora tropica CNB-440  Bacteria  normal  0.206519  normal  1 
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  33.64 
 
 		 223 aa  108  6e-23  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  32.56 
 
 		 209 aa  108  7.000000000000001e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  31.92 
 
 		 209 aa  108  7.000000000000001e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_013947  Snas_1509  two component transcriptional regulator, LuxR family  33.02 
 
 		 221 aa  108  7.000000000000001e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.198395  normal  0.0597777 
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  37.1 
 
 		 214 aa  108  7.000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_1668  response regulator receiver  33.33 
 
 		 222 aa  108  8.000000000000001e-23  Methylobacterium extorquens PA1  Bacteria  normal  0.679138  normal  1 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  34.13 
 
 		 213 aa  108  8.000000000000001e-23  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_008825  Mpe_A3621  response regulatory protein  33.19 
 
 		 243 aa  108  8.000000000000001e-23  Methylibium petroleiphilum PM1  Bacteria  normal  0.0192509  normal  0.145723 
 
 
-
 
NC_013174  Jden_0656  two component transcriptional regulator, LuxR family  35.16 
 
 		 218 aa  108  1e-22  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.214241 
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  34.72 
 
 		 207 aa  108  1e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal  1 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  34.68 
 
 		 226 aa  108  1e-22  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013947  Snas_3714  two component transcriptional regulator, LuxR family  33.8 
 
 		 225 aa  107  1e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.176655 
 
 
-
 
NC_007947  Mfla_0447  two component LuxR family transcriptional regulator  35.29 
 
 		 244 aa  108  1e-22  Methylobacillus flagellatus KT  Bacteria  normal  0.013193  normal  0.6128 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  36.57 
 
 		 220 aa  108  1e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  34.91 
 
 		 213 aa  107  1e-22  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  28.37 
 
 		 208 aa  108  1e-22  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.27 
 
 		 229 aa  107  1e-22  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  34.09 
 
 		 221 aa  107  2e-22  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  32.73 
 
 		 237 aa  107  2e-22  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013132  Cpin_4160  two component transcriptional regulator, LuxR family  31.28 
 
 		 215 aa  107  2e-22  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0201669  normal  0.0925574 
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  30.84 
 
 		 219 aa  107  2e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008541  Arth_2998  two component LuxR family transcriptional regulator  35.27 
 
 		 228 aa  107  2e-22  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  37.33 
 
 		 218 aa  107  2e-22  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  34.56 
 
 		 216 aa  107  2e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  33.83 
 
 		 218 aa  107  2e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  31.67 
 
 		 228 aa  107  3e-22  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  35.75 
 
 		 225 aa  106  3e-22  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  33.63 
 
 		 224 aa  106  3e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.98 
 
 		 226 aa  106  3e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  33.93 
 
 		 228 aa  106  4e-22  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
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