More than 300 homologs were found in PanDaTox collection
for query gene Mext_1668 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010172  Mext_1668  response regulator receiver  100 
 
 		 222 aa  451  1.0000000000000001e-126  Methylobacterium extorquens PA1  Bacteria  normal  0.679138  normal  1 
 
 
-
 
NC_011757  Mchl_1985  two component transcriptional regulator, LuxR family  99.55 
 
 		 222 aa  449  1e-125  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_0347  two component transcriptional regulator, LuxR family  97.75 
 
 		 222 aa  439  9.999999999999999e-123  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  46.45 
 
 		 223 aa  208  6e-53  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  44.24 
 
 		 220 aa  179  2e-44  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  42.92 
 
 		 222 aa  174  9.999999999999999e-43  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_010172  Mext_4343  response regulator receiver  40.61 
 
 		 236 aa  166  4e-40  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_4712  two component transcriptional regulator, LuxR family  40.61 
 
 		 236 aa  166  4e-40  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.37561  normal  1 
 
 
-
 
NC_007958  RPD_3789  response regulator receiver  40.74 
 
 		 228 aa  163  2.0000000000000002e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0916709 
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  42.72 
 
 		 223 aa  159  2e-38  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007778  RPB_4035  two component LuxR family transcriptional regulator  40.19 
 
 		 228 aa  159  3e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_0851  two component transcriptional regulator, LuxR family  40.28 
 
 		 232 aa  159  4e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_4860  two component transcriptional regulator, LuxR family  39.73 
 
 		 236 aa  159  5e-38  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.142587 
 
 
-
 
NC_011004  Rpal_1676  two component transcriptional regulator, LuxR family  39.72 
 
 		 228 aa  157  1e-37  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_3079  two component LuxR family transcriptional regulator  38.68 
 
 		 233 aa  156  2e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_3790  two component LuxR family transcriptional regulator  38.68 
 
 		 226 aa  156  3e-37  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  34.76 
 
 		 215 aa  155  4e-37  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_4449  two component LuxR family transcriptional regulator  35.94 
 
 		 230 aa  154  1e-36  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.683214 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  39.35 
 
 		 221 aa  152  4e-36  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_2401  response regulator receiver  35.75 
 
 		 230 aa  152  4e-36  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0808908 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  38.86 
 
 		 218 aa  144  7.0000000000000006e-34  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  38.86 
 
 		 218 aa  144  7.0000000000000006e-34  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  37.44 
 
 		 218 aa  142  3e-33  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  35.41 
 
 		 215 aa  138  6e-32  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_3163  two component LuxR family transcriptional regulator  34.12 
 
 		 203 aa  136  2e-31  Pelobacter propionicus DSM 2379  Bacteria  normal  0.932633  n/a   
 
 
-
 
NC_011004  Rpal_3423  two component transcriptional regulator, LuxR family  33.33 
 
 		 235 aa  136  3.0000000000000003e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.324081  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  33.65 
 
 		 212 aa  135  3.0000000000000003e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  36.49 
 
 		 213 aa  135  4e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  35.85 
 
 		 218 aa  135  7.000000000000001e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  36.45 
 
 		 213 aa  133  1.9999999999999998e-30  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  33.49 
 
 		 213 aa  133  3e-30  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  36.19 
 
 		 216 aa  132  3e-30  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  33.49 
 
 		 214 aa  132  3.9999999999999996e-30  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  36.19 
 
 		 216 aa  132  6e-30  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  33.65 
 
 		 206 aa  131  7.999999999999999e-30  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  33.49 
 
 		 217 aa  131  9e-30  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  31.46 
 
 		 224 aa  129  2.0000000000000002e-29  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  34.51 
 
 		 241 aa  130  2.0000000000000002e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  34.29 
 
 		 216 aa  129  3e-29  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  31.34 
 
 		 218 aa  129  4.0000000000000003e-29  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  32.54 
 
 		 216 aa  129  4.0000000000000003e-29  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  35.07 
 
 		 222 aa  128  6e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  30.99 
 
 		 218 aa  128  7.000000000000001e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  28.86 
 
 		 208 aa  127  1.0000000000000001e-28  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  33.65 
 
 		 220 aa  127  2.0000000000000002e-28  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  31.78 
 
 		 217 aa  127  2.0000000000000002e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  35.05 
 
 		 228 aa  126  3e-28  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_12780  putative two-component response regulator  34.12 
 
 		 209 aa  126  3e-28  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000000000436161  normal  1 
 
 
-
 
NC_010571  Oter_1700  two component LuxR family transcriptional regulator  32.85 
 
 		 213 aa  126  3e-28  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.226192 
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  30.41 
 
 		 217 aa  125  4.0000000000000003e-28  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  30.41 
 
 		 217 aa  125  4.0000000000000003e-28  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  31.94 
 
 		 232 aa  125  6e-28  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_007614  Nmul_A1235  two component LuxR family transcriptional regulator  33.82 
 
 		 211 aa  125  7e-28  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  30.99 
 
 		 224 aa  124  8.000000000000001e-28  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_007614  Nmul_A1336  two component LuxR family transcriptional regulator  31.73 
 
 		 208 aa  124  1e-27  Nitrosospira multiformis ATCC 25196  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  34.63 
 
 		 213 aa  124  1e-27  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  31.46 
 
 		 214 aa  124  1e-27  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  31.75 
 
 		 232 aa  124  1e-27  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2782  two component LuxR family transcriptional regulator  33.81 
 
 		 214 aa  124  1e-27  Geobacter uraniireducens Rf4  Bacteria  normal  0.834695  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  35.48 
 
 		 221 aa  123  2e-27  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  34.62 
 
 		 212 aa  123  2e-27  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010644  Emin_0306  two component LuxR family transcriptional regulator  32.24 
 
 		 215 aa  122  3e-27  Elusimicrobium minutum Pei191  Bacteria  unclonable  0.000000000161342  hitchhiker  0.00000159266 
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  31.43 
 
 		 226 aa  122  3e-27  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009656  PSPA7_1160  putative two-component response regulator  34.31 
 
 		 209 aa  122  3e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0122525  n/a   
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  32.06 
 
 		 207 aa  122  4e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  33.33 
 
 		 216 aa  122  4e-27  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  30.52 
 
 		 224 aa  122  5e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  30.52 
 
 		 224 aa  122  5e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  31.92 
 
 		 232 aa  122  5e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  33.81 
 
 		 209 aa  122  5e-27  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  33.81 
 
 		 214 aa  122  6e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  32.21 
 
 		 217 aa  122  6e-27  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  29.73 
 
 		 215 aa  121  8e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008609  Ppro_2713  two component LuxR family transcriptional regulator  33.81 
 
 		 208 aa  121  8e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1782  two component LuxR family transcriptional regulator  32.56 
 
 		 214 aa  121  9e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000360675 
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  34.74 
 
 		 212 aa  120  9.999999999999999e-27  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  29.76 
 
 		 221 aa  121  9.999999999999999e-27  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_2482  two component transcriptional regulator, LuxR family  35.07 
 
 		 211 aa  120  9.999999999999999e-27  Dickeya dadantii Ech703  Bacteria  normal  0.46622  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  29.49 
 
 		 215 aa  120  1.9999999999999998e-26  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_2449  two component LuxR family transcriptional regulator  34.47 
 
 		 211 aa  120  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.265588 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  34.27 
 
 		 219 aa  120  1.9999999999999998e-26  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_1369  two component transcriptional regulator, LuxR family  32.27 
 
 		 218 aa  120  1.9999999999999998e-26  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.380225  n/a   
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  31.16 
 
 		 217 aa  120  1.9999999999999998e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_010814  Glov_1561  two component transcriptional regulator, LuxR family  30.33 
 
 		 199 aa  120  1.9999999999999998e-26  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_013522  Taci_1568  two component transcriptional regulator, LuxR family  32.72 
 
 		 211 aa  119  3e-26  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B5451  two component LuxR family transcriptional regulator  31.28 
 
 		 223 aa  119  3e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.761649  n/a   
 
 
-
 
NC_010571  Oter_0043  two component LuxR family transcriptional regulator  29.58 
 
 		 234 aa  119  3.9999999999999996e-26  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.14113 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  34.3 
 
 		 218 aa  119  3.9999999999999996e-26  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  32.56 
 
 		 216 aa  119  3.9999999999999996e-26  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal  1 
 
 
-
 
NC_013501  Rmar_1122  two component transcriptional regulator, LuxR family  30.84 
 
 		 234 aa  119  4.9999999999999996e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  0.752968  n/a   
 
 
-
 
NC_012918  GM21_1971  two component transcriptional regulator, LuxR family  32.7 
 
 		 216 aa  119  4.9999999999999996e-26  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008709  Ping_1192  transcriptional regulator of LuxR family protein  30.33 
 
 		 214 aa  119  4.9999999999999996e-26  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0907  LuxR family two component transcriptional regulator  33.65 
 
 		 197 aa  119  4.9999999999999996e-26  Thermobispora bispora DSM 43833  Bacteria  normal  0.365102  normal  1 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.13 
 
 		 215 aa  118  6e-26  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_002939  GSU0682  LuxR family DNA-binding response regulator  33.64 
 
 		 215 aa  118  7e-26  Geobacter sulfurreducens PCA  Bacteria  normal  0.874366  n/a   
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  37.31 
 
 		 212 aa  118  7.999999999999999e-26  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  33.17 
 
 		 213 aa  117  9.999999999999999e-26  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0919  two component LuxR family transcriptional regulator  28.57 
 
 		 214 aa  117  9.999999999999999e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  36.82 
 
 		 212 aa  117  9.999999999999999e-26  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.967001 
 
 
-
 
NC_009456  VC0395_0622  transcriptional regulator UhpA  32.85 
 
 		 208 aa  117  9.999999999999999e-26  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
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